* Select the new profile with eselect
* Re-emerge, in this sequence, gcc, binutils, and glibc
    emerge -1 sys-devel/gcc:6.4.0
    emerge -1 sys-devel/binutils
    emerge -1 sys-libs/glibc
* Rebuild your entire system
    emerge -e @world

Would emerge -e --exclude gcc --exclude bintuils --exclude glibc @world be a little more sensible?