https://wiki.gentoo.org/wiki/Kernel/Upgrade Sanitize sources If you just want to rebuild the current kernel, you need sometimes to sanitize the kernel sources: |root # ||make distclean| Interesting option. Wish it had said it would nuke my .config as well. Just finished setting it up. Thought I'd follow the advice given before rebuilding the kernel. Should've backed up the .config file prior to running 'make distclean'. Lesson learnt. :'(