From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1Qbr9U-0002yu-IL for garchives@archives.gentoo.org; Wed, 29 Jun 2011 09:33:44 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 8BCE41C021; Wed, 29 Jun 2011 09:32:05 +0000 (UTC) Received: from mta-1.ms.rz.rwth-aachen.de (mta-1.ms.rz.RWTH-Aachen.DE [134.130.7.72]) by pigeon.gentoo.org (Postfix) with ESMTP id 52B3F1C021 for ; Wed, 29 Jun 2011 09:32:05 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-user@lists.gentoo.org Reply-to: gentoo-user@lists.gentoo.org MIME-version: 1.0 Content-transfer-encoding: 7BIT Content-disposition: inline Content-type: text/plain; charset=us-ascii Received: from ironport-out-1.rz.rwth-aachen.de ([134.130.5.40]) by mta-1.ms.rz.RWTH-Aachen.de (Sun Java(tm) System Messaging Server 6.3-7.04 (built Sep 26 2008)) with ESMTP id <0LNJ00A0EP5G0CN0@mta-1.ms.rz.RWTH-Aachen.de> for gentoo-user@lists.gentoo.org; Wed, 29 Jun 2011 11:32:04 +0200 (CEST) X-IronPort-AV: E=Sophos;i="4.65,442,1304287200"; d="scan'208";a="121709786" Received: from relay-2.ms.rz.rwth-aachen.de (HELO relay.rwth-aachen.de) ([134.130.7.75]) by ironport-in-1.rz.rwth-aachen.de with ESMTP; Wed, 29 Jun 2011 11:32:04 +0200 Received: from numa-i.igpm.rwth-aachen.de (numa-i.igpm.RWTH-Aachen.DE [134.130.161.252]) by relay.rwth-aachen.de (8.14.4+Sun/8.13.8/1) with ESMTP id p5T9W4g4001214 for ; Wed, 29 Jun 2011 11:32:04 +0200 (CEST) Received: from numa-i (localhost [127.0.0.1]) by numa-i.igpm.rwth-aachen.de (Postfix) with ESMTP id F1D3B15CB for ; Wed, 29 Jun 2011 11:32:05 +0200 (CEST) Date: Wed, 29 Jun 2011 11:32:05 +0200 From: Helmut Jarausch Subject: [gentoo-user] dev-lang/R installation : a hard nut To: gentoo-user@lists.gentoo.org X-Mailer: Balsa 2.4.9 Message-id: <1309339925.13243.1@numa-i> X-Archives-Salt: X-Archives-Hash: fb8b9f03828ed31178c52b0cca6f65fa Hi, I'm looking for advice on the following hard nut. On one of my machines emerging dev-lang/R fails while on a very similar one it succeeds! On the 'bad one' I get lots of Warning in lazyLoadDBinsertVariable(vars[i], from, datafile, ascii, compress, : internal error 8 in R_compress3 and finally ** R ** data ** moving datasets to lazyload DB Warning: lzma decoding result 8 Error in if (!grepl("RD[AX]2\n", magic)) { : argument is of length zero ERROR: lazydata failed for package 'survival' On both machines I have xz-utils-5.0.3 installed and the 'bad machine' has even been reinstalled by an emerge --emtpytree some weeks, ago. The dev-lang/R problem happened before that and is still happening. I have re-emerged xz-utils but still no luck. It must have be related to some settings which are not changed by an emerge --emtpytree (As a work around, copying the binary package from that other machine and doing an emerge -k works just, but I'd like to know why) Many thanks for any hints, Helmut.