From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 6C14413826A for ; Thu, 26 May 2016 02:24:26 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 8CE0E21C012; Thu, 26 May 2016 02:24:25 +0000 (UTC) Received: from mout.kundenserver.de (mout.kundenserver.de [217.72.192.73]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id C672521C012 for ; Thu, 26 May 2016 02:24:24 +0000 (UTC) Received: from [192.168.6.147] ([91.125.237.217]) by mrelayeu.kundenserver.de (mreue102) with ESMTPSA (Nemesis) id 0LvSFP-1bVyy53EeJ-010gnr for ; Thu, 26 May 2016 04:24:22 +0200 Message-ID: <57465E55.7050701@iee.org> Date: Thu, 26 May 2016 03:24:21 +0100 From: "M. J. Everitt" User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:24.0) Gecko/20100101 Thunderbird/24.6.0 Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-science@lists.gentoo.org Reply-to: gentoo-science@lists.gentoo.org MIME-Version: 1.0 To: gentoo-science@lists.gentoo.org Subject: Re: [gentoo-science] Failed emerge for sci-visualization/mayavi-4.4.2 References: In-Reply-To: X-Enigmail-Version: 1.6 OpenPGP: id=93C22371 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Provags-ID: V03:K0:IzUTdE6of0Lu56DzgjcMCPa4SS3du5A59/BNnou3KXffxIutjZf XRkoT9Cgqnb5foTixOcb+TX+dKWCY4d7yHdmbt9EIvGyc57DDiVPkTxKoPcjKYXpTvBtyd/ 6Dt+0kSqqKr20+3UjLY4dRXqzVLBxCCrxrHxw42XDVOffvOOL7FIFzRsFqgrAAio9jTHtgi I7zCxyb5oV77znZB02/0Q== X-UI-Out-Filterresults: notjunk:1;V01:K0:qUysAzSi5Q0=:UyPMne9BUpDhUDNdNkwYZ0 SWd+gHycFq6uYlAwDUhPnoyxV+4vGgw7iGl4z6vLetKoTcD6HSt5AD36FnRLlP/yZ60OKh0Z0 KCnxFLxFIzG3RvqOQp26rpr8lDiM5UZEoGAE7YJeSV+rCjWAYIk03MlrjmzH3SMrR2fZLDWOs GDzZ/5brykbx84zfIOLm/zjQUjS6+uLaXXa/N0uMmd28E7Mzxts8rxPEkjLBJdVsBbtjoXJs5 yfQUnpfYVWZZq6qNGhnn8qt0M0XJnGioqs4d7f23k7i25sWSQMsVzqzdjA6SSPmZX+Kz/v3HF TUJT7d/ILbaVDjJkqZg2yCRZaKS+2RSNih5T76mv6JN9j961JNY6m+MSS6EqfH/mpB9COTahr J1iM5+8Cuhjux3/TrM2em/wfad0GuQKvfhdmSIDm3LTLgxuZuEEyM2Cpb4LGz5byNqhHpSHTc WUP+mLRXcWzVaMuhb9BQlPSbWB09QpIl5YHN5iJ53YaGN3FpLMszvp3JFMdkNBBKCZnEBH2/9 QIgtLKAesAL6VB/J3R/uXpxZnDQ8fuAj+aOpm3psMztabZRUbN40ClZCynSHpdhBc7wafyL/p uRRffRJkbqvP1pc8m9Q9xeZ/jSzz8fZt/6XRW68skbPFmiSV/ZOp9R1sNfTZHZ231+t0mfAsj lXTNdYDfUNbRy3N8XvsAO8zqiVqJkfYrFHiusxvv7U+7CcuOy0LkkWOT4Tscp1ezxBRUvVRG2 +EkmPVD4hUttQ3c+ X-Archives-Salt: 93aef894-725f-4d68-8a6b-98c6ac121531 X-Archives-Hash: 647e5d76a1d2c5a0ab646b3030f24521 On 20/05/16 14:34, marco restelli wrote: > Hi, > I have a problem emerging sci-visualization/mayavi-4.4.2: here is > the error message: > >>>> Compiling source in /var/tmp/portage/sci-visualization/mayavi-4.4.2/work/mayavi-4.4.2 ... > * python2_7: running distutils-r1_run_phase distutils-r1_python_compile > /usr/bin/python2.7 setup.py build > running build > ---------------------------------------------------------------------- > Building TVTK classes.../var/tmp/portage/sci-visualization/mayavi-4.4.2/temp/environment: > line 1434: 13669 Segmentation fault "${@}" > * ERROR: sci-visualization/mayavi-4.4.2::science failed (compile phase): > * (no error message) > * > * Call stack: > * ebuild.sh, line 133: Called src_compile > * environment, line 3657: Called distutils-r1_src_compile > * environment, line 949: Called _distutils-r1_run_foreach_impl > 'distutils-r1_python_compile' > * environment, line 370: Called python_foreach_impl > 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 3189: Called multibuild_foreach_variant > '_python_multibuild_wrapper' 'distutils-r1_run_phase' > 'distutils-r1_python_compile' > * environment, line 2291: Called _multibuild_run > '_python_multibuild_wrapper' 'distutils-r1_run_phase' > 'distutils-r1_python_compile' > * environment, line 2289: Called _python_multibuild_wrapper > 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 632: Called distutils-r1_run_phase > 'distutils-r1_python_compile' > * environment, line 940: Called distutils-r1_python_compile > * environment, line 812: Called esetup.py 'build' > * environment, line 1440: Called die > * The specific snippet of code: > * "${@}" || die "${die_args[@]}" || return ${?} > > > I could open a bug, but first I would like to understand whether the > problem is with the mayavi ebuild, or mayavi itself, or some > dependency. > > Thank you, > Marco > > > Here are some more details: > > # emerge --info '=sci-visualization/mayavi-4.4.2::science' > /bin/sh: warning: setlocale: LC_ALL: cannot change locale (en) > setlocale: unsupported locale setting > setlocale: unsupported locale setting > Portage 2.2.28 (python 3.4.3-final-0, > default/linux/amd64/13.0/desktop, gcc-4.9.3, glibc-2.22-r4, > 3.12.13-gentoo x86_64) > ================================================================= > System Settings > ================================================================= > System uname: Linux-3.12.13-gentoo-x86_64-Intel-R-_Core-TM-_i3-2120_CPU_@_3.30GHz-with-gentoo-2.2 > KiB Mem: 3926120 total, 739384 free > KiB Swap: 15999996 total, 15128780 free > Timestamp of repository gentoo: Fri, 20 May 2016 13:00:01 +0000 > sh bash 4.3_p42-r1 > ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 > app-shells/bash: 4.3_p42-r1::gentoo > dev-java/java-config: 2.2.0-r3::gentoo > dev-lang/perl: 5.20.2::gentoo > dev-lang/python: 2.7.10-r1::gentoo, 3.4.3-r1::gentoo > dev-util/cmake: 3.3.1-r1::gentoo > dev-util/pkgconfig: 0.28-r2::gentoo > sys-apps/baselayout: 2.2::gentoo > sys-apps/openrc: 0.19.1::gentoo > sys-apps/sandbox: 2.10-r1::gentoo > sys-devel/autoconf: 2.13::gentoo, 2.69::gentoo > sys-devel/automake: 1.11.6-r1::gentoo, 1.12.6::gentoo, > 1.14.1::gentoo, 1.15::gentoo > sys-devel/binutils: 2.25.1-r1::gentoo > sys-devel/gcc: 4.9.3::gentoo > sys-devel/gcc-config: 1.7.3::gentoo > sys-devel/libtool: 2.4.6::gentoo > sys-devel/make: 4.1-r1::gentoo > sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers) > sys-libs/glibc: 2.22-r4::gentoo > Repositories: > > gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > > science > location: /var/lib/layman/science > masters: gentoo > priority: 0 > > sage-on-gentoo > location: /var/lib/layman/sage-on-gentoo > masters: gentoo science > priority: 1 > > myebuild > location: /var/lib/myebuild > masters: gentoo > priority: 2 > > ACCEPT_KEYWORDS="amd64" > ACCEPT_LICENSE="* -@EULA" > CBUILD="x86_64-pc-linux-gnu" > CFLAGS="-march=native -O2 -pipe" > CHOST="x86_64-pc-linux-gnu" > CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc > /usr/share/config /usr/share/gnupg/qualified.txt" > CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d > /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release > /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo > /etc/texmf/language.dat.d /etc/texmf/language.def.d > /etc/texmf/updmap.d /etc/texmf/web2c" > CXXFLAGS="-march=native -O2 -pipe" > DISTDIR="/usr/portage/distfiles" > FCFLAGS="-O2 -pipe" > FEATURES="assume-digests binpkg-logs config-protect-if-modified > distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch > preserve-libs protect-owned sandbox sfperms splitdebug strict > unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv > usersandbox usersync xattr" > FFLAGS="-O2 -pipe" > GENTOO_MIRRORS="http://distfiles.gentoo.org" > LANG="en" > LC_ALL="en" > LDFLAGS="-Wl,-O1 -Wl,--as-needed" > MAKEOPTS="-j1" > PKGDIR="/usr/portage/packages" > PORTAGE_CONFIGROOT="/" > PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times > --omit-dir-times --compress --force --whole-file --delete --stats > --human-readable --timeout=180 --exclude=/distfiles --exclude=/local > --exclude=/packages --exclude=/.git" > PORTAGE_TMPDIR="/var/tmp" > USE="X a52 aac acl acpi afs alsa amd64 berkdb bluetooth branding bzip2 > cairo cdda cdr cli consolekit cracklib crypt cups cxx dbus djvu dri > dts dvd dvdr dvi emboss encode exif fam firefox flac fortran > fortran2003 gdbm gif glamor gpm gtk iconv icu ipv6 jpeg kerberos latex > lcms ldap libnotify lua luatex mad mate mmx mmxext mng modules mp3 mp4 > mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf > png policykit ppds qt3support qt4 readline sdl seccomp session spell > sse sse2 ssl startup-notification svg tcpd tetex tiff truetype udev > udisks unicode upower usb vim vim-syntax vorbis wxwidgets x264 xattr > xcb xml xv xvid zlib" ABI_X86="32 64" ALSA_CARDS="ali5451 als4000 > atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 > es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident > usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core > authz_core socache_shmcb unixd actions alias auth_basic authn_alias > authn_anon authn_dbm authn_default authn_file authz_dbm authz_default > authz_groupfile authz_host authz_owner authz_user autoindex cache cgi > cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter > file_cache filter headers include info log_config logio mem_cache mime > mime_magic negotiation rewrite setenvif speling status unique_id > userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan > sheets stage tables krita karbon braindump author" CAMERAS="ptp2" > COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" > CPU_FLAGS_X86="avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 > ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore > fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom > oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing > tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev" KERNEL="linux" > LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb > ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console > presenter-minimizer" LINGUAS="en en_US ar de eo es es_ES it af br da > cy fy he is nds nl oc yi el hr sr" OFFICE_IMPLEMENTATION="libreoffice" > PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" > PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" > USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock > lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee > tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" > Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, > PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, > PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON > Segmentation fault .. nice....