From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id B931213877A for ; Thu, 26 Jun 2014 21:09:12 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 7F8A6E0C64; Thu, 26 Jun 2014 21:09:01 +0000 (UTC) Received: from cantvb.canterbury.ac.nz (cantvb.canterbury.ac.nz [132.181.2.28]) (using TLSv1 with cipher DHE-RSA-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id ACE74E0C63 for ; Thu, 26 Jun 2014 21:08:50 +0000 (UTC) Received: from CONVERSION-DAEMON.it.canterbury.ac.nz by it.canterbury.ac.nz (PMDF V6.6-x1 #32072) id <01P9I3XNVV9SC4CBU1@it.canterbury.ac.nz> for gentoo-science@lists.gentoo.org; Fri, 27 Jun 2014 09:08:38 +1300 (NEW ZEALAND DAYLIGHT TIME) Received: from qcd-nzi3.localnet (QCD-nzi3.canterbury.ac.nz [132.181.31.206]) by it.canterbury.ac.nz (PMDF V6.6-x1 #32072) with ESMTPS id <01P9I3XNIWGMC42N3U@it.canterbury.ac.nz>; Fri, 27 Jun 2014 09:08:38 +1300 (NEW ZEALAND DAYLIGHT TIME) Date: Fri, 27 Jun 2014 09:08:36 +1200 From: =?ISO-8859-1?Q?Fran=E7ois?= Bissey Subject: Re: [gentoo-science] Trouble building scipy-0.14.0 against acml In-reply-to: <53AC84FC.6090207@arcor.de> To: gentoo-science@lists.gentoo.org Cc: Bastian =?ISO-8859-1?Q?L=F6ffler?= Message-id: <51997702.EADO2SZfiD@qcd-nzi3> Organization: BlueFern Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-science@lists.gentoo.org Reply-to: gentoo-science@lists.gentoo.org MIME-version: 1.0 Content-type: text/plain; charset=iso-8859-1 Content-transfer-encoding: quoted-printable User-Agent: KMail/4.12.5 (Linux/3.12.13-gentoo; KDE/4.12.5; x86_64; ; ) References: <53959961.1060000@bastian-loeffler.de> <2226924.ppVAimK6bd@qcd-nzi3> <53AC84FC.6090207@arcor.de> X-Archives-Salt: fa5d2b17-2fd7-4473-8669-2d79921e318f X-Archives-Hash: f05af44e1156ffea8fe9f80c67f864b3 Did you eselect a cblas as I suggested in: http://article.gmane.org/gmane.linux.gentoo.science/2159 Francois On Thu, 26 Jun 2014 22:39:24 Bastian L=F6ffler wrote: > still the same issue here. Some news? >=20 > Am 16.06.2014 03:27, schrieb Fran=E7ois Bissey: > > And > > pkg-config --libs-only-L cblas blas > > since that's what is actually parsed by the ebuild. Have you > > any cblas eselected? If yes which one. > >=20 > > Francois > >=20 > > On Mon, 16 Jun 2014 13:19:57 Fran=E7ois Bissey wrote: > >> Out of curiosity and to jog my brain can you send the equivalent f= or > >> lapack? > >>=20 > >> Something is definitely going wrong when the site.cfg is generated= . > >>=20 > >> Francois > >>=20 > >> On Sun, 15 Jun 2014 23:40:13 Bastian L=F6ffler wrote: > >>> pkg-config --libs-only-L blas > >>> -L//opt/acml5.3.1/gfortran64/lib > >>>=20 > >>> cat /usr/lib64/pkgconfig/blas.pc > >>> prefix=3D//opt/acml5.3.1/gfortran64 > >>> libdir=3D${prefix}/lib > >>> includedir=3D${prefix}/include > >>> Name: acml-gfortran64 > >>> Description: AMD Core Math Library for amd64 CPUs > >>> Version: 5.3.1 > >>> URL: > >>> http://developer.amd.com/tools/cpu-development/amd-core-math-libr= ary-acm > >>> l/ > >>> Libs: -L${libdir} -lacml > >>> Libs.private: -lm -lrt > >>> Cflags: -I${includedir} > >>>=20 > >>> ls -la /usr/lib64/pkgconfig/blas.pc > >>> lrwxrwxrwx 1 root root 73 14. Jan 00:04 /usr/lib64/pkgconfig/blas= .pc -> > >>> ../../../etc/env.d/alternatives/blas/_current/usr/lib64/pkgconfig= /blas.p > >>> c > >>>=20 > >>> Am 15.06.2014 23:32, schrieb Fran=E7ois Bissey: > >>>> OK so it looks sane, let's do some more sanity check as in the e= mail > >>>> I linked: > >>>> pkg-config --libs-only-L blas > >>>> cat /usr/lib64/pkgconfig/blas.pc > >>>> ls -la /usr/lib64/pkgconfig/blas.pc > >>>>=20 > >>>> On Sun, 15 Jun 2014 23:30:22 Bastian L=F6ffler wrote: > >>>>> Well of course i checked that: > >>>>>=20 > >>>>> eselect blas list > >>>>>=20 > >>>>> Available providers for blas: > >>>>> [1] acml-gfortran64 * > >>>>> [2] acml-gfortran64-openmp > >>>>> [3] eigen > >>>>> [4] reference > >>>>>=20 > >>>>> SO my blas is acml-gfortran64.