From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1SaYzt-0001XV-Fg for garchives@archives.gentoo.org; Fri, 01 Jun 2012 21:03:01 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 6985AE04E7 for ; Fri, 1 Jun 2012 21:03:00 +0000 (UTC) Received: from mxi2.callplus.net.nz (mx194.callplus.net.nz [202.180.66.194]) by pigeon.gentoo.org (Postfix) with ESMTP id B4EF7E055E for ; Fri, 1 Jun 2012 19:27:29 +0000 (UTC) X-IronPort-Anti-Spam-Filtered: true X-IronPort-Anti-Spam-Result: AscVADwXyU/KtHWD/2dsb2JhbABFh3uodIInBIElgQiCGAEBBTocGBsLGAkVEA8BKR4GAYgcuAqLD1eFHgOlDoJ1 X-IronPort-AV: E=Sophos;i="4.75,699,1330858800"; d="scan'208";a="269424424" Received: from 202-180-117-131.callplus.net.nz (HELO vrooom-vrooom.localnet) ([202.180.117.131]) by ismtp2.tranzpeer.net with ESMTP/TLS/DHE-RSA-AES256-SHA; 02 Jun 2012 07:27:08 +1200 From: Francois Bissey To: gentoo-science@lists.gentoo.org, Thomas Kahle Subject: Re: [gentoo-science] World updates with sage installed - portage bug? Date: Sat, 02 Jun 2012 07:26:54 +1200 Message-ID: <2406647.QNWjxfJBFB@vrooom-vrooom> User-Agent: KMail/4.8.3 (Linux/3.0.0-sabayon; KDE/4.8.3; i686; ; ) In-Reply-To: <20120601095224.GI22017@schlaumatte.ethz.ch> References: <20120601095224.GI22017@schlaumatte.ethz.ch> Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-science@lists.gentoo.org Reply-to: gentoo-science@lists.gentoo.org MIME-Version: 1.0 Content-Transfer-Encoding: 7Bit Content-Type: text/plain; charset="us-ascii" X-Archives-Salt: c1ae5a42-a052-4b5c-bcfa-e8e3c364dbea X-Archives-Hash: cde5cb131fc367877bce4afbcd45d0c7 On Fri, 01 Jun 2012 11:52:24 Thomas Kahle wrote: > Hi, > > now that I have sage-on-gentoo installed I can't do world updates with > the -D option anymore. Looks like a portage quirk to me. > > There seem to be at least two problems: > > I have sci-mathematics/singular in my world file and the -D option > forces portage to think that I insist on the latest version. Therefore > it collides with sage-on-gentoo insisting on 3.1.3: > > sci-mathematics/singular:0 > > (sci-mathematics/singular-3.1.3.3::gentoo, installed) pulled in by > ~sci-mathematics/singular-3.1.3.3 required by > (sci-mathematics/sage-5.0-r1::sage-on-gentoo, installed) > > (sci-mathematics/singular-3.1.4-r1::gentoo, ebuild scheduled for merge) > pulled in by (no parents that aren't satisfied by other packages in this > slot) > > > There also is an eselect issue. I don't know why, but eselect-blas and > eselect-lapack are pulled in, although blocked by the new gsl: > > [blocks B ] app-admin/eselect-blas ("app-admin/eselect-blas" is > blocking sci-libs/gsl-1.15-r2, sci-libs/cblas-reference-20110218) [blocks B > ] app-admin/eselect-lapack ("app-admin/eselect-lapack" is blocking > sci-libs/gsl-1.15-r2, sci-libs/cblas-reference-20110218) > > However, without the -D option I just get a warning: > > WARNING: One or more updates have been skipped due to a dependency conflict: > > sci-mathematics/singular:0 > > (sci-mathematics/singular-3.1.4-r1::gentoo, ebuild scheduled for merge) > conflicts with ~sci-mathematics/singular-3.1.3.3 required by > (sci-mathematics/sage-5.0-r1::sage-on-gentoo, installed) > > > Any ideas? Shall I carry this to the portage mailing list? > Cheers, We need to know what pulls these eselect modules. What is the portage output when you add the "t" option. It should show what wants what. Copying you directly in case it doesn't make it to the list. Francois