[gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[forenhampel]

Hi there,

I'm new to the mailing list as well to gentoo overlays. I recently tried to 
install sage from the sage-on-gentoo overlay. Unfortunately I wasn't
able to do so as fetching the package sci-libs/mpfi-1.4, which was
pulled in as a dependency, failed. There seems to be an certificate
issue. Please see the Log file at http://pastebin.com/ViYdMu9k .
I'm not really familiar with certficates, so does this error occur because
some server is temporarily down or is there more to this?

Best regards

Ralf

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[Christopher Schwan]

Hi Ralf,

On Saturday 20 November 2010 14:36:49 forenhampel wrote:
> Hi there,
> 
> I'm new to the mailing list as well to gentoo overlays. I recently tried to
> install sage from the sage-on-gentoo overlay. Unfortunately I wasn't
> able to do so as fetching the package sci-libs/mpfi-1.4, which was
> pulled in as a dependency, failed. There seems to be an certificate
> issue. Please see the Log file at http://pastebin.com/ViYdMu9k .
> I'm not really familiar with certficates, so does this error occur because
> some server is temporarily down or is there more to this?

I am able to reproduce the failure - the server issues a self-signed 
certificate which isnt accepted by portage. Quick solution: download mpfi 
yourself - go into your distfiles directory (usually /usr/portage/distfiles) and 
type

wget --no-check-certificate  \
http://gforge.inria.fr/frs/download.php/22256/mpfi-1.4.tar.gz

which will manually download the tarball. You will then be able to resume the 
merge. I will try to fix the problem but first have to find out the right 
solution.

Does anyone on the list know how to deal with self signed certificates ?

> 
> Best regards
> 
> Ralf

Cheers,

Christopher

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[François Bissey]

> Hi Ralf,
> 
> On Saturday 20 November 2010 14:36:49 forenhampel wrote:
> > Hi there,
> > 
> > I'm new to the mailing list as well to gentoo overlays. I recently tried
> > to install sage from the sage-on-gentoo overlay. Unfortunately I wasn't
> > able to do so as fetching the package sci-libs/mpfi-1.4, which was
> > pulled in as a dependency, failed. There seems to be an certificate
> > issue. Please see the Log file at http://pastebin.com/ViYdMu9k . I'm not
> > really familiar with certficates, so does this error occur because some
> > server is temporarily down or is there more to this?
> 
> I am able to reproduce the failure - the server issues a self-signed
> certificate which isnt accepted by portage. Quick solution: download mpfi
> yourself - go into your distfiles directory (usually
> /usr/portage/distfiles) and type
> 
> wget --no-check-certificate  \
> http://gforge.inria.fr/frs/download.php/22256/mpfi-1.4.tar.gz
> 
> which will manually download the tarball. You will then be able to resume
> the merge. I will try to fix the problem but first have to find out the
> right solution.
> 
> Does anyone on the list know how to deal with self signed certificates ?
> 
I cannot reproduce the issue. ebuild fetch and emerge both work like a charm
and download the file. 
Two possibilities:
1) temporary issues, you just fetch at the wrong time.
2) version of portage and list of FEAURES please

Nevertheless we should change the SRC_URI to reflect the move to https.
I will see to revbump to 1.5 as well.

Francois

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[Christopher Schwan]

Hi,

On Saturday 20 November 2010 20:16:04 François Bissey wrote:
> [...]
> 
> I cannot reproduce the issue. ebuild fetch and emerge both work like a
> charm and download the file.
> Two possibilities:
> 1) temporary issues, you just fetch at the wrong time.
> 2) version of portage and list of FEAURES please

Its indeed the portage version:

- Portage 2.2.01.17168-prefix -> does not work
- Portage 2.1.8.3 -> works

> 
> Nevertheless we should change the SRC_URI to reflect the move to https.
> I will see to revbump to 1.5 as well.
> 
> Francois

Christopher

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[Christopher Schwan]

Hi,

On Sunday 21 November 2010 09:45:46 Christopher Schwan wrote:
> Hi,
> 
> On Saturday 20 November 2010 20:16:04 François Bissey wrote:
> > [...]
> > 
> > I cannot reproduce the issue. ebuild fetch and emerge both work like a
> > charm and download the file.
> > Two possibilities:
> > 1) temporary issues, you just fetch at the wrong time.
> > 2) version of portage and list of FEAURES please
> 
> Its indeed the portage version:
> 
> - Portage 2.2.01.17168-prefix -> does not work
> - Portage 2.1.8.3 -> works

I experienced the following behavior: In a prefixed shell wget-1.12-r1 fails to 
download from gforge.inria.fr (complaining the server's certificate is self-
signed), in a default shell it works both with wget-1.12-r{1,2}.

Ralf: Please send us your output of

    emerge --info

> 
> > Nevertheless we should change the SRC_URI to reflect the move to https.
> > I will see to revbump to 1.5 as well.
> > 
> > Francois
> 
> Christopher

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[forenhampel]

[-- Attachment #1: Type: Text/Plain, Size: 347 bytes --]

Hi there,

first of all, thank you for the hint. After downloading the tarball manually,
I could finish the install. For the sake of completeness, the package
sci-mathematics/ecm-6.3-r1 gave me the same error, wich could be resolved
in the same way. Please find my emerge --info in the attachment.
Portage version is 2.1.8.3.

Best regards

Ralf


[-- Attachment #2: info.txt --]
[-- Type: text/plain, Size: 5272 bytes --]

Portage 2.1.8.3 (default/linux/x86/10.0/desktop/kde, gcc-4.4.4, glibc-2.11.2-r3, 2.6.35-gentoo-r4 i686)
=================================================================
System uname: Linux-2.6.35-gentoo-r4-i686-AMD_Athlon-tm-_64_Processor_3500+-with-gentoo-1.12.14
Timestamp of tree: Sun, 21 Nov 2010 01:45:02 +0000
app-shells/bash:     4.1_p7
dev-java/java-config: 2.1.11-r1
dev-lang/python:     2.6.5-r3, 3.1.2-r4
dev-util/cmake:      2.8.1-r2
sys-apps/baselayout: 1.12.14-r1
sys-apps/sandbox:    2.3-r1
sys-devel/autoconf:  2.13, 2.65-r1
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.4.4-r2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=k8 -pipe -fomit-frame-pointer"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=k8 -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests distlocks fixpackages news parallel-fetch protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://mirror.netcologne.de/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://ftp.join.uni-muenster.de/pub/linux/distributions/gentoo http://gentoo.mneisen.org/ http://de-mirror.org/distro/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ ftp://de-mirror.org/distro/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ ftp://linux.rz.ruhr-uni-bochum.de/gentoo-mirror/ ftp://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ "
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="de en"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/sunrise /var/lib/layman/sage-on-gentoo /usr/local/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="X a52 aac aalib acl acpi addressbook alsa berkdb bluetooth branding bzip2 cairo cdr cli consolekit contactnotes cracklib crypt cups cxx dbus djvu dri dts dvd dvdr ebook embedded emboss encode exif extras fam ffmpeg firefox flac fortran gdbm gif gimp gnutls gphoto2 gpm gs hal history iconv ipv6 jabber java jpeg kde kontact latex lcms ldap lensfun libcaca libnotify mad mikmod mmx mng modules mp3 mp4 mpeg msn mudflap ncurses nls nptl nptlonly nsplugin nvidia ogg opengl openmp oscar otr pam pango pcre pdf perl png ppds pppd ps python qt3support qt4 quicktime raw readline sdl semantic-desktop session spell sse ssl startup-notification svg sysfs t1lib tcpd theora threads thumbnail tiff truetype unicode usb vorbis x264 x86 xcb xml xorg xulrunner xv xvid xvmc yahoo zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de en" PHP_TARGETS="php5-2" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[Christopher Schwan]

Hi,

On Sunday 21 November 2010 13:19:28 forenhampel wrote:
> Hi there,
> 
> first of all, thank you for the hint. After downloading the tarball
> manually, I could finish the install. For the sake of completeness, the
> package sci-mathematics/ecm-6.3-r1 gave me the same error, wich could be
> resolved in the same way. Please find my emerge --info in the attachment.
> Portage version is 2.1.8.3.

I am very sure its a problem with wget. Please send me the version you have 
installed and its enabled USE-flags.

> 
> Best regards
> 
> Ralf

Cheers,

Christopher

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[Christopher Schwan]

Hi,

On Monday 22 November 2010 10:32:26 Christopher Schwan wrote:
> Hi,
> 
> On Sunday 21 November 2010 13:19:28 forenhampel wrote:
> > Hi there,
> > 
> > first of all, thank you for the hint. After downloading the tarball
> > manually, I could finish the install. For the sake of completeness, the
> > package sci-mathematics/ecm-6.3-r1 gave me the same error, wich could be
> > resolved in the same way. Please find my emerge --info in the attachment.
> > Portage version is 2.1.8.3.
> 
> I am very sure its a problem with wget. Please send me the version you have
> installed and its enabled USE-flags.

Please try the following instead: recompile openssl and after that wget. This 
solved the problem on my prefix installation. If it does not work send my the 
version and USE-flag info of openssl/wget.

> 
> > Best regards
> > 
> > Ralf
> 
> Cheers,
> 
> Christopher

Re: [gentoo-science] Fetch failed for sci-libs/mpfi-1.4

[forenhampel]

Hi there,

> 
> Please try the following instead: recompile openssl and after that wget.
> This solved the problem on my prefix installation. If it does not work
> send my the version and USE-flag info of openssl/wget.
> 

recompiling openssl and wget solved the issue for me too.
Thank you  very much for your efforts.

Cheers,

Ralf