[gentoo-science] undefined symbol: dgetri

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* [gentoo-science] undefined symbol: dgetri_  --  again.
@ 2010-10-12  8:07 v_2e
  2010-10-12  8:11 ` François Bissey
  0 siblings, 1 reply; 8+ messages in thread
From: v_2e @ 2010-10-12  8:07 UTC (permalink / raw
  To: gentoo-science

  Hello!
  I have not been using Sage for some time on my home PC and yesterday
I needed to do some calculations, but unfortunately, I found Sage in
nonworking state.
  It gives me the following error message right after start:

############## Quote #############
ImportError                               Traceback (most recent call
last)

/usr/lib64/python2.6/site-packages/IPython/ipmaker.pyc in force_import
(modname, force_reload) 61         reload(sys.modules[modname])
     62     else:
---> 63         __import__(modname)
     64         
     65 

/usr/bin/ipy_profile_sage.py in <module>()
      5     preparser(True)
      6     
----> 7     import sage.all_cmdline
      8     sage.all_cmdline._init_cmdline(globals())
      9     

/usr/lib64/python2.6/site-packages/sage/all_cmdline.py in <module>()
     12 try:
     13 
---> 14     from sage.all import *
     15     from sage.calculus.predefined import x
     16     preparser(on=True)

/usr/lib64/python2.6/site-packages/sage/all.py in <module>()
     71 
     72 from sage.rings.all      import *
---> 73 from sage.matrix.all     import *
     74 
     75 # This must come before Calculus -- it initializes the Pynac
library.

/usr/lib64/python2.6/site-packages/sage/matrix/all.py in <module>()
----> 1 
      2 
      3 from matrix_space import MatrixSpace, is_MatrixSpace
      4 from constructor import matrix, Matrix, random_matrix,
diagonal_matrix, identity_matrix, block_matrix, block_diagonal_matrix,
jordan_block, zero_matrix 5 from matrix import is_Matrix 6 from
berlekamp_massey import berlekamp_massey 7 

/usr/lib64/python2.6/site-packages/sage/matrix/matrix_space.pyc in
<module>() 35 import matrix_generic_sparse
     36 
---> 37 import matrix_modn_dense
     38 import matrix_modn_sparse
     39 

/usr/bin/matrix_integer_dense.pxd in init sage.matrix.matrix_modn_dense
(sage/matrix/matrix_modn_dense.c:14829)() 10 
     11 
---> 12 
     13 
     14 

/usr/bin/linbox.pxd in init sage.matrix.matrix_integer_dense
(sage/matrix/matrix_integer_dense.c:39016)() 5 
      6 
----> 7 
      8 
      9 

ImportError: /usr/lib/liblinboxsage.so.0: undefined symbol: dgetri_
Error importing ipy_profile_sage - perhaps you should run %upgrade?
WARNING: Loading of ipy_profile_sage failed.
############### End ##############

I remember this error has already happened. I had to install
'linbox-1.1.6-r1' then to get Sage working. But now there is no such
linbox version in the 'sage-on-gentoo' overlay.

What can I do this time to get it working again?

  Thanks,
  Vladimir
----- 
 <v_2e@ukr.net>



^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:07 [gentoo-science] undefined symbol: dgetri_ -- again v_2e
@ 2010-10-12  8:11 ` François Bissey
  2010-10-12  8:20   ` v_2e
  0 siblings, 1 reply; 8+ messages in thread
From: François Bissey @ 2010-10-12  8:11 UTC (permalink / raw
  To: gentoo-science

Hi Vladimir,

In theory we have nailed the problem in the very latest version of
linbox-1.16-r3. 
Can you tell us more about your BLAS/ATLAS configuration.
Can you give us the outputs of:
eselect cblas list
eselect blas list
eselect lapack list

Thank you,
Francois

^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:11 ` François Bissey
@ 2010-10-12  8:20   ` v_2e
  2010-10-12  8:28     ` François Bissey
  0 siblings, 1 reply; 8+ messages in thread
From: v_2e @ 2010-10-12  8:20 UTC (permalink / raw
  To: gentoo-science

On Tue, 12 Oct 2010 21:11:08 +1300
François Bissey <f.r.bissey@massey.ac.nz> wrote:

> Hi Vladimir,
> 
> In theory we have nailed the problem in the very latest version of
> linbox-1.16-r3. 
> Can you tell us more about your BLAS/ATLAS configuration.
> Can you give us the outputs of:
> eselect cblas list
> eselect blas list
> eselect lapack list
> 
> Thank you,
> Francois
> 

Installed CBLAS for library directory lib64
  [1]   atlas
  [2]   gsl *

Installed BLAS for library directory lib64
  [1]   atlas *
  [2]   reference 

Installed LAPACK for library directory lib64
  [1]   atlas *
  [2]   reference

  Regards,
  Vladimir
----- 
 <v_2e@ukr.net>



^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:20   ` v_2e
@ 2010-10-12  8:28     ` François Bissey
  2010-10-12  8:40       ` v_2e
  0 siblings, 1 reply; 8+ messages in thread
From: François Bissey @ 2010-10-12  8:28 UTC (permalink / raw
  To: gentoo-science

> On Tue, 12 Oct 2010 21:11:08 +1300
> 
> François Bissey <f.r.bissey@massey.ac.nz> wrote:
> > Hi Vladimir,
> > 
> > In theory we have nailed the problem in the very latest version of
> > linbox-1.16-r3.
> > Can you tell us more about your BLAS/ATLAS configuration.
> > Can you give us the outputs of:
> > eselect cblas list
> > eselect blas list
> > eselect lapack list
> > 
> > Thank you,
> > Francois
> 
> Installed CBLAS for library directory lib64
>   [1]   atlas
>   [2]   gsl *
> 
> Installed BLAS for library directory lib64
>   [1]   atlas *
>   [2]   reference
> 
> Installed LAPACK for library directory lib64
>   [1]   atlas *
>   [2]   reference
> 
Yes you have the typical configuration that was leading to trouble and
that we have dealt with. If you are using the latest linbox ebuild from the
overlay and it still doesn't work, send us the output of 
ldd /usr/lib64/liblinboxsage.so
And also how recently you have synced the main tree, has the last fix
required an eclass bug to be fixed.

Francois



^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:28     ` François Bissey
@ 2010-10-12  8:40       ` v_2e
  2010-10-12  8:52         ` François Bissey
  0 siblings, 1 reply; 8+ messages in thread
From: v_2e @ 2010-10-12  8:40 UTC (permalink / raw
  To: gentoo-science

On Tue, 12 Oct 2010 21:28:55 +1300
François Bissey <f.r.bissey@massey.ac.nz> wrote:

> Yes you have the typical configuration that was leading to trouble and
> that we have dealt with. If you are using the latest linbox ebuild from the
> overlay and it still doesn't work, send us the output of 
> ldd /usr/lib64/liblinboxsage.so
  I'm using the
'/var/lib/layman/sage-on-gentoo/sci-libs/linbox/linbox-1.1.6-r3.ebuild'
from yesterday-synced layman 'sage-on-gentoo' overlay.

ldd /usr/lib64/liblinboxsage.so gives the following:

	linux-vdso.so.1 =>  (0x00007fffd2f75000)
	libntl-5.5.2.so => /usr/lib/libntl-5.5.2.so (0x00007ff6a00a6000)
	liblinbox.so.0 => /usr/lib/liblinbox.so.0 (0x00007ff69fe95000)
	libblas.so.0 => /usr/lib/libblas.so.0 (0x00007ff69fc72000)
	libgmp.so.10 => /usr/lib/libgmp.so.10 (0x00007ff69fa03000)
	libgivaro.so.0 => /usr/lib/libgivaro.so.0 (0x00007ff69f7b2000)
	libstdc++.so.6 => /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/libstdc
++.so.6 (0x00007ff69f49e000) libm.so.6 => /lib/libm.so.6
(0x00007ff69f21d000) libc.so.6 => /lib/libc.so.6 (0x00007ff69eeb7000)
	libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00007ff69ec9f000)
	libgmp.so.3 => /usr/lib/libgmp.so.3 (0x00007ff69ea48000)
	libgf2x.so.1 => /usr/lib/libgf2x.so.1 (0x00007ff69e83a000)
	libgfortran.so.3
=> /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/libgfortran.so.3
(0x00007ff69e54b000) libatlas.so.0 => /usr/lib/libatlas.so.0
(0x00007ff69df07000) /lib64/ld-linux-x86-64.so.2 (0x00007ff6a0889000)

> And also how recently you have synced the main tree, has the last fix
> required an eclass bug to be fixed.
  I have synced the main tree yesterday, just before updating Sage and
the packages it depends on.
  I'm not sure I understand you right about 'has the last fix required
an eclass bug to be fixed'.
> 
> Francois

Vladimir
----- 
 <v_2e@ukr.net>



^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:40       ` v_2e
@ 2010-10-12  8:52         ` François Bissey
  2010-10-12  9:32           ` v_2e
  0 siblings, 1 reply; 8+ messages in thread
From: François Bissey @ 2010-10-12  8:52 UTC (permalink / raw
  To: gentoo-science

> On Tue, 12 Oct 2010 21:28:55 +1300
> 
> François Bissey <f.r.bissey@massey.ac.nz> wrote:
> > Yes you have the typical configuration that was leading to trouble and
> > that we have dealt with. If you are using the latest linbox ebuild from
> > the overlay and it still doesn't work, send us the output of
> > ldd /usr/lib64/liblinboxsage.so
> 
>   I'm using the
> '/var/lib/layman/sage-on-gentoo/sci-libs/linbox/linbox-1.1.6-r3.ebuild'
> from yesterday-synced layman 'sage-on-gentoo' overlay.
> 
> ldd /usr/lib64/liblinboxsage.so gives the following:
> 
> 	linux-vdso.so.1 =>  (0x00007fffd2f75000)
> 	libntl-5.5.2.so => /usr/lib/libntl-5.5.2.so (0x00007ff6a00a6000)
> 	liblinbox.so.0 => /usr/lib/liblinbox.so.0 (0x00007ff69fe95000)
> 	libblas.so.0 => /usr/lib/libblas.so.0 (0x00007ff69fc72000)
> 	libgmp.so.10 => /usr/lib/libgmp.so.10 (0x00007ff69fa03000)
> 	libgivaro.so.0 => /usr/lib/libgivaro.so.0 (0x00007ff69f7b2000)
> 	libstdc++.so.6 => /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/libstdc
> ++.so.6 (0x00007ff69f49e000) libm.so.6 => /lib/libm.so.6
> (0x00007ff69f21d000) libc.so.6 => /lib/libc.so.6 (0x00007ff69eeb7000)
> 	libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00007ff69ec9f000)
> 	libgmp.so.3 => /usr/lib/libgmp.so.3 (0x00007ff69ea48000)
> 	libgf2x.so.1 => /usr/lib/libgf2x.so.1 (0x00007ff69e83a000)
> 	libgfortran.so.3
> => /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/libgfortran.so.3
> (0x00007ff69e54b000) libatlas.so.0 => /usr/lib/libatlas.so.0
> (0x00007ff69df07000) /lib64/ld-linux-x86-64.so.2 (0x00007ff6a0889000)
> 
> > And also how recently you have synced the main tree, has the last fix
> > required an eclass bug to be fixed.
> 
>   I have synced the main tree yesterday, just before updating Sage and
> the packages it depends on.
>   I'm not sure I understand you right about 'has the last fix required
> an eclass bug to be fixed'.
> 
I meant an "as an eclass bug had to be fixed", the fix developed by me 
Martin von Gagern wouldn't take because the autotool eclass missed some 
double quotes see bug #339227.

Basically as far as we understand that's a problem when using gsl for your
cblas. There are two workarounds while we work out why it doesn't work for 
you:
1) switch to atlas cblas
or
2) compile gsl with the "static-libs" useflag.
Then recompile linbox.

Before you do that, it would be helpful if you sent us a build log of 
lnbox-1.1.6-r3 and if you know how the configuration log of linbox.

Cheers,
Francois



^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  8:52         ` François Bissey
@ 2010-10-12  9:32           ` v_2e
  2010-10-12 10:02             ` François Bissey
  0 siblings, 1 reply; 8+ messages in thread
From: v_2e @ 2010-10-12  9:32 UTC (permalink / raw
  To: gentoo-science

[-- Attachment #1: Type: text/plain, Size: 852 bytes --]

On Tue, 12 Oct 2010 21:52:48 +1300
François Bissey <f.r.bissey@massey.ac.nz> wrote:

> Basically as far as we understand that's a problem when using gsl for your
> cblas. There are two workarounds while we work out why it doesn't work for 
> you:
> 1) switch to atlas cblas
> or
> 2) compile gsl with the "static-libs" useflag.
> Then recompile linbox.
> 
> Before you do that, it would be helpful if you sent us a build log of 
> lnbox-1.1.6-r3 and if you know how the configuration log of linbox.
> 
> Cheers,
> Francois
> 
  I have just re-emerged linbox-1.1.6-r3 without  changing any cblas
configuration (just to produce a build.log) and Sage now works!
So I am surprised and I can understand nothing about all this
situation. 
  I have attached the build.log just in case.

  Thanks,
  Vladimir
----- 
 <v_2e@ukr.net>

[-- Attachment #2: linbox-1.1.6-r3.build.log --]
[-- Type: text/x-log, Size: 71631 bytes --]

 * Package:    sci-libs/linbox-1.1.6-r3
 * Repository: sage-on-gentoo
 * Maintainer: sage
 * USE:  amd64 elibc_glibc kernel_linux multilib ntl sage userland_GNU
>>> Unpacking source...
>>> Unpacking linbox-1.1.6.tar.gz to /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work
>>> Source unpacked in /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work
>>> Preparing source in /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 ...
 * Applying linbox-1.1.6-fix-config.patch ...                            [ ok ]
 * Applying linbox-1.1.6-nolapack.patch ...                              [ ok ]
 * Applying linbox-1.1.6-fix-double-installation.patch ...               [ ok ]
 * Applying linbox-1.1.6-fix-undefined-symbols.patch ...                 [ ok ]
 * Applying linbox-1.1.6-disable-commentator.patch ...                   [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6' ...
 * Running aclocal -I macros ...                                         [ ok ]
 * Running libtoolize --copy --force --install --automake ...            [ ok ]
 * Running aclocal -I macros ...                                         [ ok ]
 * Running autoconf ...                                                  [ ok ]
 * Running autoheader ...                                                [ !! ]
 * Running automake --add-missing --copy ...                             [ ok ]
 * Running elibtoolize in: linbox-1.1.6/
 *   Applying portage-2.2.patch ...
 *   Applying sed-1.5.6.patch ...
 *   Applying as-needed-2.2.6.patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6"
 * econf: updating linbox-1.1.6/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating linbox-1.1.6/config.guess with /usr/share/gnuconfig/config.guess
/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --enable-shared --disable-static --enable-optimization --with-blas=-lcblas   --with-givaro=/usr --with-ntl --enable-sage
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of __int64... 0
checking whether byte ordering is bigendian... no
Default path = /usr /usr/local
checking whether to compile the drivers... no
checking for GMP >= 3.1.1... found
checking whether GMP is 4.0 or greater... yes
checking whether GMP was compiled with --enable-cxx... yes
checking for NTL >= 5.0... found
checking for GIVARO >= 3.2.12... found
checking whether to compile the sage interface... yes
checking for C interface to BLAS... found
checking whether to use run time optimization... yes
checking best threshold for Strassen-Winograd matrix multiplication... 
fgemm 300x300: 0.186972 s, 288.813 Mffops
1Wino 300x300: 0.069989 s, 771.55 Mffops

fgemm 300x300: 0.188972 s, 285.757 Mffops
1Wino 300x300: 0.069989 s, 771.55 Mffops

fgemm 44x44: 0 s, inf Mffops
1Wino 44x44: 0 s, inf Mffops

fgemm 172x172: 0.019997 s, 508.921 Mffops
1Wino 172x172: 0.011998 s, 848.216 Mffops

fgemm 172x172: 0.019997 s, 508.921 Mffops
1Wino 172x172: 0.011998 s, 848.216 Mffops
done
checking whether to build documentation... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating linbox-config
config.status: creating examples/Makefile
config.status: creating examples/fields/Makefile
config.status: creating examples/Readme-make
config.status: creating doc/Makefile
config.status: creating linbox/Makefile
config.status: creating linbox/algorithms/Makefile
config.status: creating linbox/fflas/Makefile
config.status: creating linbox/ffpack/Makefile
config.status: creating linbox/blackbox/Makefile
config.status: creating linbox/element/Makefile
config.status: creating linbox/field/Makefile
config.status: creating linbox/matrix/Makefile
config.status: creating linbox/randiter/Makefile
config.status: creating linbox/ring/Makefile
config.status: creating linbox/solutions/Makefile
config.status: creating linbox/switch/Makefile
config.status: creating linbox/util/Makefile
config.status: creating linbox/util/formats/Makefile
config.status: creating linbox/vector/Makefile
config.status: creating tests/Makefile
config.status: creating tests/data/Makefile
config.status: creating interfaces/Makefile
config.status: creating interfaces/driver/Makefile
config.status: creating interfaces/maple/Makefile
config.status: creating interfaces/kaapi/Makefile
config.status: creating interfaces/sage/Makefile
config.status: creating macros/Makefile
config.status: creating config.h
config.status: executing linbox/linbox-config.h commands
config.status: creating linbox/linbox-config.h - prefix __LINBOX for config.h defines
config.status: executing depfiles commands
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 ...
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6"
make -j3 
make  all-recursive
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
Making all in linbox
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
Making all in util
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
Making all in formats
make[4]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[4]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox    -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o timer.lo timer.C
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox    -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o error.lo error.C
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox    -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o commentator.lo commentator.C
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c timer.C  -fPIC -DPIC -o .libs/timer.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c error.C  -fPIC -DPIC -o .libs/error.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c commentator.C  -fPIC -DPIC -o .libs/commentator.o
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox    -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o debug.lo debug.C
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../linbox -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c debug.C  -fPIC -DPIC -o .libs/debug.o
/bin/sh ../../libtool --tag=CXX   --mode=link x86_64-pc-linux-gnu-g++  -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS  -Wl,-O1 -Wl,--as-needed -o libutil.la  timer.lo error.lo commentator.lo debug.lo  -lcblas   -lgmpxx -lgmp -lgivaro
libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libutil.a .libs/timer.o .libs/error.o .libs/commentator.o .libs/debug.o 
libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libutil.a
libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" )
make[4]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
Making all in element
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
Making all in field
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
Making all in randiter
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../linbox    -O2 -Wall -DDISABLE_COMMENTATOR     -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o mersenne-twister.lo mersenne-twister.C
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../linbox -O2 -Wall -DDISABLE_COMMENTATOR -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c mersenne-twister.C  -fPIC -DPIC -o .libs/mersenne-twister.o
/bin/sh ../../libtool --tag=CXX   --mode=link x86_64-pc-linux-gnu-g++ -O2 -Wall -DDISABLE_COMMENTATOR     -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS  -Wl,-O1 -Wl,--as-needed -o libranditer.la  mersenne-twister.lo  -lcblas   -lgmpxx -lgmp -lgivaro
libtool: link: x86_64-pc-linux-gnu-ar cru .libs/libranditer.a .libs/mersenne-twister.o 
libtool: link: x86_64-pc-linux-gnu-ranlib .libs/libranditer.a
libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" )
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
Making all in vector
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
Making all in matrix
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
Making all in blackbox
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
Making all in switch
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
Making all in algorithms
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
Making all in solutions
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
Making all in fflas
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
Making all in ffpack
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
Making all in ring
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
/bin/sh ../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I..    -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o dummy.lo dummy.C
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I.. -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c dummy.C  -fPIC -DPIC -o .libs/dummy.o
/bin/sh ../libtool --tag=CXX   --mode=link x86_64-pc-linux-gnu-g++  -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS  -Wl,-O1 -Wl,--as-needed -o liblinbox.la -rpath /usr/lib64 dummy.lo util/libutil.la randiter/libranditer.la -lcblas   -lgmpxx -lgmp -lgivaro
libtool: link: x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtbeginS.o  .libs/dummy.o  -Wl,--whole-archive util/.libs/libutil.a randiter/.libs/libranditer.a -Wl,--no-whole-archive  -Wl,--as-needed -lcblas /usr/lib64/libgmpxx.so -L/usr/lib64 /usr/lib64/libgmp.so -lgivaro -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crtn.o  -march=k8 -Wl,-O1   -Wl,-soname -Wl,liblinbox.so.0 -o .libs/liblinbox.so.0.0.0
libtool: link: (cd ".libs" && rm -f "liblinbox.so.0" && ln -s "liblinbox.so.0.0.0" "liblinbox.so.0")
libtool: link: (cd ".libs" && rm -f "liblinbox.so" && ln -s "liblinbox.so.0.0.0" "liblinbox.so")
libtool: link: ( cd ".libs" && rm -f "liblinbox.la" && ln -s "../liblinbox.la" "liblinbox.la" )
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
Making all in macros
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
Making all in tests
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
Making all in data
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
Making all in interfaces
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
Making all in driver
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
Making all in kaapi
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
Making all in maple
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
Making all in sage
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
/bin/sh ../../libtool --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I. -I../../linbox   -O2 -DDISABLE_COMMENTATOR     -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -c -o linbox-sage.lo linbox-sage.C
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I. -I../../linbox -O2 -DDISABLE_COMMENTATOR -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -c linbox-sage.C  -fPIC -DPIC -o .libs/linbox-sage.o
/bin/sh ../../libtool --tag=CXX   --mode=link x86_64-pc-linux-gnu-g++ -O2 -DDISABLE_COMMENTATOR     -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox     -D__LINBOX_HAVE_CBLAS -lgivaro -lgmpxx -lgmp -lntl -lcblas     -version-info 0:0:0  -Wl,-O1 -Wl,--as-needed -o liblinboxsage.la -rpath /usr/lib64 linbox-sage.lo ../../linbox/liblinbox.la -lcblas   -lgmpxx -lgmp -lgivaro
libtool: link: warning: `/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/libgmpxx.la' seems to be moved
libtool: link: warning: `/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/libgmp.la' seems to be moved
libtool: link: x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtbeginS.o  .libs/linbox-sage.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/.libs -lntl -Wl,--as-needed ../../linbox/.libs/liblinbox.so -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64 -L/usr/lib64 -lcblas /usr/lib64/libgmpxx.so /usr/lib64/libgmp.so -lgivaro -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crtn.o  -march=k8 -Wl,-O1   -Wl,-soname -Wl,liblinboxsage.so.0 -o .libs/liblinboxsage.so.0.0.0
libtool: link: (cd ".libs" && rm -f "liblinboxsage.so.0" && ln -s "liblinboxsage.so.0.0.0" "liblinboxsage.so.0")
libtool: link: (cd ".libs" && rm -f "liblinboxsage.so" && ln -s "liblinboxsage.so.0.0.0" "liblinboxsage.so")
libtool: link: ( cd ".libs" && rm -f "liblinboxsage.la" && ln -s "../liblinboxsage.la" "liblinboxsage.la" )
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
Making all in doc
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
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make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
Making all in examples
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
Making all in fields
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
make[2]: Nothing to be done for `all-am'.
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
>>> Source compiled.
>>> Test phase [not enabled]: sci-libs/linbox-1.1.6-r3

>>> Install linbox-1.1.6-r3 into /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/ category sci-libs
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6"
make -j3 DESTDIR=/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/ install 
Making install in linbox
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
Making install in util
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
Making install in formats
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[4]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[4]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/util/formats" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/util/formats"
 /usr/bin/install -c -m 644 generic-dense.h maple.h matrix-market.h sms.h matrix-stream-readers.h sparse-row.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/util/formats'
make[4]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util/formats'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
make[4]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
make[4]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/util" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/util"
 /usr/bin/install -c -m 644 debug.h error.h commentator.h contracts.h timer.h prime-stream.h field-axpy.h matrix-stream.h matrix-stream.inl mpicpp.h mpicpp.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/util'
make[4]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/util'
Making install in element
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/element" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/element"
 /usr/bin/install -c -m 644 abstract.h archetype.h envelope.h givaro-polynomial.h gmp-rational.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/element'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/element'
Making install in field
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/field" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/field"
 /usr/bin/install -c -m 644 field-interface.h field-traits.h rebind.h abstract.h archetype.h envelope.h unparametric.h param-fuzzy.h gmp-rational.h modular.h modular.inl modular-int.h modular-int32.h modular-short.h modular-byte.h modular-balanced-double.h modular-balanced-float.h modular-balanced-int.h modular-balanced-int32.h modular-double.h modular-float.h gf2.h gf2.inl hom.h map.h PIR-modular-int.h PIR-modular-int32.h local2_32.h PID-integer.h PID-double.h block-ring.h multimod-field.h ntl.h ntl-RR.h ntl-ZZ_p.h ntl-ZZ_pE.h ntl-ZZ_pX.h ntl-lzz_p.h ntl-ZZ.h ntl-lzz_pE.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/field'
 /usr/bin/install -c -m 644 ntl-lzz_pX.h ntl-GF2E.h ntl-pid-lzz_p.h PIR-ntl-ZZ_p.h givaro.h givaro-zpz.h givaro-montg.h givaro-zpz.inl givaro-gfq.h givaro-extension.h givaro-rational.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/field'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/field'
Making install in randiter
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/randiter" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/randiter"
 /usr/bin/install -c -m 644 abstract.h archetype.h envelope.h gmp-rational.h param-fuzzy.h modular.h modular-balanced.h unparametric.h gf2.h nonzero.h mersenne-twister.h ntl-ZZ.h random-prime.h gmp-random-prime.h random-fftprime.h multimod-randomprime.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/randiter'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/randiter'
Making install in vector
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/vector" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/vector"
 /usr/bin/install -c -m 644 pair.h light_container.h sparse.h vector-traits.h subvector.h subiterator.h reverse.h random.h stream.h bit-vector.h bit-vector.inl vector-domain.h vector-domain.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/vector'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/vector'
Making install in matrix
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/matrix" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/matrix"
 /usr/bin/install -c -m 644 archetype.h sparse.h sparse.inl transpose-matrix.h dense.h dense.inl dense-submatrix.h dense-submatrix.inl dense-rows-matrix.h matrix-domain.h matrix-domain.inl matrix-category.h blas-matrix.h factorized-matrix.h factorized-matrix.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/matrix'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/matrix'
Making install in blackbox
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/blackbox" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/blackbox"
 /usr/bin/install -c -m 644 archetype.h factory.h butterfly.h hilbert.h compose.h permutation.h squarize.h sparse1.h sparse.h sparse.inl scalar-matrix.h submatrix.h inverse.h transpose.h sum.h diagonal.h moore-penrose.h dense.h dense.inl direct-sum.h null-matrix.h matrix-blackbox.h dif.h companion.h frobenius.h zero-one.h zero-one.inl triplesbb.h apply.h submatrix-traits.h random-matrix-traits.h scompose.h blackbox-interface.h random-matrix.h lambda-sparse.h blas-blackbox.h polynomial.h block-hankel.h block-toeplitz.h block-hankel-inverse.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/blackbox'
 /usr/bin/install -c -m 644 jit-matrix.h toeplitz.h ntl-hankel.h ntl-sylvester.h toeplitz.inl ntl-hankel.inl ntl-sylvester.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/blackbox'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/blackbox'
Making install in switch
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/switch" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/switch"
 /usr/bin/install -c -m 644 boolean.h cekstv.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/switch'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/switch'
Making install in algorithms
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/algorithms" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/algorithms"
 /usr/bin/install -c -m 644 blackbox-container.h blackbox-container-symmetric.h blackbox-container-symmetrize.h blackbox-container-base.h bbsolve.h double-det.h massey-domain.h wiedemann.h wiedemann.inl lanczos.h lanczos.inl block-lanczos.h block-lanczos.inl mg-block-lanczos.h mg-block-lanczos.inl la-block-lanczos.h la-block-lanczos.inl eliminator.h eliminator.inl gauss.h gauss.inl gauss-det.inl gauss-rank.inl gauss-solve.inl gauss-elim.inl gauss-pivot.inl triangular-solve.h dense-container.h cra-mpi.h cra-kaapi.h cra-domain.h cra-early-multip.h cra-early-single.h cra-full-multip.h lazy-product.h rational-cra.h rational-cra-early-multip.h rational-cra-early-single.h rational-cra-full-multip.h blas-domain.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/algorithms'
 /usr/bin/install -c -m 644 blas-domain.inl bitonic-sort.h blackbox-block-container-base.h blackbox-block-container.h block-massey-domain.h block-wiedemann.h default.h signature.h smith-form-iliopoulos.h one-invariant-factor.h last-invariant-factor.h hybrid-det.h lifting-container.h smith-form-local.h smith-form-local2.h matrix-inverse.h matrix-hom.h matrix-rank.h rational-reconstruction.h rational-solver.h rational-solver.inl diophantine-solver.h diophantine-solver.inl smith-form-binary.h smith-form-adaptive.h smith-form-adaptive.inl smith-form-sparseelim-local.h rational-reconstruction2.h rational-solver-adaptive.h vector-fraction.h cia.h bbcharpoly.h minpoly-integer.h sigma-basis.h matpoly-mult.h echelon-form.h toeplitz-det.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/algorithms'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/algorithms'
Making install in solutions
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/solutions" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/solutions"
 /usr/bin/install -c -m 644 methods.h minpoly.h rank.h trace.h getentry.h det.h solve.h is-positive-definite.h is-positive-semidefinite.h charpoly.h valence.h smith-form.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/solutions'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/solutions'
Making install in fflas
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/fflas" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/fflas"
 /usr/bin/install -c -m 644 fflas.h fflas_fgemm.inl fflas_fgemv.inl fflas_fger.inl fflas_faxpy.inl fflas_fdot.inl fflas_ftrsm.inl fflas_ftrsm_src.inl fflas_ftrmm.inl fflas_ftrmm_src.inl fflas_ftrsv.inl fflas_fcopy.inl fflas_bounds.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/fflas'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/fflas'
Making install in ffpack
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/ffpack" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/ffpack"
 /usr/bin/install -c -m 644 ffpack.h ffpack_charpoly.inl ffpack_charpoly_kglu.inl ffpack_charpoly_kgfast.inl ffpack_charpoly_kgfastgeneralized.inl ffpack_ludivine.inl ffpack_minpoly.inl ffpack_minpoly_construct.inl ffpack_charpoly_danilevski.inl ffpack_krylovelim.inl ffpack_frobenius.inl '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/ffpack'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ffpack'
Making install in ring
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/ring" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/ring"
 /usr/bin/install -c -m 644 ring-interface.h givaro-polynomial.h abstract.h archetype.h envelope.h poweroftwomodular.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/ring'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox/ring'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
test -z "/usr/lib64" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64"
test -z "/usr/include/linbox" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox"
 /bin/sh ../libtool   --mode=install /usr/bin/install -c   liblinbox.la '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64'
 /usr/bin/install -c -m 644 integer.h integer.inl config-blas.h linbox-config.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox'
libtool: install: /usr/bin/install -c .libs/liblinbox.so.0.0.0 /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64/liblinbox.so.0.0.0
libtool: install: (cd /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64 && { ln -s -f liblinbox.so.0.0.0 liblinbox.so.0 || { rm -f liblinbox.so.0 && ln -s liblinbox.so.0.0.0 liblinbox.so.0; }; })
libtool: install: (cd /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64 && { ln -s -f liblinbox.so.0.0.0 liblinbox.so || { rm -f liblinbox.so && ln -s liblinbox.so.0.0.0 liblinbox.so; }; })
libtool: install: /usr/bin/install -c .libs/liblinbox.lai /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64/liblinbox.la
libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox'
Making install in macros
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
make[2]: Nothing to be done for `install-exec-am'.
make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/macros'
Making install in tests
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
Making install in data
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests/data'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/tests'
Making install in interfaces
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
Making install in driver
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
test -z "/usr/lib64" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64"
test -z "/usr/include/linbox" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox"
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/driver'
Making install in kaapi
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
make[3]: Nothing to be done for `install-exec-am'.
test -z "/usr/include/linbox/kaapi" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/kaapi"
 /usr/bin/install -c -m 644 communicate.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox/kaapi'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/kaapi'
Making install in maple
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
test -z "/usr/lib64" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64"
test -z "/usr/include/linbox" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox"
make  install-data-hook
make[4]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
make[4]: Nothing to be done for `install-data-hook'.
make[4]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/maple'
Making install in sage
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
test -z "/usr/lib64" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64"
test -z "/usr/include/linbox" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox"
 /bin/sh ../../libtool   --mode=install /usr/bin/install -c   liblinboxsage.la '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64'
 /usr/bin/install -c -m 644 linbox-sage.h '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/include/linbox'
libtool: install: warning: relinking `liblinboxsage.la'
libtool: install: (cd /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage; /bin/sh /var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/libtool  --tag CXX --mode=relink x86_64-pc-linux-gnu-g++ -O2 -DDISABLE_COMMENTATOR -march=k8 -O2 -pipe -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6 -I/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/linbox -D__LINBOX_HAVE_CBLAS -lgivaro -lgmpxx -lgmp -lntl -lcblas -version-info 0:0:0 -Wl,-O1 -Wl,--as-needed -o liblinboxsage.la -rpath /usr/lib64 linbox-sage.lo ../../linbox/liblinbox.la -lcblas -lgmpxx -lgmp -lgivaro -inst-prefix-dir /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/)
libtool: relink: warning: `/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/libgmpxx.la' seems to be moved
libtool: relink: warning: `/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/libgmp.la' seems to be moved
libtool: relink: x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtbeginS.o  .libs/linbox-sage.o   -lntl -Wl,--as-needed -L/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64 -L/usr/lib64 -llinbox -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64 -lcblas -lgmpxx -lgmp -lgivaro -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../lib64/crtn.o  -march=k8 -Wl,-O1   -Wl,-soname -Wl,liblinboxsage.so.0 -o .libs/liblinboxsage.so.0.0.0
libtool: install: /usr/bin/install -c .libs/liblinboxsage.so.0.0.0T /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64/liblinboxsage.so.0.0.0
libtool: install: (cd /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64 && { ln -s -f liblinboxsage.so.0.0.0 liblinboxsage.so.0 || { rm -f liblinboxsage.so.0 && ln -s liblinboxsage.so.0.0.0 liblinboxsage.so.0; }; })
libtool: install: (cd /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64 && { ln -s -f liblinboxsage.so.0.0.0 liblinboxsage.so || { rm -f liblinboxsage.so && ln -s liblinboxsage.so.0.0.0 liblinboxsage.so; }; })
libtool: install: /usr/bin/install -c .libs/liblinboxsage.lai /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/lib64/liblinboxsage.la
libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces/sage'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/interfaces'
Making install in doc
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
make[2]: Nothing to be done for `install-exec-am'.
test -z "/usr/share/man/man1" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/share/man/man1"
 /usr/bin/install -c -m 644 linbox-config.1 '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/share/man/man1'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/doc'
Making install in examples
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
Making install in fields
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples/fields'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[3]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6/examples'
make[1]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
make[2]: Entering directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
test -z "/usr/bin" || /bin/mkdir -p "/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/bin"
make[2]: Nothing to be done for `install-data-am'.
 /usr/bin/install -c linbox-config '/var/tmp/portage/sci-libs/linbox-1.1.6-r3/image//usr/bin'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
make[1]: Leaving directory `/var/tmp/portage/sci-libs/linbox-1.1.6-r3/work/linbox-1.1.6'
Removing unnecessary /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/usr/lib64/liblinbox.la
Removing unnecessary /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/usr/lib64/liblinboxsage.la
>>> Completed installing linbox-1.1.6-r3 into /var/tmp/portage/sci-libs/linbox-1.1.6-r3/image/

strip: x86_64-pc-linux-gnu-strip --strip-unneeded -R .comment
   usr/lib64/liblinboxsage.so.0.0.0
   usr/lib64/liblinbox.so.0.0.0
ecompressdir: bzip2 -9 /usr/share/man
 * checking 303 files for package collisions
--- /usr/
--- /usr/lib64/
>>> /usr/lib64/liblinboxsage.so -> liblinboxsage.so.0.0.0
>>> /usr/lib64/liblinboxsage.so.0 -> liblinboxsage.so.0.0.0
>>> /usr/lib64/liblinboxsage.so.0.0.0
>>> /usr/lib64/liblinbox.so.0 -> liblinbox.so.0.0.0
>>> /usr/lib64/liblinbox.so.0.0.0
>>> /usr/lib64/liblinbox.so -> liblinbox.so.0.0.0
--- /usr/include/
--- /usr/include/linbox/
>>> /usr/include/linbox/config-blas.h
--- /usr/include/linbox/element/
>>> /usr/include/linbox/element/givaro-polynomial.h
>>> /usr/include/linbox/element/envelope.h
>>> /usr/include/linbox/element/gmp-rational.h
>>> /usr/include/linbox/element/abstract.h
>>> /usr/include/linbox/element/archetype.h
--- /usr/include/linbox/solutions/
>>> /usr/include/linbox/solutions/rank.h
>>> /usr/include/linbox/solutions/trace.h
>>> /usr/include/linbox/solutions/valence.h
>>> /usr/include/linbox/solutions/solve.h
>>> /usr/include/linbox/solutions/smith-form.h
>>> /usr/include/linbox/solutions/charpoly.h
>>> /usr/include/linbox/solutions/is-positive-definite.h
>>> /usr/include/linbox/solutions/det.h
>>> /usr/include/linbox/solutions/getentry.h
>>> /usr/include/linbox/solutions/is-positive-semidefinite.h
>>> /usr/include/linbox/solutions/minpoly.h
>>> /usr/include/linbox/solutions/methods.h
--- /usr/include/linbox/switch/
>>> /usr/include/linbox/switch/cekstv.h
>>> /usr/include/linbox/switch/boolean.h
--- /usr/include/linbox/randiter/
>>> /usr/include/linbox/randiter/nonzero.h
>>> /usr/include/linbox/randiter/envelope.h
>>> /usr/include/linbox/randiter/multimod-randomprime.h
>>> /usr/include/linbox/randiter/random-fftprime.h
>>> /usr/include/linbox/randiter/gmp-rational.h
>>> /usr/include/linbox/randiter/gf2.h
>>> /usr/include/linbox/randiter/abstract.h
>>> /usr/include/linbox/randiter/mersenne-twister.h
>>> /usr/include/linbox/randiter/archetype.h
>>> /usr/include/linbox/randiter/unparametric.h
>>> /usr/include/linbox/randiter/param-fuzzy.h
>>> /usr/include/linbox/randiter/modular-balanced.h
>>> /usr/include/linbox/randiter/gmp-random-prime.h
>>> /usr/include/linbox/randiter/random-prime.h
>>> /usr/include/linbox/randiter/ntl-ZZ.h
>>> /usr/include/linbox/randiter/modular.h
--- /usr/include/linbox/util/
--- /usr/include/linbox/util/formats/
>>> /usr/include/linbox/util/formats/generic-dense.h
>>> /usr/include/linbox/util/formats/sms.h
>>> /usr/include/linbox/util/formats/matrix-market.h
>>> /usr/include/linbox/util/formats/maple.h
>>> /usr/include/linbox/util/formats/matrix-stream-readers.h
>>> /usr/include/linbox/util/formats/sparse-row.h
>>> /usr/include/linbox/util/contracts.h
>>> /usr/include/linbox/util/field-axpy.h
>>> /usr/include/linbox/util/mpicpp.inl
>>> /usr/include/linbox/util/timer.h
>>> /usr/include/linbox/util/prime-stream.h
>>> /usr/include/linbox/util/matrix-stream.h
>>> /usr/include/linbox/util/debug.h
>>> /usr/include/linbox/util/mpicpp.h
>>> /usr/include/linbox/util/matrix-stream.inl
>>> /usr/include/linbox/util/commentator.h
>>> /usr/include/linbox/util/error.h
--- /usr/include/linbox/vector/
>>> /usr/include/linbox/vector/random.h
>>> /usr/include/linbox/vector/light_container.h
>>> /usr/include/linbox/vector/reverse.h
>>> /usr/include/linbox/vector/stream.h
>>> /usr/include/linbox/vector/subiterator.h
>>> /usr/include/linbox/vector/vector-domain.h
>>> /usr/include/linbox/vector/pair.h
>>> /usr/include/linbox/vector/sparse.h
>>> /usr/include/linbox/vector/bit-vector.h
>>> /usr/include/linbox/vector/bit-vector.inl
>>> /usr/include/linbox/vector/vector-traits.h
>>> /usr/include/linbox/vector/vector-domain.inl
>>> /usr/include/linbox/vector/subvector.h
--- /usr/include/linbox/ring/
>>> /usr/include/linbox/ring/givaro-polynomial.h
>>> /usr/include/linbox/ring/envelope.h
>>> /usr/include/linbox/ring/ring-interface.h
>>> /usr/include/linbox/ring/abstract.h
>>> /usr/include/linbox/ring/archetype.h
>>> /usr/include/linbox/ring/poweroftwomodular.h
--- /usr/include/linbox/algorithms/
>>> /usr/include/linbox/algorithms/double-det.h
>>> /usr/include/linbox/algorithms/bbcharpoly.h
>>> /usr/include/linbox/algorithms/matrix-hom.h
>>> /usr/include/linbox/algorithms/smith-form-local.h
>>> /usr/include/linbox/algorithms/rational-cra-full-multip.h
>>> /usr/include/linbox/algorithms/wiedemann.inl
>>> /usr/include/linbox/algorithms/matrix-rank.h
>>> /usr/include/linbox/algorithms/sigma-basis.h
>>> /usr/include/linbox/algorithms/matrix-inverse.h
>>> /usr/include/linbox/algorithms/smith-form-adaptive.h
>>> /usr/include/linbox/algorithms/cra-early-multip.h
>>> /usr/include/linbox/algorithms/eliminator.inl
>>> /usr/include/linbox/algorithms/diophantine-solver.inl
>>> /usr/include/linbox/algorithms/matpoly-mult.h
>>> /usr/include/linbox/algorithms/gauss.h
>>> /usr/include/linbox/algorithms/gauss.inl
>>> /usr/include/linbox/algorithms/smith-form-adaptive.inl
>>> /usr/include/linbox/algorithms/cra-kaapi.h
>>> /usr/include/linbox/algorithms/wiedemann.h
>>> /usr/include/linbox/algorithms/mg-block-lanczos.h
>>> /usr/include/linbox/algorithms/bbsolve.h
>>> /usr/include/linbox/algorithms/blackbox-block-container-base.h
>>> /usr/include/linbox/algorithms/smith-form-sparseelim-local.h
>>> /usr/include/linbox/algorithms/one-invariant-factor.h
>>> /usr/include/linbox/algorithms/block-wiedemann.h
>>> /usr/include/linbox/algorithms/cra-domain.h
>>> /usr/include/linbox/algorithms/gauss-rank.inl
>>> /usr/include/linbox/algorithms/block-massey-domain.h
>>> /usr/include/linbox/algorithms/rational-solver.inl
>>> /usr/include/linbox/algorithms/mg-block-lanczos.inl
>>> /usr/include/linbox/algorithms/smith-form-binary.h
>>> /usr/include/linbox/algorithms/cra-mpi.h
>>> /usr/include/linbox/algorithms/cra-full-multip.h
>>> /usr/include/linbox/algorithms/blackbox-container.h
>>> /usr/include/linbox/algorithms/smith-form-iliopoulos.h
>>> /usr/include/linbox/algorithms/rational-reconstruction2.h
>>> /usr/include/linbox/algorithms/rational-cra-early-single.h
>>> /usr/include/linbox/algorithms/lazy-product.h
>>> /usr/include/linbox/algorithms/lifting-container.h
>>> /usr/include/linbox/algorithms/cia.h
>>> /usr/include/linbox/algorithms/blackbox-container-symmetrize.h
>>> /usr/include/linbox/algorithms/rational-cra-early-multip.h
>>> /usr/include/linbox/algorithms/blackbox-container-base.h
>>> /usr/include/linbox/algorithms/blackbox-container-symmetric.h
>>> /usr/include/linbox/algorithms/lanczos.inl
>>> /usr/include/linbox/algorithms/la-block-lanczos.h
>>> /usr/include/linbox/algorithms/blas-domain.h
>>> /usr/include/linbox/algorithms/triangular-solve.h
>>> /usr/include/linbox/algorithms/signature.h
>>> /usr/include/linbox/algorithms/rational-reconstruction.h
>>> /usr/include/linbox/algorithms/rational-cra.h
>>> /usr/include/linbox/algorithms/blas-domain.inl
>>> /usr/include/linbox/algorithms/bitonic-sort.h
>>> /usr/include/linbox/algorithms/rational-solver-adaptive.h
>>> /usr/include/linbox/algorithms/smith-form-local2.h
>>> /usr/include/linbox/algorithms/gauss-det.inl
>>> /usr/include/linbox/algorithms/lanczos.h
>>> /usr/include/linbox/algorithms/gauss-solve.inl
>>> /usr/include/linbox/algorithms/last-invariant-factor.h
>>> /usr/include/linbox/algorithms/vector-fraction.h
>>> /usr/include/linbox/algorithms/dense-container.h
>>> /usr/include/linbox/algorithms/echelon-form.h
>>> /usr/include/linbox/algorithms/block-lanczos.h
>>> /usr/include/linbox/algorithms/blackbox-block-container.h
>>> /usr/include/linbox/algorithms/massey-domain.h
>>> /usr/include/linbox/algorithms/toeplitz-det.h
>>> /usr/include/linbox/algorithms/gauss-elim.inl
>>> /usr/include/linbox/algorithms/diophantine-solver.h
>>> /usr/include/linbox/algorithms/eliminator.h
>>> /usr/include/linbox/algorithms/hybrid-det.h
>>> /usr/include/linbox/algorithms/la-block-lanczos.inl
>>> /usr/include/linbox/algorithms/gauss-pivot.inl
>>> /usr/include/linbox/algorithms/default.h
>>> /usr/include/linbox/algorithms/rational-solver.h
>>> /usr/include/linbox/algorithms/cra-early-single.h
>>> /usr/include/linbox/algorithms/minpoly-integer.h
>>> /usr/include/linbox/algorithms/block-lanczos.inl
>>> /usr/include/linbox/linbox-sage.h
--- /usr/include/linbox/blackbox/
>>> /usr/include/linbox/blackbox/ntl-sylvester.inl
>>> /usr/include/linbox/blackbox/ntl-hankel.h
>>> /usr/include/linbox/blackbox/toeplitz.h
>>> /usr/include/linbox/blackbox/companion.h
>>> /usr/include/linbox/blackbox/matrix-blackbox.h
>>> /usr/include/linbox/blackbox/random-matrix.h
>>> /usr/include/linbox/blackbox/ntl-sylvester.h
>>> /usr/include/linbox/blackbox/moore-penrose.h
>>> /usr/include/linbox/blackbox/dense.h
>>> /usr/include/linbox/blackbox/direct-sum.h
>>> /usr/include/linbox/blackbox/toeplitz.inl
>>> /usr/include/linbox/blackbox/sum.h
>>> /usr/include/linbox/blackbox/block-hankel.h
>>> /usr/include/linbox/blackbox/blackbox-interface.h
>>> /usr/include/linbox/blackbox/scompose.h
>>> /usr/include/linbox/blackbox/block-toeplitz.h
>>> /usr/include/linbox/blackbox/apply.h
>>> /usr/include/linbox/blackbox/zero-one.h
>>> /usr/include/linbox/blackbox/block-hankel-inverse.h
>>> /usr/include/linbox/blackbox/compose.h
>>> /usr/include/linbox/blackbox/dense.inl
>>> /usr/include/linbox/blackbox/ntl-hankel.inl
>>> /usr/include/linbox/blackbox/inverse.h
>>> /usr/include/linbox/blackbox/jit-matrix.h
>>> /usr/include/linbox/blackbox/permutation.h
>>> /usr/include/linbox/blackbox/sparse1.h
>>> /usr/include/linbox/blackbox/polynomial.h
>>> /usr/include/linbox/blackbox/sparse.h
>>> /usr/include/linbox/blackbox/sparse.inl
>>> /usr/include/linbox/blackbox/archetype.h
>>> /usr/include/linbox/blackbox/dif.h
>>> /usr/include/linbox/blackbox/frobenius.h
>>> /usr/include/linbox/blackbox/zero-one.inl
>>> /usr/include/linbox/blackbox/butterfly.h
>>> /usr/include/linbox/blackbox/submatrix-traits.h
>>> /usr/include/linbox/blackbox/triplesbb.h
>>> /usr/include/linbox/blackbox/hilbert.h
>>> /usr/include/linbox/blackbox/factory.h
>>> /usr/include/linbox/blackbox/submatrix.h
>>> /usr/include/linbox/blackbox/blas-blackbox.h
>>> /usr/include/linbox/blackbox/scalar-matrix.h
>>> /usr/include/linbox/blackbox/squarize.h
>>> /usr/include/linbox/blackbox/null-matrix.h
>>> /usr/include/linbox/blackbox/lambda-sparse.h
>>> /usr/include/linbox/blackbox/diagonal.h
>>> /usr/include/linbox/blackbox/random-matrix-traits.h
>>> /usr/include/linbox/blackbox/transpose.h
--- /usr/include/linbox/field/
>>> /usr/include/linbox/field/modular-balanced-int32.h
>>> /usr/include/linbox/field/ntl-GF2E.h
>>> /usr/include/linbox/field/ntl-ZZ_pX.h
>>> /usr/include/linbox/field/modular-balanced-float.h
>>> /usr/include/linbox/field/field-traits.h
>>> /usr/include/linbox/field/local2_32.h
>>> /usr/include/linbox/field/givaro-gfq.h
>>> /usr/include/linbox/field/ntl-lzz_pX.h
>>> /usr/include/linbox/field/ntl-ZZ_pE.h
>>> /usr/include/linbox/field/givaro-zpz.h
>>> /usr/include/linbox/field/givaro-zpz.inl
>>> /usr/include/linbox/field/hom.h
>>> /usr/include/linbox/field/gf2.inl
>>> /usr/include/linbox/field/modular-balanced-int.h
>>> /usr/include/linbox/field/ntl-lzz_pE.h
>>> /usr/include/linbox/field/envelope.h
>>> /usr/include/linbox/field/modular-byte.h
>>> /usr/include/linbox/field/multimod-field.h
>>> /usr/include/linbox/field/ntl-pid-lzz_p.h
>>> /usr/include/linbox/field/map.h
>>> /usr/include/linbox/field/gmp-rational.h
>>> /usr/include/linbox/field/givaro.h
>>> /usr/include/linbox/field/modular-balanced-double.h
>>> /usr/include/linbox/field/gf2.h
>>> /usr/include/linbox/field/PIR-ntl-ZZ_p.h
>>> /usr/include/linbox/field/PID-integer.h
>>> /usr/include/linbox/field/abstract.h
>>> /usr/include/linbox/field/block-ring.h
>>> /usr/include/linbox/field/PIR-modular-int.h
>>> /usr/include/linbox/field/modular-float.h
>>> /usr/include/linbox/field/modular.inl
>>> /usr/include/linbox/field/archetype.h
>>> /usr/include/linbox/field/ntl-ZZ_p.h
>>> /usr/include/linbox/field/givaro-montg.h
>>> /usr/include/linbox/field/modular-int.h
>>> /usr/include/linbox/field/modular-short.h
>>> /usr/include/linbox/field/modular-double.h
>>> /usr/include/linbox/field/field-interface.h
>>> /usr/include/linbox/field/rebind.h
>>> /usr/include/linbox/field/unparametric.h
>>> /usr/include/linbox/field/ntl.h
>>> /usr/include/linbox/field/ntl-lzz_p.h
>>> /usr/include/linbox/field/PID-double.h
>>> /usr/include/linbox/field/param-fuzzy.h
>>> /usr/include/linbox/field/PIR-modular-int32.h
>>> /usr/include/linbox/field/ntl-RR.h
>>> /usr/include/linbox/field/givaro-rational.h
>>> /usr/include/linbox/field/modular-int32.h
>>> /usr/include/linbox/field/ntl-ZZ.h
>>> /usr/include/linbox/field/givaro-extension.h
>>> /usr/include/linbox/field/modular.h
>>> /usr/include/linbox/linbox-config.h
--- /usr/include/linbox/kaapi/
>>> /usr/include/linbox/kaapi/communicate.h
--- /usr/include/linbox/matrix/
>>> /usr/include/linbox/matrix/transpose-matrix.h
>>> /usr/include/linbox/matrix/dense.h
>>> /usr/include/linbox/matrix/matrix-category.h
>>> /usr/include/linbox/matrix/blas-matrix.h
>>> /usr/include/linbox/matrix/matrix-domain.inl
>>> /usr/include/linbox/matrix/matrix-domain.h
>>> /usr/include/linbox/matrix/dense.inl
>>> /usr/include/linbox/matrix/factorized-matrix.inl
>>> /usr/include/linbox/matrix/sparse.h
>>> /usr/include/linbox/matrix/sparse.inl
>>> /usr/include/linbox/matrix/factorized-matrix.h
>>> /usr/include/linbox/matrix/archetype.h
>>> /usr/include/linbox/matrix/dense-rows-matrix.h
>>> /usr/include/linbox/matrix/dense-submatrix.inl
>>> /usr/include/linbox/matrix/dense-submatrix.h
--- /usr/include/linbox/ffpack/
>>> /usr/include/linbox/ffpack/ffpack_frobenius.inl
>>> /usr/include/linbox/ffpack/ffpack_charpoly_kglu.inl
>>> /usr/include/linbox/ffpack/ffpack_charpoly_kgfastgeneralized.inl
>>> /usr/include/linbox/ffpack/ffpack_charpoly_danilevski.inl
>>> /usr/include/linbox/ffpack/ffpack_charpoly.inl
>>> /usr/include/linbox/ffpack/ffpack_minpoly_construct.inl
>>> /usr/include/linbox/ffpack/ffpack_charpoly_kgfast.inl
>>> /usr/include/linbox/ffpack/ffpack.h
>>> /usr/include/linbox/ffpack/ffpack_krylovelim.inl
>>> /usr/include/linbox/ffpack/ffpack_minpoly.inl
>>> /usr/include/linbox/ffpack/ffpack_ludivine.inl
>>> /usr/include/linbox/integer.inl
>>> /usr/include/linbox/integer.h
--- /usr/include/linbox/fflas/
>>> /usr/include/linbox/fflas/fflas_fgemv.inl
>>> /usr/include/linbox/fflas/fflas_ftrsm_src.inl
>>> /usr/include/linbox/fflas/fflas_ftrmm.inl
>>> /usr/include/linbox/fflas/fflas_fcopy.inl
>>> /usr/include/linbox/fflas/fflas_fgemm.inl
>>> /usr/include/linbox/fflas/fflas.h
>>> /usr/include/linbox/fflas/fflas_ftrsv.inl
>>> /usr/include/linbox/fflas/fflas_ftrmm_src.inl
>>> /usr/include/linbox/fflas/fflas_ftrsm.inl
>>> /usr/include/linbox/fflas/fflas_fger.inl
>>> /usr/include/linbox/fflas/fflas_bounds.inl
>>> /usr/include/linbox/fflas/fflas_fdot.inl
>>> /usr/include/linbox/fflas/fflas_faxpy.inl
--- /usr/share/
--- /usr/share/man/
--- /usr/share/man/man1/
>>> /usr/share/man/man1/linbox-config.1.bz2
--- /usr/share/doc/
--- /usr/share/doc/linbox-1.1.6-r3/
>>> /usr/share/doc/linbox-1.1.6-r3/README.bz2
>>> /usr/share/doc/linbox-1.1.6-r3/TODO.bz2
>>> /usr/share/doc/linbox-1.1.6-r3/NEWS.bz2
>>> /usr/share/doc/linbox-1.1.6-r3/ChangeLog.bz2
--- /usr/bin/
>>> /usr/bin/linbox-config
>>> Safely unmerging already-installed instance...
>>> Original instance of package unmerged safely.
 * One template shipped with linbox needs to be compiled against
 * lapack. If you use linbox/algorithms/rational-solver.inl you may
 * have to add -llapack to your flags.
>>> Regenerating /etc/ld.so.cache...

^ permalink raw reply	[flat|nested] 8+ messages in thread

* Re: [gentoo-science] undefined symbol: dgetri_  --  again.
  2010-10-12  9:32           ` v_2e
@ 2010-10-12 10:02             ` François Bissey
  0 siblings, 0 replies; 8+ messages in thread
From: François Bissey @ 2010-10-12 10:02 UTC (permalink / raw
  To: gentoo-science

> On Tue, 12 Oct 2010 21:52:48 +1300
> 
> François Bissey <f.r.bissey@massey.ac.nz> wrote:
> > Basically as far as we understand that's a problem when using gsl for
> > your cblas. There are two workarounds while we work out why it doesn't
> > work for you:
> > 1) switch to atlas cblas
> > or
> > 2) compile gsl with the "static-libs" useflag.
> > Then recompile linbox.
> > 
> > Before you do that, it would be helpful if you sent us a build log of
> > lnbox-1.1.6-r3 and if you know how the configuration log of linbox.
> > 
> > Cheers,
> > Francois
> 
>   I have just re-emerged linbox-1.1.6-r3 without  changing any cblas
> configuration (just to produce a build.log) and Sage now works!
> So I am surprised and I can understand nothing about all this
> situation.
>   I have attached the build.log just in case.
> 
Thank you. That's a relief that it is all working now. I can see from your 
build log that everything should be fine. There is the important line:
checking for C interface to BLAS... found

Which would be different if you still had the problem.

Cheers,
Francois



^ permalink raw reply	[flat|nested] 8+ messages in thread

end of thread, other threads:[~2010-10-12 10:02 UTC | newest]

Thread overview: 8+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2010-10-12  8:07 [gentoo-science] undefined symbol: dgetri_ -- again v_2e
2010-10-12  8:11 ` François Bissey
2010-10-12  8:20   ` v_2e
2010-10-12  8:28     ` François Bissey
2010-10-12  8:40       ` v_2e
2010-10-12  8:52         ` François Bissey
2010-10-12  9:32           ` v_2e
2010-10-12 10:02             ` François Bissey

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