From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1OjApk-0002Or-L1 for garchives@archives.gentoo.org; Wed, 11 Aug 2010 12:55:05 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 21DA4E0992; Wed, 11 Aug 2010 12:54:40 +0000 (UTC) Received: from fsm1.ukr.net (fsm1.ukr.net [195.214.192.23]) by pigeon.gentoo.org (Postfix) with ESMTP id DD7CEE0992 for ; Wed, 11 Aug 2010 12:54:39 +0000 (UTC) Received: from [79.135.196.121] (helo=Ganymede) by fsm1.ukr.net with esmtpsa ID 1OjApK-000DYs-TT ; Wed, 11 Aug 2010 15:54:39 +0300 Date: Wed, 11 Aug 2010 15:55:23 +0300 From: v_2e@ukr.net To: gentoo-science@lists.gentoo.org Subject: Re: [gentoo-science] [sage-on-gentoo] Sage-4.5.2 build problem and a "run-time" errors. Message-Id: <20100811155523.575f47fb.v_2e@ukr.net> In-Reply-To: <201008110946.07612.cschwan@students.uni-mainz.de> References: <20100811091847.69233077.v_2e@ukr.net> <201008110946.07612.cschwan@students.uni-mainz.de> X-Mailer: Sylpheed 3.0.3 (GTK+ 2.20.1; x86_64-pc-linux-gnu) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-science@lists.gentoo.org Reply-to: gentoo-science@lists.gentoo.org Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit X-Archives-Salt: adcef39a-567b-4f80-95cb-a3bbcdeb2a86 X-Archives-Hash: d4f7e219353f575ef9d5d92be4a393e3 Hello! On Wed, 11 Aug 2010 09:46:07 +0200 Christopher Schwan wrote: > > That blocker means that you should remove sage-4.5.1 (its blocking 4.5.1, not > 4.5.2!) first and then perform the upgrade - thats because I have put the > .desktop file from sage into sage-baselayout. Without this blocker there would > be file collisions. > I tried to remove sage-4.5.1 first of all, but it didn't help. sage-baselayout-4.5.2 was still blocking sage-4.5.2 So I had to remove the "DEPEND="!! > The symbol dgetri_ is from lapack which should be removed from linbox; merge > linbox again (make sure its -r3) and try to start Sage. Please report back if > it works or not! I have just reemerged sci-libs/linbox-1.1.6-r3, but it didn't help. I still get the following error message: ########## Qoute begins ########## ImportError Traceback (most recent call last) /usr/lib64/python2.6/site-packages/IPython/ipmaker.pyc in force_import (modname, force_reload) 61 reload(sys.modules[modname]) 62 else: ---> 63 __import__(modname) 64 65 /usr/bin/ipy_profile_sage.py in () 5 preparser(True) 6 ----> 7 import sage.all_cmdline 8 sage.all_cmdline._init_cmdline(globals()) 9 /usr/lib64/python2.6/site-packages/sage/all_cmdline.py in () 12 try: 13 ---> 14 from sage.all import * 15 from sage.calculus.predefined import x 16 preparser(on=True) /usr/lib64/python2.6/site-packages/sage/all.py in () 71 72 from sage.rings.all import * ---> 73 from sage.matrix.all import * 74 75 # This must come before Calculus -- it initializes the Pynac library. /usr/lib64/python2.6/site-packages/sage/matrix/all.py in () ----> 1 2 3 from matrix_space import MatrixSpace, is_MatrixSpace 4 from constructor import matrix, Matrix, random_matrix, diagonal_matrix, identity_matrix, block_matrix, block_diagonal_matrix, jordan_block, zero_matrix 5 from matrix import is_Matrix 6 from berlekamp_massey import berlekamp_massey 7 /usr/lib64/python2.6/site-packages/sage/matrix/matrix_space.pyc in () 35 import matrix_generic_sparse 36 ---> 37 import matrix_modn_dense 38 import matrix_modn_sparse 39 /usr/bin/matrix_integer_dense.pxd in init sage.matrix.matrix_modn_dense (sage/matrix/matrix_modn_dense.c:14829)() 10 11 ---> 12 13 14 /usr/bin/linbox.pxd in init sage.matrix.matrix_integer_dense (sage/matrix/matrix_integer_dense.c:39016)() 5 6 ----> 7 8 9 ImportError: /usr/lib/liblinboxsage.so.0: undefined symbol: dgetri_ Error importing ipy_profile_sage - perhaps you should run %upgrade? WARNING: Loading of ipy_profile_sage failed. ########### Qoute ends ########## Regards, Vladimir -----