From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1OPCyq-0006jZ-64 for garchives@archives.gentoo.org; Thu, 17 Jun 2010 11:09:56 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 76374E09E6; Thu, 17 Jun 2010 11:09:22 +0000 (UTC) Received: from mxi2.callplus.net.nz (mx194.callplus.net.nz [202.180.66.194]) by pigeon.gentoo.org (Postfix) with ESMTP id 04439E09E6 for ; Thu, 17 Jun 2010 11:09:21 +0000 (UTC) X-IronPort-Anti-Spam-Filtered: true X-IronPort-Anti-Spam-Result: Ag0FACqfGUx8xQFN/2dsb2JhbACSW4wccr9yhRoE Received: from 124-197-1-77.callplus.net.nz (HELO vrooom.localnet) ([124.197.1.77]) by ismtp02.callplus.net.nz with ESMTP; 17 Jun 2010 23:09:20 +1200 From: =?iso-8859-1?q?Fran=E7ois_Bissey?= To: gentoo-science@lists.gentoo.org Subject: Re: [gentoo-science] sage-notebook & jmol Date: Thu, 17 Jun 2010 23:09:20 +1200 User-Agent: KMail/1.13.3 (Linux/2.6.32-gentoo-r7; KDE/4.4.4; i686; ; ) References: <1276614668.11584.1@ledaig> In-Reply-To: <1276614668.11584.1@ledaig> Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-science@lists.gentoo.org Reply-to: gentoo-science@lists.gentoo.org MIME-Version: 1.0 Content-Type: Text/Plain; charset="us-ascii" Content-Transfer-Encoding: 7bit Message-Id: <201006172309.20796.f.r.bissey@massey.ac.nz> X-Archives-Salt: bb390c56-63b4-4d48-82ef-f812329f2820 X-Archives-Hash: 5196405ad13d7bf600ca2b191899c53e Hi all, So I committed some changes that makes jmol works at least on my computer. At the moment it requires the version of jmol from the sage-on-gentoo overlay, but it probably would work with the one in the portage tree. I required the "vhosts" useflag for jmol so people don't have to deal with web-app configuration, but it would also works with "-client-only". So it may end up being a recommendation. It has quite a nasty structure as, while there is no link involved as in Steve's first message, the path is explicit in the sage-notebook code. A real clean solution to this will require some changes to the jmol ebuild to install a simple stripped down web applet not requiring web-applet. Happy testing!!! Francois