From: "Björn Thorwirth" <bjoern.thorwirth@uni-due.de>
To: gentoo-science@lists.gentoo.org
Subject: Re: [gentoo-science] sci-biology/blast-db fails digest verification
Date: Fri, 17 Jul 2009 12:38:21 +0200 [thread overview]
Message-ID: <1247827101.13131.3.camel@localhost> (raw)
In-Reply-To: <17e1a1290907161220j340afffdkda7bdcf1d066a372@mail.gmail.com>
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Hi Andrey,
Am Donnerstag, den 16.07.2009, 15:20 -0400 schrieb Andrey Kislyuk:
> Hi Bjoern,
>
> The blast-db package is actually a bit of a problem precisely because
> of the issue you ran into and I'll probably remove it soon. Instead,
> you should use the update_blastdb.pl script that comes with ncbi-tools
> (/usr/share/doc/ncbi-tools*/html/blast/update_blastdb.pl) to download
> the databases and keep them updated.
>
> So what I intend to do in a future ncbi-tools release is move this
> script into /usr/bin and write a tutorial on how to use it, linked
> from the ncbi-tools elog output.
I did it now with the redigest solution, but the use of the perl script
seems to be the better way. Thanks for all your comments.
Best regards,
Bjoern
>
> Thanks
>
> -ak
>
> 2009/7/16 Björn Thorwirth <bjoern.thorwirth@uni-due.de>:
> > Hi!
> > I just noticed this digest verification error.
> >
> > Best regards,
> >
> > Bjoern 'Thorwirth
> > --
> > Bjoern Thorwirth, Zentrum für Medizinische Biotechnologie,
> > Universität Duisburg-Essen, Universitätsstr. 2, 45117 Essen, Germany
> > phone +49 201 183-4026, bjoern.thorwirth@uni-due.de
> >
> >
> >
>
>
--
Bjoern Thorwirth, Zentrum für Medizinische Biotechnologie,
Universität Duisburg-Essen, Universitätsstr. 2, 45117 Essen, Germany
phone +49 201 183-4026, bjoern.thorwirth@uni-due.de
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prev parent reply other threads:[~2009-07-17 10:38 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2009-07-16 13:26 [gentoo-science] sci-biology/blast-db fails digest verification Björn Thorwirth
2009-07-16 13:56 ` Neil Shephard
2009-07-16 15:51 ` Justin
2009-07-17 8:40 ` Łukasz P. Michalik
2009-07-17 9:40 ` Justin
2009-07-16 19:20 ` Andrey Kislyuk
2009-07-17 10:38 ` Björn Thorwirth [this message]
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