From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1Qi5Bx-0006Ie-8u for garchives@archives.gentoo.org; Sat, 16 Jul 2011 13:46:01 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id C04C121C035; Sat, 16 Jul 2011 13:45:43 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id 84E3621C035 for ; Sat, 16 Jul 2011 13:45:43 +0000 (UTC) Received: from pelican.gentoo.org (unknown [66.219.59.40]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 087172AC33F for ; Sat, 16 Jul 2011 13:45:43 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by pelican.gentoo.org (Postfix) with ESMTP id E1A328003D for ; Sat, 16 Jul 2011 13:45:41 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/coot/files/, sci-chemistry/coot/ X-VCS-Repository: proj/sci X-VCS-Files: sci-chemistry/coot/ChangeLog sci-chemistry/coot/files/9999-mmdb-config.patch X-VCS-Directories: sci-chemistry/coot/files/ sci-chemistry/coot/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: d098e9d60d0ea751eee13de02cff23e54cc84d45 Date: Sat, 16 Jul 2011 13:45:41 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: X-Archives-Hash: dad0f87033231e9fd0046ad615f7a77b commit: d098e9d60d0ea751eee13de02cff23e54cc84d45 Author: Justin Lecher gentoo org> AuthorDate: Fri Jul 15 18:15:53 2011 +0000 Commit: Justin Lecher gentoo org> CommitDate: Fri Jul 15 18:15:53 2011 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=3Dproj/sci.git;a=3Dc= ommit;h=3Dd098e9d6 Mmdb fix (Portage version: 2.2.0_alpha45/git/Linux x86_64, signed Manifest commit = with key 70EB7916) --- sci-chemistry/coot/ChangeLog | 3 +++ sci-chemistry/coot/files/9999-mmdb-config.patch | 20 ++++++++++-------= --- 2 files changed, 13 insertions(+), 10 deletions(-) diff --git a/sci-chemistry/coot/ChangeLog b/sci-chemistry/coot/ChangeLog index c4d7981..50444a3 100644 --- a/sci-chemistry/coot/ChangeLog +++ b/sci-chemistry/coot/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ =20 + 15 Jul 2011; Justin Lecher files/9999-mmdb-config.pa= tch: + Mmdb fix + 29 Jun 2011; Justin Lecher +files/9999-clipper-config.patch, +files/9999-mmdb-config.patch, coot-9999.ebuild, +files/9999-test.patch, metadata.xml: diff --git a/sci-chemistry/coot/files/9999-mmdb-config.patch b/sci-chemis= try/coot/files/9999-mmdb-config.patch index 1d7cbd4..b3b66ab 100644 --- a/sci-chemistry/coot/files/9999-mmdb-config.patch +++ b/sci-chemistry/coot/files/9999-mmdb-config.patch @@ -1,18 +1,18 @@ - macros/mmdb.m4 | 4 ++++ - 1 files changed, 4 insertions(+), 0 deletions(-) - -diff --git a/macros/mmdb.m4 b/macros/mmdb.m4 -index b477597..d05cf66 100644 ---- a/macros/mmdb.m4 -+++ b/macros/mmdb.m4 -@@ -86,6 +86,10 @@ else +Index: macros/mmdb.m4 +=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D +--- macros/mmdb.m4 (revision 3579) ++++ macros/mmdb.m4 (working copy) +@@ -86,8 +86,12 @@ ac_MMDB_LDOPTS=3D"-lmmdb -lm" fi =20 +-AC_MSG_CHECKING([for MMDB]) +PKG_CHECK_MODULES([MMDB],[mmdb >=3D 1.2]) +ac_MMDB_LDOPTS=3D"${MMDB_LIBS}" +ac_MMDB_CXXFLAGS=3D"${MMDB_CFLAGS}" -+ - AC_MSG_CHECKING([for MMDB]) =20 ++AC_MSG_CHECKING([for CISPEP in MMDB]) ++ LIBS=3D"$save_LIBS $ac_MMDB_LDOPTS" + CXXFLAGS=3D"$save_CXXFLAGS $ac_MMDB_CXXFLAGS" + #