From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1QwyqP-0006Kk-Ac for garchives@archives.gentoo.org; Fri, 26 Aug 2011 16:01:21 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 6CC0521C11A; Fri, 26 Aug 2011 16:01:04 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id 1FCB421C11A for ; Fri, 26 Aug 2011 16:01:04 +0000 (UTC) Received: from pelican.gentoo.org (unknown [66.219.59.40]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 7B4FC1B4036 for ; Fri, 26 Aug 2011 16:01:03 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by pelican.gentoo.org (Postfix) with ESMTP id C691C80042 for ; Fri, 26 Aug 2011 16:01:02 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: Subject: [gentoo-commits] proj/sci:master commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: c38f57d5a861d6665dad67b57f5004af962e67c2 Date: Fri, 26 Aug 2011 16:01:02 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: X-Archives-Hash: abdbd3047f37fac8ea12eb087c0b506a commit: c38f57d5a861d6665dad67b57f5004af962e67c2 Author: Justin Lecher gentoo org> AuthorDate: Fri Aug 26 15:49:14 2011 +0000 Commit: Justin Lecher gentoo org> CommitDate: Fri Aug 26 15:49:14 2011 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=3Dproj/sci.git;a=3Dc= ommit;h=3Dc38f57d5 Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci * 'master' of git+ssh://git.overlays.gentoo.org/proj/sci: (24 commits) [sci-chemistry/votca-csgapps] fixed a typo [sci-chemistry/votca-csg] changes due to 1.2.1 release sci-chemistry/votca-csg-apps -> sci-chemistry/votca-csgapps sci-chemistry/votca-csg-apps -> sci-chemistry/votca-csgapps sci-chemistry/votca-csg-apps -> sci-chemistry/votca-csgapps [virtual] Add ~amd64-linux keywords sci-physics/root: version bump [sci-visualization/paraview] Drop old, fix building with gcc-4.6, add m= issing dependency on PyQt4 adding old blas to properly mask mask blas-reference from tree fix manifest added num library docs added virtuals added gsl added mpiblacs added xblas added cblas-reference added mkl added lapacke added acml ... app-doc/blacs-docs/ChangeLog | 10 + app-doc/blacs-docs/Manifest | 4 + app-doc/blacs-docs/blacs-docs-1.1.ebuild | 18 + app-doc/blacs-docs/metadata.xml | 14 + app-doc/blas-docs/ChangeLog | 54 +++ app-doc/blas-docs/Manifest | 6 + app-doc/blas-docs/blas-docs-3.2.0.ebuild | 28 ++ app-doc/blas-docs/metadata.xml | 14 + app-doc/lapack-docs/ChangeLog | 74 ++++ app-doc/lapack-docs/Manifest | 5 + app-doc/lapack-docs/lapack-docs-3.2.0.ebuild | 30 ++ app-doc/lapack-docs/metadata.xml | 13 + app-doc/scalapack-docs/ChangeLog | 10 + app-doc/scalapack-docs/Manifest | 4 + app-doc/scalapack-docs/metadata.xml | 14 + app-doc/scalapack-docs/scalapack-docs-1.8.ebuild | 26 ++ dev-perl/Bio-SamTools/Bio-SamTools-1.29.ebuild | 30 -- dev-perl/Bio-SamTools/ChangeLog | 10 - dev-perl/Bio-SamTools/Manifest | 4 - dev-perl/Bio-SamTools/metadata.xml | 5 - eclass/alternatives-2.eclass | 2 +- media-gfx/librecad/Manifest | 1 - profiles/package.mask | 15 +- profiles/updates/3Q-2009 | 1 + sci-chemistry/votca-csg-apps/ChangeLog | 10 - sci-chemistry/votca-csg-apps/Manifest | 17 - .../votca-csg-apps/votca-csg-apps-9999.ebuild | 24 -- sci-chemistry/votca-csg/ChangeLog | 3 + sci-chemistry/votca-csg/Manifest | 18 +- sci-chemistry/votca-csg/votca-csg-9999.ebuild | 20 +- sci-chemistry/votca-csgapps/ChangeLog | 16 + sci-chemistry/votca-csgapps/Manifest | 17 + .../{votca-csg-apps =3D> votca-csgapps}/metadata.xml | 0 .../votca-csgapps/votca-csgapps-9999.ebuild | 30 ++ sci-libs/acml/ChangeLog | 224 ++++++++++++ sci-libs/acml/Manifest | 17 + sci-libs/acml/acml-4.4.0-r1.ebuild | 121 +++++++ sci-libs/acml/metadata.xml | 25 ++ sci-libs/blas-reference/Manifest | 7 + .../blas-reference-20070226-r1.ebuild | 70 ++++ .../blas-reference-20070226-r2.ebuild | 72 ++++ .../blas-reference/blas-reference-20070226.ebuild | 60 ++++ .../files/blas-reference-20070226-autotool.patch | 243 +++++++++++++ .../files/blas-reference-20070226-pkg-config.patch | 11 + .../blas-reference/files/eselect.blas.reference | 4 + sci-libs/cblas-reference/ChangeLog | 187 ++++++++++ sci-libs/cblas-reference/Manifest | 4 + .../cblas-reference-20110218.ebuild | 105 ++++++ sci-libs/cblas-reference/metadata.xml | 15 + sci-libs/fftw/ChangeLog | 6 + sci-libs/fftw/Manifest | 17 +- sci-libs/fftw/fftw-3.3.ebuild | 133 +++++++ sci-libs/fftw/fftw-3.3_alpha1.ebuild | 132 ------- sci-libs/fftw/files/fftw-3.2.1-as-needed.patch | 82 ----- sci-libs/gotoblas2/ChangeLog | 35 ++ sci-libs/gotoblas2/Manifest | 8 + .../gotoblas2/files/gotoblas2-1.13-aliasing.patch | 11 + .../gotoblas2/files/gotoblas2-1.13-dynamic.patch | 17 + .../gotoblas2/files/gotoblas2-1.13-fcheck.patch | 10 + .../files/gotoblas2-1.13-sharedlibs.patch} | 0 sci-libs/gotoblas2/gotoblas2-1.13.ebuild | 114 ++++++ sci-libs/gotoblas2/metadata.xml | 19 + sci-libs/gsl/ChangeLog | 374 ++++++++++++++= ++++++ sci-libs/gsl/Manifest | 5 + sci-libs/gsl/files/gsl-1.15-pkgconfig.patch | 16 + sci-libs/gsl/gsl-1.15-r1.ebuild | 42 +++ sci-libs/gsl/metadata.xml | 18 + sci-libs/lapacke-reference/._lapacke | Bin 0 -> 193 bytes sci-libs/lapacke-reference/ChangeLog | 18 + sci-libs/lapacke-reference/Manifest | 4 + .../lapacke-reference-1.0.0.009.ebuild | 84 +++++ sci-libs/lapacke-reference/metadata.xml | 10 + sci-libs/mkl/ChangeLog | 22 ++ sci-libs/mkl/Manifest | 6 + sci-libs/mkl/metadata.xml | 13 + sci-libs/mkl/mkl-10.3.4.191.ebuild | 136 +++++++ sci-libs/mpiblacs/ChangeLog | 21 ++ sci-libs/mpiblacs/Manifest | 6 + sci-libs/mpiblacs/metadata.xml | 12 + sci-libs/mpiblacs/mpiblacs-1.1.ebuild | 111 ++++++ sci-libs/scalapack/ChangeLog | 13 + sci-libs/scalapack/Manifest | 4 + sci-libs/scalapack/metadata.xml | 12 + sci-libs/scalapack/scalapack-1.8.0.ebuild | 103 ++++++ sci-libs/xblas/ChangeLog | 20 + sci-libs/xblas/Manifest | 4 + sci-libs/xblas/metadata.xml | 11 + sci-libs/xblas/xblas-1.0.248.ebuild | 78 ++++ sci-physics/root/ChangeLog | 6 + sci-physics/root/Manifest | 4 +- sci-physics/root/root-5.30.01.ebuild | 339 ++++++++++++++= ++++ sci-visualization/paraview/ChangeLog | 4 + sci-visualization/paraview/Manifest | 17 +- .../paraview/files/paraview-3.10.1-gcc46.patch | 20 + sci-visualization/paraview/paraview-3.10.1.ebuild | 17 +- sci-visualization/paraview/paraview-3.8.1.ebuild | 200 ----------- virtual/blacs/ChangeLog | 10 + virtual/blacs/Manifest | 23 ++ virtual/blacs/blacs-1.1.ebuild | 21 ++ virtual/blacs/metadata.xml | 8 + virtual/blas/ChangeLog | 19 + virtual/blas/Manifest | 23 ++ virtual/blas/blas-2.0.ebuild | 26 ++ virtual/blas/metadata.xml | 9 + virtual/cblas/ChangeLog | 32 ++ virtual/cblas/Manifest | 23 ++ virtual/cblas/cblas-2.0.ebuild | 24 ++ virtual/cblas/metadata.xml | 9 + virtual/lapack/ChangeLog | 27 ++ virtual/lapack/Manifest | 23 ++ virtual/lapack/lapack-3.3.ebuild | 23 ++ virtual/lapack/metadata.xml | 9 + virtual/lapacke/ChangeLog | 10 + virtual/lapacke/Manifest | 23 ++ virtual/lapacke/lapacke-1.0.ebuild | 20 + virtual/lapacke/metadata.xml | 9 + virtual/scalapack/ChangeLog | 10 + virtual/scalapack/Manifest | 23 ++ virtual/scalapack/metadata.xml | 8 + virtual/scalapack/scalapack-1.8.ebuild | 21 ++ 120 files changed, 3905 insertions(+), 574 deletions(-)