[gentoo-commits] proj/sci:master commit in: sci-biology/ssaha2-bin/

["Justin Lecher" <jlec@gentoo.org>]

commit:     b6d26e31654a901b96d326eaef0e3c991fd9aad8
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jun 25 13:03:01 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jun 25 13:03:01 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b6d26e31

Cleaned ebuild and fixed LICENSE

(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-biology/ssaha2-bin/ChangeLog               |    7 ++++
 sci-biology/ssaha2-bin/ssaha2-bin-2.5.3.ebuild |   41 +++++++++--------------
 2 files changed, 23 insertions(+), 25 deletions(-)

diff --git a/sci-biology/ssaha2-bin/ChangeLog b/sci-biology/ssaha2-bin/ChangeLog
new file mode 100644
index 0000000..914725e
--- /dev/null
+++ b/sci-biology/ssaha2-bin/ChangeLog
@@ -0,0 +1,7 @@
+# ChangeLog for sci-biology/ssaha2-bin
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+  25 Jun 2011; Justin Lecher <jlec@gentoo.org> ssaha2-bin-2.5.3.ebuild:
+  Cleaned ebuild and fixed LICENSE
+

diff --git a/sci-biology/ssaha2-bin/ssaha2-bin-2.5.3.ebuild b/sci-biology/ssaha2-bin/ssaha2-bin-2.5.3.ebuild
index eaf02be..34b63dd 100644
--- a/sci-biology/ssaha2-bin/ssaha2-bin-2.5.3.ebuild
+++ b/sci-biology/ssaha2-bin/ssaha2-bin-2.5.3.ebuild
@@ -1,43 +1,34 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=3
+EAPI=4
 
 inherit toolchain-funcs
 
 DESCRIPTION="SSAHA2: Sequence Search and Alignment by Hashing Algorithm"
 HOMEPAGE="http://www.sanger.ac.uk/resources/software/ssaha2"
-SRC_URI="x86? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_i686.tgz )
-		amd64? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_x86_64.tgz )
-		ia64? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_ia64.tgz )
-		ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/samflag.c
-		ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2-manual.pdf"
-
-LICENSE="GRL"
+SRC_URI="
+	x86? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_i686.tgz )
+	amd64? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_x86_64.tgz )
+	ia64? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2_ia64.tgz )
+	ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/samflag.c
+	ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2-manual.pdf"
+
+LICENSE="as-is"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""
 
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-if use x86; then
-	S="${WORKDIR}"/ssaha2_v"${PV}"_i686
-fi
-if use amd64; then
-	S="${WORKDIR}"/ssaha2_v"${PV}"_x86_64
-fi
-if use ia64; then
-	S="${WORKDIR}"/ssaha2_v"${PV}"_ia64
-fi
+use x86 && S="${WORKDIR}"/ssaha2_v"${PV}"_i686
+use amd64 && S="${WORKDIR}"/ssaha2_v"${PV}"_x86_64
+use ia64 && S="${WORKDIR}"/ssaha2_v"${PV}"_ia64
 
 src_compile() {
-	$(tc-getCC) ${CFLAGS} -o samflag "${DISTDIR}"/samflag.c || die "Failed to compile samflags"
+	$(tc-getCC) ${CFLAGS} ${LDFLAGS} -o samflag "${DISTDIR}"/samflag.c || die "Failed to compile samflags"
 }
 
 src_install() {
-	dobin samflag ssaha2 ssaha2Build ssahaSNP || die "dobin failed"
-	dodoc README || die "dodoc failed"
-	dodoc "${DISTDIR}"/ssaha2-manual.pdf || die "Failed to install ssaha2-manual.pdf"
+	dobin samflag ssaha2 ssaha2Build ssahaSNP
+	dodoc README "${DISTDIR}"/ssaha2-manual.pdf
 }