[gentoo-commits] proj/sci:master commit in: eclass/

["Justin Lecher" <jlec@gentoo.org>]

commit:     b47d033e03fbf2ab1245448221cb307f85e708d9
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 10 11:22:04 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Mar 10 11:22:04 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b47d033e

defualt for largefile support

---
 eclass/embassy-ng.eclass |  106 ++++++++++++++++++++++++++++++++++++++++++++++
 1 files changed, 106 insertions(+), 0 deletions(-)

diff --git a/eclass/embassy-ng.eclass b/eclass/embassy-ng.eclass
new file mode 100644
index 0000000..ad5e6ae
--- /dev/null
+++ b/eclass/embassy-ng.eclass
@@ -0,0 +1,106 @@
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/eclass/embassy.eclass,v 1.17 2008/11/03 22:17:50 ribosome Exp $
+
+# Creator of the original eclass
+# Author Olivier Fisette <ofisette@gmail.com>
+#
+# Author of the next generation eclass
+# Justin Lecher <jlec@gentoo.org>
+
+# @ECLASS: versionator.eclass
+# @MAINTAINER:
+# sci-biology@gentoo.org
+# jlec@gentoo.org
+# @BLURB: Use this to easy install EMBASSY programs (EMBOSS add-ons).
+# @DESCRIPTION: The inheriting ebuild should provide a "DESCRIPTION", "KEYWORDS"
+# and, if necessary, add "(R|P)DEPEND"encies. Additionnaly, the inheriting
+# ebuild's name must begin by "embassy-". Also, before inheriting, the ebuild
+# should specify what version of EMBOSS is required by setting EBOV.
+
+EAPI="4"
+
+inherit autotools eutils multilib
+
+DESCRIPTION="Based on the $ECLASS eclass"
+HOMEPAGE="http://emboss.sourceforge.net/"
+LICENSE="LGPL-2 GPL-2"
+
+SLOT="0"
+IUSE+=" doc minimal mysql pdf png postgres static-libs X"
+
+DEPEND="
+	dev-libs/expat
+	dev-libs/libpcre:3
+	sci-libs/plplot
+	sys-libs/zlib
+	mysql? ( dev-db/mysql )
+	pdf? ( media-libs/libharu )
+	png? (
+		sys-libs/zlib
+		media-libs/libpng
+		media-libs/gd
+		)
+	postgres? ( dev-db/postgresql-base )
+	X? ( x11-libs/libXt )"
+
+RDEPEND="${DEPEND}"
+
+if [[ ${PN} == "emboss" ]] ; then
+	DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package"
+	SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz"
+	[[ -n ${EBO_PATCH} ]] && SRC_URI+=" ftp://${PN}.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-${MY_PATCH}.gz -> ${P}.patch.gz"
+	IUSE+=" minimal"
+	RDEPEND+=" !sys-devel/cons"
+	PDEPEND="
+		!minimal? (
+				sci-biology/aaindex
+				sci-biology/cutg
+				sci-biology/prints
+				sci-biology/prosite
+				sci-biology/rebase
+				sci-biology/transfac
+				)"
+	S="${WORKDIR}/EMBOSS-${EBOV}"
+else
+	# The EMBASSY package name, retrieved from the inheriting ebuild's name
+	EN=${PN:8}
+	# The full name and version of the EMBASSY package (excluding the Gentoo
+	# revision number)
+	EF="$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV}"
+
+	DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
+	SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
+	DEPEND+=" =sci-biology/emboss-${EBOV}*[mysql=,pdf=,png=,postgres=,static-libs=,X=]"
+
+	S="${WORKDIR}"/${EF}
+fi
+
+embassy-ng_src_prepare() {
+	[[ -n ${EBO_PATCH} ]] && epatch "${WORKDIR}"/${P}.patch
+	[[ -f "${FILESDIR}"/${PF}.patch ]] && epatch "${FILESDIR}"/${PF}.patch
+	[[ -n ${NO_RECONF} ]] || eautoreconf
+}
+
+embassy-ng_src_configure() {
+	econf \
+		$(use_with X x) \
+		$(use_with png pngdriver "${EPREFIX}/usr") \
+		$(use_with doc docroot "${EPREFIX}/usr") \
+		$(use_with pdf hpdf "${EPREFIX}/usr") \
+		$(use_with mysql mysql "${EPREFIX}/usr/bin/mysql_config") \
+		$(use_with postgres postgresql "${EPREFIX}/usr/bin/pg_config") \
+		$(use_enable amd64 64) \
+		$(use_enable static-libs static) \
+		--enable-large
+		--without-java \
+		--enable-systemlibs \
+		${EBO_ECONF}
+}
+
+embassy-ng_src_install() {
+	emake DESTDIR="${D}" install
+	nonfatal dodoc AUTHORS ChangeLog FAQ NEWS README THANKS
+}
+
+EXPORT_FUNCTIONS src_prepare src_configure src_install