[gentoo-commits] gentoo-x86 commit in sci-chemistry/pymol: ChangeLog pymol-1.2.2-r3.ebuild

[gentoo-commits] gentoo-x86 commit in sci-chemistry/pymol: ChangeLog pymol-1.2.2-r3.ebuild

[Justin Lecher (jlec)]

jlec        10/02/18 13:23:49

  Modified:             ChangeLog
  Added:                pymol-1.2.2-r3.ebuild
  Log:
  Fixed usage of pathon eclass, EAPI=3 and PREFIX ready fixes, keyworded for amd64-linux & x86-linux
  (Portage version: 2.2_rc62/cvs/Linux i686)

Revision  Changes    Path
1.55                 sci-chemistry/pymol/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.55&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.55&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pymol/ChangeLog?r1=1.54&r2=1.55

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v
retrieving revision 1.54
retrieving revision 1.55
diff -u -r1.54 -r1.55
--- ChangeLog	10 Feb 2010 11:22:34 -0000	1.54
+++ ChangeLog	18 Feb 2010 13:23:48 -0000	1.55
@@ -1,6 +1,13 @@
 # ChangeLog for sci-chemistry/pymol
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.54 2010/02/10 11:22:34 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.55 2010/02/18 13:23:48 jlec Exp $
+
+*pymol-1.2.2-r3 (18 Feb 2010)
+
+  18 Feb 2010; Justin Lecher (jlec) <jlec@j-schmitz.net>
+  +files/1.2.2-prefix.patch, +pymol-1.2.2-r3.ebuild:
+  Fixed usage of pathon eclass, EAPI=3 and PREFIX ready fixes, keyworded for
+  amd64-linux & x86-linux
 
 *pymol-1.2.2-r2 (10 Feb 2010)
 



1.1                  sci-chemistry/pymol/pymol-1.2.2-r3.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pymol/pymol-1.2.2-r3.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/pymol/pymol-1.2.2-r3.ebuild?rev=1.1&content-type=text/plain

Index: pymol-1.2.2-r3.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.2.2-r3.ebuild,v 1.1 2010/02/18 13:23:48 jlec Exp $

EAPI="3"

PYTHON_USE_WITH="tk"
PYTHON_DEPEND="2:2.5"
PYTHON_MODNAME="chempy pmg_tk pymol"
REV="3859"

inherit eutils distutils prefix

DESCRIPTION="A Python-extensible molecular graphics system."
HOMEPAGE="http://pymol.sourceforge.net/"
SRC_URI="http://pymol.svn.sourceforge.net/viewvc/pymol/trunk/pymol.tar.gz?view=tar&pathrev=${REV} -> ${P}.tar.gz"

LICENSE="PSF-2.2"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="apbs numpy shaders vmd"

DEPEND="
		dev-python/numpy
		dev-python/pmw
		media-libs/freetype:2
		media-libs/libpng
		media-video/mpeg-tools
		sys-libs/zlib
		virtual/glut
		apbs? (
			dev-libs/maloc
			sci-chemistry/apbs
			sci-chemistry/pdb2pqr
			sci-chemistry/pymol-apbs-plugin
		)"
RDEPEND="${DEPEND}"

S="${WORKDIR}"/${PN}

pkg_setup() {
	python_set_active_version 2
}

src_prepare() {
	epatch "${FILESDIR}"/${PV}-data-path.patch

	epatch "${FILESDIR}"/${PV}-prefix.patch && \
	eprefixify setup.py

	# Turn off splash screen.  Please do make a project contribution
	# if you are able though. #299020
	epatch "${FILESDIR}"/1.2.1/nosplash-gentoo.patch

	# Respect CFLAGS
	sed -i \
		-e "s:\(ext_comp_args=\).*:\1[]:g" \
		"${S}"/setup.py || die "Failed running sed on setup.py"

	use shaders && epatch "${FILESDIR}"/${P}-shaders.patch

	use vmd && epatch "${FILESDIR}"/${P}-vmd.patch

	use numpy && \
		sed \
			-e '/PYMOL_NUMPY/s:^#::g' \
			-i setup.py
}

src_configure() {
	:
}

src_install() {
	distutils_src_install

	# These environment variables should not go in the wrapper script, or else
	# it will be impossible to use the PyMOL libraries from Python.
	cat >> "${T}"/20pymol <<- EOF
		PYMOL_PATH="${EPREFIX}/$(python_get_sitedir)/${PN}"
		PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
		PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
	EOF

	doenvd "${T}"/20pymol || die "Failed to install env.d file."

	cat >> "${T}"/pymol <<- EOF
	#!/bin/sh
	$(PYTHON -A -a) -O \${PYMOL_PATH}/__init__.py \$*
	EOF

	dobin "${T}"/pymol || die "Failed to install wrapper."

	insinto /usr/share/pymol
	doins -r test data scripts || die "no shared data"

	insinto /usr/share/pymol/examples
	doins -r examples || die "Failed to install docs."

	dodoc DEVELOPERS README || die "Failed to install docs."

	rm "${D}"$(python_get_sitedir)/pmg_tk/startup/apbs_tools.py
}