[gentoo-commits] gentoo-x86 commit in sci-biology/abyss: ChangeLog abyss-1.1.1.ebuild abyss-1.1.0.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/abyss: ChangeLog abyss-1.1.1.ebuild abyss-1.1.0.ebuild

[Andrey Kislyuk (weaver)]

weaver      10/01/26 20:54:12

  Modified:             ChangeLog
  Added:                abyss-1.1.1.ebuild
  Removed:              abyss-1.1.0.ebuild
  Log:
  Version bump
  (Portage version: 2.2_rc30/cvs/Linux x86_64)

Revision  Changes    Path
1.3                  sci-biology/abyss/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/ChangeLog?r1=1.2&r2=1.3

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- ChangeLog	4 Jan 2010 17:54:58 -0000	1.2
+++ ChangeLog	26 Jan 2010 20:54:11 -0000	1.3
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/abyss
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.2 2010/01/04 17:54:58 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.3 2010/01/26 20:54:11 weaver Exp $
+
+*abyss-1.1.1 (26 Jan 2010)
+
+  26 Jan 2010; Andrey Kislyuk <weaver@gentoo.org> -abyss-1.1.0.ebuild,
+  +abyss-1.1.1.ebuild:
+  Version bump
 
 *abyss-1.1.0 (04 Jan 2010)
 



1.1                  sci-biology/abyss/abyss-1.1.1.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/abyss-1.1.1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/abyss/abyss-1.1.1.ebuild?rev=1.1&content-type=text/plain

Index: abyss-1.1.1.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.1.1.ebuild,v 1.1 2010/01/26 20:54:11 weaver Exp $

EAPI="2"

DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler"
HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss"
SRC_URI="http://www.bcgsc.ca/downloads/abyss/${P}.tar.gz"

LICENSE="abyss"
SLOT="0"
IUSE="+mpi"
KEYWORDS="~amd64 ~x86"

DEPEND="dev-cpp/sparsehash
	mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"

# todo: --enable-maxk=N configure option
# todo: fix automagic mpi toggling

src_install() {
	einstall || die
}