* [gentoo-commits] gentoo-x86 commit in sci-biology/augustus/files: augustus-2.0.3-cflags.patch augustus-2.0.3-gcc4.3.patch
@ 2009-01-04 0:26 Andrey Kislyuk (weaver)
0 siblings, 0 replies; 2+ messages in thread
From: Andrey Kislyuk (weaver) @ 2009-01-04 0:26 UTC (permalink / raw
To: gentoo-commits
weaver 09/01/04 00:26:13
Added: augustus-2.0.3-cflags.patch
augustus-2.0.3-gcc4.3.patch
Log:
Initial commit
(Portage version: 2.2_rc12/cvs/Linux 2.6.26-tuxonice i686)
Revision Changes Path
1.1 sci-biology/augustus/files/augustus-2.0.3-cflags.patch
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/files/augustus-2.0.3-cflags.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/files/augustus-2.0.3-cflags.patch?rev=1.1&content-type=text/plain
Index: augustus-2.0.3-cflags.patch
===================================================================
diff -rc augustus.orig/src/Makefile augustus/src/Makefile
*** augustus.orig/src/Makefile 2009-01-03 18:26:17.000000000 -0500
--- augustus/src/Makefile 2009-01-03 18:38:35.000000000 -0500
***************
*** 3,9 ****
#
CC = g++
! CFLAGS = -Wall -ansi -pedantic -O2 -g -ggdb # -O2 -g -pg -ggdb -DDEBUG -static -DDEBUG -pg
INCLS = -I../include -I.
LIBS = # -lcwd
OBJS = genbank.o properties.o statemodel.o \
--- 3,9 ----
#
CC = g++
! CFLAGS := -Wall -ansi -pedantic -O2 -g -ggdb ${CFLAGS} # -O2 -g -pg -ggdb -DDEBUG -static -DDEBUG -pg
INCLS = -I../include -I.
LIBS = # -lcwd
OBJS = genbank.o properties.o statemodel.o \
1.1 sci-biology/augustus/files/augustus-2.0.3-gcc4.3.patch
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/files/augustus-2.0.3-gcc4.3.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/files/augustus-2.0.3-gcc4.3.patch?rev=1.1&content-type=text/plain
Index: augustus-2.0.3-gcc4.3.patch
===================================================================
diff -rc augustus.orig/include/help.hh augustus/include/help.hh
*** augustus.orig/include/help.hh 2009-01-03 18:26:17.000000000 -0500
--- augustus/include/help.hh 2009-01-03 18:36:30.000000000 -0500
***************
*** 23,28 ****
--- 23,29 ----
#include <cmath>
#include <cstring>
#include <cctype>
+ #include <stdlib.h>
#include "types.hh"
#include "projecterror.hh"
diff -rc augustus.orig/include/types.hh augustus/include/types.hh
*** augustus.orig/include/types.hh 2009-01-03 18:26:17.000000000 -0500
--- augustus/include/types.hh 2009-01-03 18:36:39.000000000 -0500
***************
*** 21,26 ****
--- 21,27 ----
#define _TYPES_HH
#include <string>
+ #include <limits.h>
#include "lldouble.hh"
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* [gentoo-commits] gentoo-x86 commit in sci-biology/augustus/files: augustus-2.0.3-cflags.patch augustus-2.0.3-gcc4.3.patch
@ 2009-03-19 15:15 Andrey Kislyuk (weaver)
0 siblings, 0 replies; 2+ messages in thread
From: Andrey Kislyuk (weaver) @ 2009-03-19 15:15 UTC (permalink / raw
To: gentoo-commits
weaver 09/03/19 15:15:49
Removed: augustus-2.0.3-cflags.patch
augustus-2.0.3-gcc4.3.patch
Log:
Version bump
(Portage version: 2.2_rc20/cvs/Linux 2.6.26-gentoo-r4 x86_64)
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