[gentoo-commits] gentoo-x86 commit in sci-biology/bioperl-run: ChangeLog bioperl-run-9999.ebuild bioperl-run-1.6.1.ebuild

["Andrey Kislyuk (weaver)" <weaver@gentoo.org>]

weaver      09/03/16 23:29:10

  Modified:             ChangeLog
  Added:                bioperl-run-9999.ebuild bioperl-run-1.6.1.ebuild
  Log:
  Version bump
  (Portage version: 2.2_rc20/cvs/Linux 2.6.26-gentoo-r4 x86_64)

Revision  Changes    Path
1.14                 sci-biology/bioperl-run/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/ChangeLog?rev=1.14&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/ChangeLog?rev=1.14&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/ChangeLog?r1=1.13&r2=1.14

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v
retrieving revision 1.13
retrieving revision 1.14
diff -u -r1.13 -r1.14
--- ChangeLog	22 Feb 2007 01:24:25 -0000	1.13
+++ ChangeLog	16 Mar 2009 23:29:10 -0000	1.14
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/bioperl-run
-# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.13 2007/02/22 01:24:25 jokey Exp $
+# Copyright 2000-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.14 2009/03/16 23:29:10 weaver Exp $
+
+*bioperl-run-9999 (16 Mar 2009)
+*bioperl-run-1.6.1 (16 Mar 2009)
+
+  16 Mar 2009; Andrey Kislyuk <weaver@gentoo.org> +bioperl-run-1.6.1.ebuild,
+  +bioperl-run-9999.ebuild:
+  Version bump
 
   22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog:
   Redigest for Manifest2



1.1                  sci-biology/bioperl-run/bioperl-run-9999.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999.ebuild?rev=1.1&content-type=text/plain

Index: bioperl-run-9999.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999.ebuild,v 1.1 2009/03/16 23:29:10 weaver Exp $

EAPI="2"

inherit perl-module subversion

DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinformatics applications"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI=""
ESVN_REPO_URI="svn://code.open-bio.org/bioperl/${PN}/trunk"

LICENSE="Artistic GPL-2"
SLOT="0"
KEYWORDS=""
IUSE="-minimal test"
SRC_TEST="do"

DEPEND="virtual/perl-Module-Build
	>=sci-biology/bioperl-${PV}
	!minimal? (
		dev-perl/Algorithm-Diff
		dev-perl/XML-Twig
		dev-perl/IO-String
		dev-perl/IPC-Run
	)"

RDEPEND="${DEPEND}"

S="${WORKDIR}/BioPerl-run-${PV}"

src_install() {
	mydoc="AUTHORS BUGS FAQ"
	perl-module_src_install
	# TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file)
	# with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D
	find "${D}" -name '*ConfigData*' -print -delete
}



1.1                  sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild?rev=1.1&content-type=text/plain

Index: bioperl-run-1.6.1.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild,v 1.1 2009/03/16 23:29:10 weaver Exp $

EAPI="2"

inherit perl-module

MY_PV="1.6.0"

DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinformatics applications"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI="http://bioperl.org/DIST/BioPerl-run-${PV}.tar.bz2"

LICENSE="Artistic GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="-minimal test"
SRC_TEST="do"

DEPEND="virtual/perl-Module-Build
	>=sci-biology/bioperl-${MY_PV}
	!minimal? (
		dev-perl/Algorithm-Diff
		dev-perl/XML-Twig
		dev-perl/IO-String
		dev-perl/IPC-Run
	)"

RDEPEND="${DEPEND}"

S="${WORKDIR}/BioPerl-run-${MY_PV}"

src_install() {
	mydoc="AUTHORS BUGS FAQ"
	perl-module_src_install
	# TODO: File collision in Bio/ConfigData.pm (a Module::Build internal file)
	# with sci-biology/bioperl. Workaround: the "nuke it from orbit" solution :D
	find "${D}" -name '*ConfigData*' -print -delete
}