[gentoo-commits] gentoo-x86 commit in sci-biology/augustus: metadata.xml ChangeLog Manifest augustus-2.0.3.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/augustus: metadata.xml ChangeLog Manifest augustus-2.0.3.ebuild

[Andrey Kislyuk (weaver)]

weaver      09/01/04 00:26:13

  Added:                metadata.xml ChangeLog Manifest
                        augustus-2.0.3.ebuild
  Log:
  Initial commit
  (Portage version: 2.2_rc12/cvs/Linux 2.6.26-tuxonice i686)

Revision  Changes    Path
1.1                  sci-biology/augustus/metadata.xml

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/metadata.xml?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/metadata.xml?rev=1.1&content-type=text/plain

Index: metadata.xml
===================================================================
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
	<maintainer>
		<email>weaver@gentoo.org</email>
		<name>Andrey Kislyuk</name>
	</maintainer>
	<herd>sci-biology</herd>
</pkgmetadata>



1.1                  sci-biology/augustus/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/ChangeLog?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/ChangeLog?rev=1.1&content-type=text/plain

Index: ChangeLog
===================================================================
# ChangeLog for sci-biology/augustus
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.1 2009/01/04 00:26:13 weaver Exp $

*augustus-2.0.3 (04 Jan 2009)

  04 Jan 2009; weaver <weaver@gentoo.org>
  +files/augustus-2.0.3-cflags.patch, +files/augustus-2.0.3-gcc4.3.patch,
  +metadata.xml, +augustus-2.0.3.ebuild:
  Initial commit, ebuild written by me




1.1                  sci-biology/augustus/Manifest

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/Manifest?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/Manifest?rev=1.1&content-type=text/plain

Index: Manifest
===================================================================
AUX augustus-2.0.3-cflags.patch 646 RMD160 a83852c8520ac12782dfe114fbd7618ce732bdc7 SHA1 1ee661682a11b99178ed77f1dec23b6241d2e8e7 SHA256 ef50cdbce090aa8404fd48ab98de2ab9bfe239bf352914bee3eceea3f466e87e
AUX augustus-2.0.3-gcc4.3.patch 726 RMD160 1d6df43e6dd96c365bd3a0ca17136b13d38a789e SHA1 42bb3c4f1d9dcb4ebf5bd1c4fc6f2464cd62230c SHA256 c548b0ed5d63c9e81e6ebf8dd799bdbccb5096350b0d6253129d0529fb55defa
DIST augustus.2.0.3.src.tar.gz 24488810 RMD160 6cb81134a6e554f3e9e436ebc8c9de0cc80e4d58 SHA1 c4039781493f2de6e507a6afb80b8393e60e8155 SHA256 b0964585247eae16752db17fc7d7b89667edb928dde53119ceb7dde265a696e5
EBUILD augustus-2.0.3.ebuild 820 RMD160 b47ea8b50b2714aaa8bb52c62e9e1be4093f260d SHA1 1096193234de274f707391c1dd1cbbfa9047cb8e SHA256 433dc92617865fa0c944911ca947644b322a7fc92fbe4e0c4eb3c209fc442753
MISC ChangeLog 349 RMD160 0f25882c0f8fc61e83e074a7f682df4b94995ada SHA1 d932ad9bdae0fd561d31f56f01d659a70bc922e0 SHA256 cc5b713e2d1a81e79676b512421991416767777b6b922f941c59ccfb28039dfc
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110



1.1                  sci-biology/augustus/augustus-2.0.3.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/augustus-2.0.3.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/augustus/augustus-2.0.3.ebuild?rev=1.1&content-type=text/plain

Index: augustus-2.0.3.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.0.3.ebuild,v 1.1 2009/01/04 00:26:13 weaver Exp $

inherit eutils

DESCRIPTION="Eukaryotic gene predictor"
HOMEPAGE="http://augustus.gobics.de/"
SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.src.tar.gz"

LICENSE="Artistic"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"

DEPEND=""
RDEPEND=""

S="${WORKDIR}/${PN}"

src_unpack() {
	unpack ${A}
	epatch "${FILESDIR}"/${P}-*.patch
}

src_compile() {
	emake -C src
}

src_install() {
	dobin src/{augustus,etraining}
	insinto /usr/share/${PN}
	doins -r config examples scripts
	echo "AUGUSTUS_CONFIG_PATH=\"/usr/share/${PN}/config\"" > "${S}/99${PN}"
	doenvd "${S}/99${PN}"
	dodoc README.TXT HISTORY.TXT
}