[gentoo-commits] gentoo-x86 commit in sci-chemistry/coot: ChangeLog coot-0.4_pre2-r549.ebuild

["Donnie Berkholz (dberkholz)" <dberkholz@gentoo.org>]

dberkholz    07/12/19 18:46:32

  Modified:             ChangeLog
  Added:                coot-0.4_pre2-r549.ebuild
  Log:
  Bump to 0.4 prerelease, unkeyworded. Use a package.keywords entry with '**' for the keyword to install.
  (Portage version: 2.1.4_rc9)

Revision  Changes    Path
1.15                 sci-chemistry/coot/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/coot/ChangeLog?rev=1.15&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/coot/ChangeLog?rev=1.15&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/coot/ChangeLog?r1=1.14&r2=1.15

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v
retrieving revision 1.14
retrieving revision 1.15
diff -u -r1.14 -r1.15
--- ChangeLog	16 Aug 2007 06:05:12 -0000	1.14
+++ ChangeLog	19 Dec 2007 18:46:31 -0000	1.15
@@ -1,6 +1,16 @@
 # ChangeLog for sci-chemistry/coot
 # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.14 2007/08/16 06:05:12 dberkholz Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.15 2007/12/19 18:46:31 dberkholz Exp $
+
+*coot-0.4_pre2-r549 (19 Dec 2007)
+
+  19 Dec 2007; Donnie Berkholz <dberkholz@gentoo.org>;
+  +files/0.4_pre2-as-needed.patch,
+  +files/0.4_pre2-link-against-guile-gtk-properly.patch,
+  +files/0.4_pre2-r549-fix-namespace-error.patch,
+  +coot-0.4_pre2-r549.ebuild:
+  Bump to 0.4 prerelease, unkeyworded. Use a package.keywords entry with '**'
+  for the keyword to install.
 
 *coot-0.3.3 (16 Aug 2007)
 



1.1                  sci-chemistry/coot/coot-0.4_pre2-r549.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/coot/coot-0.4_pre2-r549.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/coot/coot-0.4_pre2-r549.ebuild?rev=1.1&content-type=text/plain

Index: coot-0.4_pre2-r549.ebuild
===================================================================
# Copyright 1999-2007 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.4_pre2-r549.ebuild,v 1.1 2007/12/19 18:46:31 dberkholz Exp $

inherit autotools eutils

MY_S_PV=${PV/_pre/-pre-}-${PR/r/revision-}
MY_S_P=${PN}-${MY_S_PV}
MY_PV=${PV/_pre/-pre-}
MY_P=${PN}-${MY_PV}

DESCRIPTION="Crystallographic Object-Oriented Toolkit for model building, completion and validation"
HOMEPAGE="http://www.ysbl.york.ac.uk/~emsley/coot/"
if [[ ${MY_PV} = *pre* ]]; then
	SRC_URI="http://www.ysbl.york.ac.uk/~emsley/software/pre-release/${MY_S_P}.tar.gz"
else
	SRC_URI="http://www.ysbl.york.ac.uk/~emsley/software/${MY_P}.tar.gz"
fi
LICENSE="GPL-2"
SLOT="0"
KEYWORDS=""
IUSE=""
RDEPEND=">=sci-libs/gsl-1.3
	>=x11-libs/gtk+-2.2
	gnome-base/libgnomecanvas
	=x11-libs/guile-gtk-2*
	x11-libs/gtkglext
	virtual/glut
	virtual/opengl
	sci-chemistry/ccp4
	dev-lang/python
	dev-scheme/guile-gui
	dev-scheme/net-http
	dev-scheme/goosh
	dev-scheme/guile-www
	sci-libs/coot-data
	sci-chemistry/reduce
	sci-chemistry/probe
	>=sci-libs/clipper-20070907
	<sci-libs/mmdb-1.0.10"
# These are still required to run autoreconf
RDEPEND="${RDEPEND}
	=dev-libs/glib-1.2*
	=x11-libs/gtkglarea-1.2*"
DEPEND="${RDEPEND}
	dev-lang/swig"
S="${WORKDIR}/${MY_P}"

src_unpack() {
	unpack ${A}
	cd "${S}"

	epatch "${FILESDIR}"/${PV}-as-needed.patch
	epatch "${FILESDIR}"/${PV}-link-against-guile-gtk-properly.patch
	epatch "${FILESDIR}"/${PVR}-fix-namespace-error.patch

	# Link against single-precision fftw
	sed -i \
		-e "s:lfttw:lsfttw:g" \
		-e "s:lrfttw:lsrfttw:g" \
		"${S}"/macros/clipper.m4

	# Fix where it looks for some binaries
	sed -i \
		-e "s:/y/people/emsley/coot/Linux/bin/probe.2.11.050121.linux.RH9:/usr/bin/probe:g" \
		-e "s:/y/people/emsley/coot/Linux/bin/reduce.2.21.030604:/usr/bin/reduce:g" \
		"${S}"/scheme/group-settings.scm

	# Look for clipper slotted with '-2' suffix
	sed -i \
		-e "s~\(-lclipper[[:alnum:]-]*\)~\1-2~g" \
		"${S}"/macros/clipper.m4 \
		|| die "sed to find -2 slotted libraries failed"
	grep 'include.*clipper' -rl . \
		| xargs sed -i \
			-e "s~\(include.*clipper\)/~\1-2/~g" \
			|| die "sed to find -2 slotted headers failed"

	cd "${S}"
	AT_M4DIR="macros" eautoreconf
}

src_compile() {
	# All the --with's are used to activate various parts.
	# Yes, this is broken behavior.
	econf \
		--includedir='${prefix}/include/coot' \
		--with-gtkcanvas-prefix=/usr \
		--with-clipper-prefix=/usr \
		--with-mmdb-prefix=/usr \
		--with-ssmlib-prefix=/usr \
		--with-guile=/usr \
		--with-python=/usr \
		--with-guile-gtk \
		--with-gtk2 \
		|| die "econf failed"

	# Regenerate wrappers, otherwise at least gtk-2 build fails
	pushd src
	rm -f coot_wrap_python.cc coot_wrap_python_pre.cc \
		&& emake coot_wrap_python.cc \
		|| die "failed to regenerate python wrapper"

	rm -f coot_wrap_guile.cc coot_wrap_guile_pre.cc \
		&& emake coot_wrap_guile.cc \
		||die "failed to regenerate guile wrapper"
	popd

	# Parallel build's broken
	emake -j1 || die "emake failed"
}

src_install() {
	emake -j1 DESTDIR="${D}" install || die "install failed"

	# Install misses this
	insinto /usr/share/coot/python
	doins "${S}"/src/coot.py
}



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