[gentoo-commits] gentoo-x86 commit in sci-biology/seaview: ChangeLog seaview-2.2.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/seaview: ChangeLog seaview-2.2.ebuild

[Jeffrey Gardner (je_fro)]

je_fro      07/12/19 07:38:37

  Modified:             ChangeLog
  Added:                seaview-2.2.ebuild
  Log:
  Bumping to latest
  (Portage version: 2.1.4_rc10)

Revision  Changes    Path
1.16                 sci-biology/seaview/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/seaview/ChangeLog?rev=1.16&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/seaview/ChangeLog?rev=1.16&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/seaview/ChangeLog?r1=1.15&r2=1.16

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -r1.15 -r1.16
--- ChangeLog	22 Oct 2007 23:23:42 -0000	1.15
+++ ChangeLog	19 Dec 2007 07:38:37 -0000	1.16
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/seaview
 # Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.15 2007/10/22 23:23:42 je_fro Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.16 2007/12/19 07:38:37 je_fro Exp $
+
+*seaview-2.2 (19 Dec 2007)
+
+  19 Dec 2007; <jeff@gentoo.org> +seaview-2.2.ebuild:
+  Bump to latest version.
 
   22 Oct 2007; <jeff@gentoo.org> +files/seaview.desktop,
   seaview-20070919.ebuild:



1.1                  sci-biology/seaview/seaview-2.2.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/seaview/seaview-2.2.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/seaview/seaview-2.2.ebuild?rev=1.1&content-type=text/plain

Index: seaview-2.2.ebuild
===================================================================
# Copyright 1999-2007 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-2.2.ebuild,v 1.1 2007/12/19 07:38:37 je_fro Exp $

inherit toolchain-funcs multilib

DESCRIPTION="A graphical multiple sequence alignment editor"
HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"

MY_PF=${PF/-/_}
SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/${MY_PF}.tar.gz"

LICENSE="public-domain"

SLOT="0"
KEYWORDS="~x86 ~ppc ~amd64"
IUSE=""

DEPEND="x11-libs/fltk
	=media-libs/pdflib-6.0*
	sci-biology/clustalw"

S=${WORKDIR}

src_unpack() {
	unpack ${A}
	cd "${S}"

	# Respect CXXFLAGS. Package uses CFLAGS as CXXFLAGS.
	# Fix invocation of C++ compiler.
	# Fix include and library paths.
	sed -i \
		-e '/^FLTK/d' \
		-e '/^X11/d' \
		-e "s:^CXX.*:CXX = $(tc-getCXX):" \
		-e 's:-I$(FLTK):-I/usr/include/fltk-1.1:' \
		-e 's:-I$(X11)/include:-I/usr/include/X11R6:' \
		-e "s:\(^CFLAGS .*\):\1 ${CXXFLAGS}:" \
		-e "s:-L\$(FLTK)/lib:-L/usr/$(get_libdir)/fltk-1.1:" \
		-e "s:-L\$(X11)/lib:-L/usr/$(get_libdir)/X11:" \
		-e "s:^#HELP_NOT_IN_PATH:HELP_NOT_IN_PATH:" \
		-e "s:bge/mgouy:usr/share:" \
		Makefile || die "sed Makefile failed"
}

src_install() {
	dobin seaview seaview_align.sh
	insinto /usr/share/${PN}
	doins protein.mase seaview.help
}



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