* [gentoo-commits] proj/sci:master commit in: sci-biology/bamql/
@ 2018-05-01 5:55 99% Martin Mokrejs
0 siblings, 0 replies; 1+ results
From: Martin Mokrejs @ 2018-05-01 5:55 UTC (permalink / raw
To: gentoo-commits
commit: 35f7bda074493d740f250c2b434f66636082272d
Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue May 1 05:55:21 2018 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue May 1 05:55:21 2018 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=35f7bda0
sci-biology/bamql: add live ebuild
Package-Manager: Portage-2.3.31, Repoman-2.3.9
sci-biology/bamql/bamql-9999.ebuild | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/sci-biology/bamql/bamql-9999.ebuild b/sci-biology/bamql/bamql-9999.ebuild
new file mode 100644
index 000000000..44a7d85f5
--- /dev/null
+++ b/sci-biology/bamql/bamql-9999.ebuild
@@ -0,0 +1,28 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+inherit autotools git-r3
+
+DESCRIPTION="Extract reads from BAM files"
+HOMEPAGE="https://github.com/BoutrosLaboratory/bamql
+ https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1162-y"
+EGIT_REPO_URI="https://github.com/BoutrosLaboratory/bamql.git"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND="
+ sys-devel/llvm:=
+ sys-apps/util-linux
+ sci-libs/htslib
+ dev-libs/libpcre"
+RDEPEND="${DEPEND}"
+
+src_prepare(){
+ eautoreconf
+ default
+}
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