[gentoo-commits] proj/sci:master commit in: sci-biology/Gambit/

["Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>]

commit:     9f27b14c96909e5d20a115874ee3e5d93d536311
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri May  6 11:55:38 2011 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri May  6 11:55:38 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9f27b14c

sci-biology/Gambit: BAM file viewer

(Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit)

---
 sci-biology/Gambit/Gambit-0.4.145.ebuild |   35 ++++++++++++++++++++++++++++++
 sci-biology/Gambit/metadata.xml          |    9 +++++++
 2 files changed, 44 insertions(+), 0 deletions(-)

diff --git a/sci-biology/Gambit/Gambit-0.4.145.ebuild b/sci-biology/Gambit/Gambit-0.4.145.ebuild
new file mode 100644
index 0000000..ebc5f62
--- /dev/null
+++ b/sci-biology/Gambit/Gambit-0.4.145.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=3
+
+inherit qt4-r2
+
+DESCRIPTION="Display genomic alignments from BAM files with annotations from BED, GFF, GFF3, VCF formats"
+HOMEPAGE="http://code.google.com/p/gambit-viewer/"
+SRC_URI="http://gambit-viewer.googlecode.com/files/Gambit_v0.4.145_src.tar.gz
+	http://gambit-viewer.googlecode.com/files/GambitDocumentation_v0.4.145.pdf"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND="x11-libs/qt-core:4
+	x11-libs/qt-gui:4"
+RDEPEND="${DEPEND}
+	sci-biology/samtools"
+
+S="${WORKDIR}"/Gambit
+
+src_configure() {
+	lupdate ${PN}.pro || die
+	lrelease ${PN}.pro || die
+	eqmake4 ${PN}.pro || die
+}
+
+src_install() {
+	dobin ${PN} || die
+	dodoc "${DISTDIR}"/GambitDocumentation_v0.4.145.pdf
+}

diff --git a/sci-biology/Gambit/metadata.xml b/sci-biology/Gambit/metadata.xml
new file mode 100644
index 0000000..07b5255
--- /dev/null
+++ b/sci-biology/Gambit/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<herd>sci-biology</herd>
+	<maintainer>
+		<email>mmokrejs@fold.natur.cuni.cz</email>
+		<name>Martin Mokrejs</name>
+	</maintainer>
+</pkgmetadata>