* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-04-27 20:38 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-04-27 20:38 UTC (permalink / raw
To: gentoo-commits
commit: 82c0e236a4d76456086435fcf33eed2239ff72ac
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Wed Apr 27 20:37:59 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Wed Apr 27 20:37:59 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=82c0e236
bumped atlas
---
sci-libs/atlas/ChangeLog | 6 ++++++
sci-libs/atlas/Manifest | 6 +++---
.../{atlas-3.9.39.ebuild => atlas-3.9.40.ebuild} | 2 +-
3 files changed, 10 insertions(+), 4 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index 66f201c..a0692cf 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*atlas-3.9.40 (27 Apr 2011)
+
+ 27 Apr 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.39.ebuild,
+ +atlas-3.9.40.ebuild:
+ Bump
+
15 Apr 2011; Justin Lecher <jlec@gentoo.org> atlas-3.9.39.ebuild:
Correct syntax for cpufrq check being all CPUs under performance controll
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index ff83e1e..515ab10 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,9 +1,9 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90 SHA1 c7546210df4796457d9e96a00444adc4c0f2e77f SHA256 e537168f2022db98b9029c8064815b5581620c12d782016138b1bf0bbb01f473
-DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
+DIST atlas3.9.40.tar.bz2 5483901 RMD160 8cb7568a287f063c133a7272593706a38ef20648 SHA1 b7463a47bd5ea0a3da497a1bb1c37960d2002a1b SHA256 7cb889d17d20d2224b1c3a811306fe0060de2435b2527a79025396b260ec9fec
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.39.ebuild 5979 RMD160 caba82a1f3259acf11cab3380b0efcd04c2755c3 SHA1 df8d5999f89e492fc0462da867b50da69a726394 SHA256 c2e78d76e2498816fa940ff5655a28e240dfc9649b17abdc1be083ba99e87a3b
-MISC ChangeLog 795 RMD160 8d5ba909af2ad30226cc74243d68497841ee82e9 SHA1 81879222c36b0ad11c06fa51eada79606982a4e6 SHA256 7dac35dba3918fd328766170dcab030be67648abe1c32952ffd65a62994254bb
+EBUILD atlas-3.9.40.ebuild 5980 RMD160 07bcffe734a77fa77c919913a4f3fb316a6f03a1 SHA1 1e4bdf4de8efaa303851025845bf7e80074c0d39 SHA256 4af07f31c40b2b4cfc3a84e7c26a727d6e37c3860d84f5b67d278a6bba395531
+MISC ChangeLog 933 RMD160 2191f3230749b57509cbd157b8f979455b247a9d SHA1 84302b19a83b696ca715985901f6ba0bcde11ef2 SHA256 f604d3e15cfbc0fcab74a35f0941e6cf36241b275f256e6d53a9282f895b5c9b
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.40.ebuild
similarity index 99%
rename from sci-libs/atlas/atlas-3.9.39.ebuild
rename to sci-libs/atlas/atlas-3.9.40.ebuild
index 02feaa9..be179e9 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.40.ebuild
@@ -183,7 +183,7 @@ pkg_setup() {
}
src_prepare() {
- epatch "${FILESDIR}"/${PV}-bfr-overflow.patch
+ epatch "${FILESDIR}"/3.9.39-bfr-overflow.patch
}
src_configure() {
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-08-05 18:40 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-08-05 18:40 UTC (permalink / raw
To: gentoo-commits
commit: 934c3473ce0da4075dab229c27cdd70d05f5fa0e
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Fri Aug 5 18:39:52 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Fri Aug 5 18:39:52 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=934c3473
atlas-3.9.x now in sci overlay
---
sci-libs/atlas/Manifest | 2 -
sci-libs/atlas/atlas-3.9.46.ebuild | 266 ------------------------------------
2 files changed, 0 insertions(+), 268 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 4c28aec..eee6c02 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,8 +1,6 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
DIST atlas3.8.4.tar.bz2 2534071 RMD160 fa2828468459213fcf3f1ae4fd26671ba32f4776 SHA1 ef92bcbc4bec096b34ed7a0d29119d84c973df0c SHA256 0f7720fb16fa4b8b8a192ea791e57569546db6f5f016cf3caaee30a9d94583bf
-DIST atlas3.9.46.tar.bz2 5572227 RMD160 1fbe0f403fc8a35b2b355edabc756c65c19befa2 SHA1 aef8b696bc1bc50b304db953e2f20a653b783317 SHA256 a6667438a04e8a640e5cad75addc7678b19ae7f188c1ae7eb41069f84d43cd1a
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.4.ebuild 7382 RMD160 3d3dca9c817b42e4c8d6ec95f52dc0290340d0eb SHA1 c8ef9142745b320d2f7e2e7da35b25d00ec83d6b SHA256 2516f3ed8a750904fecf0a58ec9e91f63ec98bdb19a17f923908d935fe908720
-EBUILD atlas-3.9.46.ebuild 7335 RMD160 d3a23ef050d15f347c821b2da3f58ad52590ca05 SHA1 ce1413ffb59fe852bafdc7869d9ddf62d2f491fc SHA256 aad7a93c3664722ea4c0de27f0ff868ea0b3f51c5c5e087959531fe06ddd88db
MISC ChangeLog 1870 RMD160 9cf8d9bb466fef4e2a299fdbc3e0733bf79d9bfa SHA1 a9a8f2f12b153dc3faaef2563d5751306bcab441 SHA256 54a249ef95c2e0f7b987dd17fc9f2038e0baa36551566131d9197c60a9b98cc0
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.46.ebuild b/sci-libs/atlas/atlas-3.9.46.ebuild
deleted file mode 100644
index 1c988ac..0000000
--- a/sci-libs/atlas/atlas-3.9.46.ebuild
+++ /dev/null
@@ -1,266 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=4
-inherit eutils toolchain-funcs versionator alternatives-2
-
-LAPACKP=lapack-3.3.1
-
-DESCRIPTION="Automatically Tuned Linear Algebra Software"
-HOMEPAGE="http://math-atlas.sourceforge.net/"
-SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
- fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP}.tgz ) )"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 "
-IUSE="fortran doc lapack static-libs threads"
-
-RDEPEND="fortran? ( virtual/fortran )"
-DEPEND="${RDEPEND}
- !prefix? ( sys-power/cpufrequtils )"
-
-S="${WORKDIR}/ATLAS"
-
-atlas_configure() {
- local mycc="$(tc-getCC)"
- # http://sourceforge.net/tracker/?func=detail&aid=3301697&group_id=23725&atid=379483
- [[ ${mycc} == *gcc* ]] && mycc=gcc
- local myconf=(
- "--prefix=${ED}/usr"
- "--libdir=${ED}/usr/$(get_libdir)"
- "--incdir=${ED}/usr/include"
- "--cc=${mycc}"
- "-C ac ${mycc}"
- "-D c -DWALL"
- "-F ac '${CFLAGS}'"
- "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
- )
-
- # OpenMP shown to decreased performance over POSIX threads
- # (at least in 3.9.39, see atlas-dev mailing list)
- if use threads; then
- myconf+=( "-t -1" "-Si omp 0" )
- else
- myconf+=( "-t 0" "-Si omp 0" )
- fi
-
- if use amd64 || use ppc64 || use sparc; then
- if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
- myconf+=( "-b 64" )
- elif [ ${ABI} = x86 ] || [ ${ABI} = ppc ] || [ ${ABI} = sparc32 ] ; then
- myconf+=( "-b 32" )
- else
- myconf+=( "-b 64" )
- fi
- elif use ppc || use x86; then
- myconf+=( "-b 32" )
- elif use ia64; then
- myconf+=( "-b 64" )
- else #hppa alpha ...
- myconf+=( "" )
- fi
- if use fortran; then
- myconf+=(
- "-C if $(tc-getFC)"
- "-F if '${FFLAGS}'"
- )
- if use lapack; then
- myconf+=(
- "-Si latune 1"
- "--with-netlib-lapack-tarfile=${DISTDIR}/${LAPACKP}.tgz"
- )
- else
- myconf+=( "-Si latune 0" )
- fi
- else
- myconf+=( "-Si latune 0" "--nof77" )
- fi
- local confdir="${S}_${1}"; shift
- myconf+=( $@ )
- mkdir "${confdir}" && cd "${confdir}"
- "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
-}
-
-atlas_compile() {
- pushd "${S}_${1}" > /dev/null
- # atlas does its own parallel builds
- emake -j1 build
- cd lib
- emake libclapack.a
- [[ -e libptcblas.a ]] && emake libptclapack.a
- popd > /dev/null
-}
-
-# transform a static archive into a shared library and install them
-# atlas_install_libs <mylib.a> [extra link flags]
-atlas_install_libs() {
- local libname=$(basename ${1%.*})
- einfo "Installing ${libname}"
- local soname=${libname}.so.$(get_major_version)
- shift
- pushd "${S}_shared"/lib > /dev/null
- ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
- -Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
- "$@" -o ${soname} || die "Creating ${soname} failed"
- dolib.so ${soname}
- ln -s ${soname} ${soname%.*}
- dosym ${soname} /usr/$(get_libdir)/${soname%.*}
- popd > /dev/null
- use static-libs && dolib.a "${S}_static"/lib/${libname}.a
-}
-
-# create and install a pkgconfig file
-# atlas_install_pc <libname> <pkg name> [extra link flags]
-atlas_install_pc() {
- local libname=${1} ; shift
- local pcname=${1} ; shift
- cat <<-EOF > ${pcname}.pc
- prefix=${EPREFIX}/usr
- libdir=\${prefix}/$(get_libdir)
- includedir=\${prefix}/include
- Name: ${pcname}
- Description: ${PN} ${pcname}
- Version: ${PV}
- URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname} $@
- Cflags: -I\${includedir}/${PN}
- ${PCREQ}
- EOF
- insinto /usr/$(get_libdir)/pkgconfig
- doins ${pcname}.pc
-}
-
-pkg_setup() {
- if [[ -n $(type -P cpufreq-info) ]]; then
- [[ -z $(cpufreq-info -d) ]] && return
- local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
- local cpu=0
- while [[ ${cpu} -lt ${ncpu} ]]; do
- if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
- ewarn "CPU $cpu is not set to performance"
- ewarn "Run cpufreq-set -r -g performance as root"
- fi
- cpu=$(( cpu + 1 ))
- done
- else
- ewarn "Please make sure to disable CPU throttling completely"
- ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
- ewarn "generated timings will be completely random and the"
- ewarn "performance of the resulting libraries will be degraded"
- ewarn "considerably."
- fi
-}
-
-src_prepare() {
- epatch "${FILESDIR}"/3.9.39-bfr-overflow.patch
-}
-
-src_configure() {
- atlas_configure shared "-Fa alg -fPIC"
- use static-libs && atlas_configure static
-}
-
-src_compile() {
- atlas_compile shared
- use static-libs && atlas_compile static
-}
-
-src_test() {
- cd "${S}_shared"
- emake -j1 check
- emake -j1 time
-}
-
-src_install() {
- cd "${S}_shared/lib"
- # rename to avoid collision with other packages
- local l
- for l in {,c}{blas,lapack}; do
- if [[ -e lib${l}.a ]]; then
- mv lib{,atl}${l}.a
- use static-libs && mv "${S}"_static/lib/lib{,atl}${l}.a
- fi
- done
-
- [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
-
- # atlas
- atlas_install_libs libatlas.a -lm ${PTLIBS}
-
- # cblas
- atlas_install_libs libatlcblas.a -lm -L. -latlas
- atlas_install_pc atlcblas atlas-cblas -lm -latlas
- alternatives_for cblas atlas 0 \
- /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas.pc \
- /usr/include/cblas.h atlas/cblas.h
-
- # cblas threaded
- if [[ -e libptcblas.a ]]; then
- atlas_install_libs libptcblas.a -lm -L. -latlas ${PTLIBS}
- atlas_install_pc ptcblas atlas-cblas-threads -lm -latlas ${PTLIBS}
- alternatives_for cblas atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas-threads.pc \
- /usr/include/cblas.h atlas/cblas.h
- fi
-
- if use lapack; then
- PCREQ="Requires: cblas"
- # clapack
- atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
- atlas_install_pc atlclapack atlas-clapack -lm -latlas
-
- # clapack threaded
- if [[ -e libptclapack.a ]]; then
- atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas ${PTLIBS}
- atlas_install_pc ptclapack atlas-clapack-threads -lm -latlas ${PTLIBS}
- fi
- fi
-
- if use fortran; then
- LINK=$(tc-getF77) PCREQ=
- # blas
- atlas_install_libs libf77blas.a -lm -L. -latlas
- atlas_install_pc f77blas atlas-blas -lm -latlas
- alternatives_for blas atlas 0 \
- /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas.pc
-
- # blas threaded
- if [[ -e libptf77blas.a ]]; then
- atlas_install_libs libptf77blas.a -lm -L. -latlas ${PTLIBS}
- atlas_install_pc ptf77blas atlas-blas-threads -lm -latlas ${PTLIBS}
- alternatives_for blas atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas-threads.pc
- fi
-
- if use lapack; then
- PCREQ="Requires: blas cblas"
- # lapack
- atlas_install_libs libatllapack.a \
- -lm -L. -latlas -latlcblas -lf77blas
- atlas_install_pc atllapack atlas-lapack -lm -latlas
- alternatives_for lapack atlas 0 \
- /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack.pc
- # lapack threaded
- if [[ -e libptlapack.a ]]; then
- atlas_install_libs libptlapack.a \
- -lm -L. -latlas -lptcblas -lptf77blas ${PTLIBS}
- atlas_install_pc ptlapack atlas-lapack-threads \
- -lm -latlas ${PTLIBS}
- alternatives_for lapack atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack-threads.pc
- fi
- fi
- fi
-
- cd "${S}"
- insinto /usr/include/${PN}
- doins include/*.h
-
- cd "${S}/doc"
- dodoc INDEX.txt AtlasCredits.txt ChangeLog
- use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
- use doc && use fortran && dodoc f77blas*pdf
- use doc && use fortran && use lapack && dodoc lapack*pdf
-}
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-07-25 16:54 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-07-25 16:54 UTC (permalink / raw
To: gentoo-commits
commit: 7e609f5725b2f9e4e34e73cbba648362e83dd703
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Mon Jul 25 16:54:11 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon Jul 25 16:54:11 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=7e609f57
bump + removed die on cpu check
---
sci-libs/atlas/ChangeLog | 6 ++++++
sci-libs/atlas/Manifest | 8 ++++----
sci-libs/atlas/atlas-3.8.4.ebuild | 1 -
.../{atlas-3.9.41.ebuild => atlas-3.9.46.ebuild} | 1 -
4 files changed, 10 insertions(+), 6 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index 00e4d80..e17de12 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*atlas-3.9.46 (25 Jul 2011)
+
+ 25 Jul 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.41.ebuild,
+ +atlas-3.9.46.ebuild:
+ Version bump. Removed die for cpufreq (bug #375193).
+
*atlas-3.8.4 (23 May 2011)
23 May 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.8.3.ebuild,
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index c492fff..4c28aec 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,8 +1,8 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
DIST atlas3.8.4.tar.bz2 2534071 RMD160 fa2828468459213fcf3f1ae4fd26671ba32f4776 SHA1 ef92bcbc4bec096b34ed7a0d29119d84c973df0c SHA256 0f7720fb16fa4b8b8a192ea791e57569546db6f5f016cf3caaee30a9d94583bf
-DIST atlas3.9.41.tar.bz2 5498475 RMD160 d068b3cbc330aa2ad5f578dc2ae2d0cf86844155 SHA1 35424fda470feb78a29081c991eefa1276a5f52b SHA256 3fc1a4200ee953873747a7cb90b13532d1fb3f81a4cbb91c0e0fabb3eddb3bfc
+DIST atlas3.9.46.tar.bz2 5572227 RMD160 1fbe0f403fc8a35b2b355edabc756c65c19befa2 SHA1 aef8b696bc1bc50b304db953e2f20a653b783317 SHA256 a6667438a04e8a640e5cad75addc7678b19ae7f188c1ae7eb41069f84d43cd1a
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
-EBUILD atlas-3.8.4.ebuild 7431 RMD160 383e358040c54435ae80f0dfe749e398ba86bc5e SHA1 d7d13b5a511de22e645f0f4c6cb3354368123001 SHA256 9908b00fe60efe90eb9d7432b12543ff1a150b23fba8c10aaf31c51a375cee87
-EBUILD atlas-3.9.41.ebuild 7384 RMD160 58c03d677d13fba19893267ea007108b7a50d60c SHA1 3c519ff51d75cf4d401cb6ef003ab97bb14f7666 SHA256 ece0d09608c78c7b6cc51dc4f0c11ed21b96ed745c587080ad829e96879bceaa
-MISC ChangeLog 1684 RMD160 2840ad1a3e4eb9c47b39562e979dbc1319db132e SHA1 427d6b649b5fa8129f5419c47f702b20136633f3 SHA256 afa3f2debcfca046fcaf1ef5de84f13544370c960249003b9bac043879f9348b
+EBUILD atlas-3.8.4.ebuild 7382 RMD160 3d3dca9c817b42e4c8d6ec95f52dc0290340d0eb SHA1 c8ef9142745b320d2f7e2e7da35b25d00ec83d6b SHA256 2516f3ed8a750904fecf0a58ec9e91f63ec98bdb19a17f923908d935fe908720
+EBUILD atlas-3.9.46.ebuild 7335 RMD160 d3a23ef050d15f347c821b2da3f58ad52590ca05 SHA1 ce1413ffb59fe852bafdc7869d9ddf62d2f491fc SHA256 aad7a93c3664722ea4c0de27f0ff868ea0b3f51c5c5e087959531fe06ddd88db
+MISC ChangeLog 1870 RMD160 9cf8d9bb466fef4e2a299fdbc3e0733bf79d9bfa SHA1 a9a8f2f12b153dc3faaef2563d5751306bcab441 SHA256 54a249ef95c2e0f7b987dd17fc9f2038e0baa36551566131d9197c60a9b98cc0
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.8.4.ebuild b/sci-libs/atlas/atlas-3.8.4.ebuild
index 76e8fdd..8a54ce9 100644
--- a/sci-libs/atlas/atlas-3.8.4.ebuild
+++ b/sci-libs/atlas/atlas-3.8.4.ebuild
@@ -163,7 +163,6 @@ pkg_setup() {
if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
ewarn "CPU $cpu is not set to performance"
ewarn "Run cpufreq-set -r -g performance as root"
- die "${PN} needs all cpu set to performance"
fi
cpu=$(( cpu + 1 ))
done
diff --git a/sci-libs/atlas/atlas-3.9.41.ebuild b/sci-libs/atlas/atlas-3.9.46.ebuild
similarity index 99%
rename from sci-libs/atlas/atlas-3.9.41.ebuild
rename to sci-libs/atlas/atlas-3.9.46.ebuild
index 78104f3..1c988ac 100644
--- a/sci-libs/atlas/atlas-3.9.41.ebuild
+++ b/sci-libs/atlas/atlas-3.9.46.ebuild
@@ -141,7 +141,6 @@ pkg_setup() {
if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
ewarn "CPU $cpu is not set to performance"
ewarn "Run cpufreq-set -r -g performance as root"
- die "${PN} needs all cpu set to performance"
fi
cpu=$(( cpu + 1 ))
done
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-05-23 18:44 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-05-23 18:44 UTC (permalink / raw
To: gentoo-commits
commit: 4f752d4fe2bdd34a10f2ed85a8dbcc3dc6b3ad43
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Mon May 23 15:54:22 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon May 23 15:54:22 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=4f752d4f
gcc temporary hack to avoid undefined symbols
---
sci-libs/atlas/ChangeLog | 3 +++
sci-libs/atlas/atlas-3.9.41.ebuild | 7 +++++--
2 files changed, 8 insertions(+), 2 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index c1735c9..685e0d5 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 23 May 2011; Sébastien Fabbro <bicatali@gentoo.org> atlas-3.9.41.ebuild:
+ Forces gcc whenever a version of gcc is used, avoiding upstream bug
+
*atlas-3.9.41 (17 May 2011)
17 May 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.40-r1.ebuild,
diff --git a/sci-libs/atlas/atlas-3.9.41.ebuild b/sci-libs/atlas/atlas-3.9.41.ebuild
index d74ecb2..78104f3 100644
--- a/sci-libs/atlas/atlas-3.9.41.ebuild
+++ b/sci-libs/atlas/atlas-3.9.41.ebuild
@@ -24,12 +24,15 @@ DEPEND="${RDEPEND}
S="${WORKDIR}/ATLAS"
atlas_configure() {
+ local mycc="$(tc-getCC)"
+ # http://sourceforge.net/tracker/?func=detail&aid=3301697&group_id=23725&atid=379483
+ [[ ${mycc} == *gcc* ]] && mycc=gcc
local myconf=(
"--prefix=${ED}/usr"
"--libdir=${ED}/usr/$(get_libdir)"
"--incdir=${ED}/usr/include"
- "--cc=$(tc-getCC)"
- "-C ac $(tc-getCC)"
+ "--cc=${mycc}"
+ "-C ac ${mycc}"
"-D c -DWALL"
"-F ac '${CFLAGS}'"
"-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-05-23 18:44 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-05-23 18:44 UTC (permalink / raw
To: gentoo-commits
commit: 53fb259d4e6bee0b6caa430b1b696116a9c92c7a
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Mon May 23 17:56:13 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon May 23 17:56:13 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=53fb259d
bumped stable atlas
---
sci-libs/atlas/ChangeLog | 6 +
sci-libs/atlas/Manifest | 9 +-
sci-libs/atlas/atlas-3.8.3.ebuild | 224 -----------------------------
sci-libs/atlas/atlas-3.8.4.ebuild | 282 +++++++++++++++++++++++++++++++++++++
4 files changed, 292 insertions(+), 229 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index 685e0d5..00e4d80 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*atlas-3.8.4 (23 May 2011)
+
+ 23 May 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.8.3.ebuild,
+ +atlas-3.8.4.ebuild:
+ Version bump of the stable branch
+
23 May 2011; Sébastien Fabbro <bicatali@gentoo.org> atlas-3.9.41.ebuild:
Forces gcc whenever a version of gcc is used, avoiding upstream bug
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index b99b87c..c492fff 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,9 +1,8 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
-DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90 SHA1 c7546210df4796457d9e96a00444adc4c0f2e77f SHA256 e537168f2022db98b9029c8064815b5581620c12d782016138b1bf0bbb01f473
+DIST atlas3.8.4.tar.bz2 2534071 RMD160 fa2828468459213fcf3f1ae4fd26671ba32f4776 SHA1 ef92bcbc4bec096b34ed7a0d29119d84c973df0c SHA256 0f7720fb16fa4b8b8a192ea791e57569546db6f5f016cf3caaee30a9d94583bf
DIST atlas3.9.41.tar.bz2 5498475 RMD160 d068b3cbc330aa2ad5f578dc2ae2d0cf86844155 SHA1 35424fda470feb78a29081c991eefa1276a5f52b SHA256 3fc1a4200ee953873747a7cb90b13532d1fb3f81a4cbb91c0e0fabb3eddb3bfc
-DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
-EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.41.ebuild 7244 RMD160 bb812c1afdfb44626215699cdbde5c72576315b2 SHA1 2ddf511f633c64d534136d33782e15bd02e0252a SHA256 c15fe7534a3a7a48cb2f1f8208df074b1e32c3b1ef2beea43af0f355c594da7a
-MISC ChangeLog 1373 RMD160 2545605aee8386c6c6140d2c9424657301a9e52e SHA1 bf2da4db791f09b1d6e2e126e97306a09a29d84b SHA256 a525e0fc450241a5c2da322768776c2c21eb7a7870a3ed801e1e99cdaf88561f
+EBUILD atlas-3.8.4.ebuild 7431 RMD160 383e358040c54435ae80f0dfe749e398ba86bc5e SHA1 d7d13b5a511de22e645f0f4c6cb3354368123001 SHA256 9908b00fe60efe90eb9d7432b12543ff1a150b23fba8c10aaf31c51a375cee87
+EBUILD atlas-3.9.41.ebuild 7384 RMD160 58c03d677d13fba19893267ea007108b7a50d60c SHA1 3c519ff51d75cf4d401cb6ef003ab97bb14f7666 SHA256 ece0d09608c78c7b6cc51dc4f0c11ed21b96ed745c587080ad829e96879bceaa
+MISC ChangeLog 1684 RMD160 2840ad1a3e4eb9c47b39562e979dbc1319db132e SHA1 427d6b649b5fa8129f5419c47f702b20136633f3 SHA256 afa3f2debcfca046fcaf1ef5de84f13544370c960249003b9bac043879f9348b
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.8.3.ebuild b/sci-libs/atlas/atlas-3.8.3.ebuild
deleted file mode 100644
index 047a6d5..0000000
--- a/sci-libs/atlas/atlas-3.8.3.ebuild
+++ /dev/null
@@ -1,224 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=3
-inherit eutils toolchain-funcs multilib alternatives-2
-
-LAPACKP=lapack-3.3.0
-
-DESCRIPTION="Automatically Tuned Linear Algebra Software"
-HOMEPAGE="http://math-atlas.sourceforge.net/"
-SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
- fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP}.tgz ) )"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="fortran doc lapack static-libs xblas"
-
-RDEPEND="lapack? ( xblas? ( sci-libs/xblas ) )"
-DEPEND="${RDEPEND}"
-
-S="${WORKDIR}/ATLAS"
-
-pkg_setup() {
- if [[ -n $(type -P cpufreq-info) ]]; then
- [[ -z $(cpufreq-info -d) ]] && return
- local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
- local cpu=0
- while [[ ${cpu} -lt ${ncpu} ]]; do
- if "$(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance)"; then
- ewarn "CPU $cpu is not set to performance"
- ewarn "Run sudo cpufreq-set -g performance -c <CPU #> for all CPUs"
- die "${PN} needs all cpu set to performance"
- fi
- cpu=$(( cpu + 1 ))
- done
- else
- ewarn "Please make sure to disable CPU throttling completely"
- ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
- ewarn "generated timings will be completely random and the"
- ewarn "performance of the resulting libraries will be degraded"
- ewarn "considerably."
- fi
-}
-
-lapack_compile() {
- cd "${WORKDIR}/${LAPACKP}"
- local timer=INT_CPU_TIME
- case $(tc-getFC) in
- *gfortran|*g77) timer=INT_ETIME ;;
- *ifort) timer=EXT_ETIME ;;
- esac
- cat > make.inc <<-EOF
- FORTRAN = $(tc-getFC)
- OPTS = ${FFLAGS}
- NOOPT = -O0
- LOADER = $(tc-getFC)
- LOADEROPTS = ${LDFLAGS}
- ARCH = $(tc-getAR)
- ARCHFLAGS = cr
- RANLIB = $(tc-getRANLIB)
- TIMER = ${timer}
- $(use xblas && echo "USEXBLAS = Yes")
- EOF
- if use static-libs; then
- emake \
- LAPACKLIB=liblapack_nonpic.a \
- lapacklib || die "lapack static compilation failed"
- emake clean
- fi
- emake \
- LAPACKLIB=liblapack_pic.a \
- OPTS="${FFLAGS} -fPIC" \
- NOOPT="-O0 -fPIC" \
- lapacklib || die "lapack pic compilation failed"
-}
-
-src_configure() {
- # we need a pic static lapack lib before configuring
- use lapack && lapack_compile
- local myconf=(
- "--prefix=${ED}/usr"
- "--libdir=${ED}/usr/$(get_libdir)"
- "--incdir=${ED}/usr/include"
- "--cc=$(tc-getCC)"
- "-C ac $(tc-getCC)"
- "-D c -DWALL"
- "-F ac '${CFLAGS}'"
- "-Si cputhrchk 0"
- "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
- )
-
- if use amd64 || use ppc64 || use sparc; then
- if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
- myconf+=( "-b 64" )
- elif [ ${ABI} = x86 ] || [ ${ABI} = ppc ] || [ ${ABI} = sparc32 ] ; then
- myconf+=( "-b 32" )
- else
- myconf+=( "-b 64" )
- fi
- elif use ppc || use x86; then
- myconf+=( "-b 32" )
- elif use ia64; then
- myconf+=( "-b 64" )
- else #hppa alpha ...
- myconf+=( "" )
- fi
- if use fortran; then
- myconf+=(
- "-C if $(tc-getFC)"
- "-F if '${FFLAGS}'"
- )
- else
- myconf+=( "--nof77" )
- fi
-
- LAPACKLIB="${WORKDIR}/${LAPACKP}/liblapack"
- if use static-libs; then
- mkdir "${S}_build_static" && cd "${S}_build_static"
- "${S}"/configure \
- ${myconf[@]} \
- $(use lapack && echo "--with-netlib-lapack=${LAPACKLIB}_nonpic.a") \
- || die "configure static failed"
- fi
-
- mkdir "${S}_build_shared" && cd "${S}_build_shared"
- myconf+=( "-Fa alg -fPIC" )
- "${S}"/configure \
- ${myconf[@]} \
- $(use lapack && echo "--with-netlib-lapack=${LAPACKLIB}_pic.a") \
- || die "configure shared failed"
-}
-
-src_compile() {
- # atlas does its own parallel builds
- if use static-libs; then
- cd "${S}_build_static"
- emake -j1 build || die "emake static failed"
- fi
- cd "${S}_build_shared"
- emake -j1 build || die "emake static with PIC failed"
- cd lib
- local alibs="shared cshared"
- [[ -e libptcblas.a ]] && alibs="${alibs} ptshared ptcshared"
- emake ${alibs} || die "emake shared libs failed"
-}
-
-src_test() {
- cd "${S}_build_shared"
- emake -j1 check || die "emake check failed"
- emake -j1 time || die "emake time failed"
-}
-
-# atlas_install <blas|cblas|lapack> <lib>
-atlas_install() {
- local iname=${1} ilib=${2}
- if [[ ${iname} == ${ilib} ]]; then
- # rename to avoid conflict with linked configurations
- mv "${ED}"/usr/$(get_libdir)/lib{,a}${ilib}.so
- use static-libs && "${ED}"/usr/$(get_libdir)/lib{,a}${ilib}.a
- ilib=a${ilib}
- fi
- local prof=${PN}-${iname} ptlibs=
- if [[ ${ilib:0:2} == pt ]]; then
- prof=${prof}-threads
- ptlibs="-lthreads"
- fi
- cat <<-EOF > ${prof}.pc
- prefix=${EPREFIX}/usr
- libdir=\${prefix}/$(get_libdir)
- includedir=\${prefix}/include
- Name: ${prof}
- Description: ${DESCRIPTION} ${iname} implementation
- Version: ${PV}
- URL: ${HOMEPAGE}
- Libs: -L\${libdir} -latlas -l${ilib} ${ptlibs}
- Private: -lm
- Cflags: -I\${includedir}/${PN}
- $([[ ${1} == lapack ]] && echo "Requires: blas")
- EOF
- insinto /usr/$(get_libdir)/pkgconfig
- doins ${prof}.pc || die
- if [[ ${iname} == cblas ]]; then
- alternatives_for ${iname} ${prof} 0 \
- "/usr/$(get_libdir)/pkgconfig/${iname}.pc" "${prof}.pc" \
- "/usr/include/cblas.h" "${PN}/cblas.h"
- else
- alternatives_for ${iname} ${prof} 0 \
- "/usr/$(get_libdir)/pkgconfig/${iname}.pc" "${prof}.pc"
- fi
-}
-
-src_install() {
- # do a loop to make sure we install the same in shared/static
- local l
- for l in "${S}_build_shared"/lib/lib*.so; do
- dolib.so "${l}" || die
- if use static-libs; then
- dolib.a "${l/_shared/_static}".a || die
- fi
- done
- atlas_install cblas cblas
- if use fortran; then
- atlas_install blas f77blas
- use lapack && atlas_install lapack lapack
- fi
- if [[ -e "${S}_build_shared"/lib/libptcblas.so ]]; then
- atlas_install cblas ptcblas
- use fortran && atlas_install blas ptf77blas
- fi
- insinto /usr/include/${PN}
- doins include/*.h || die
- #dosym atlas/clapack.h /usr/include/clapack.h
-
- cd doc
- dodoc INDEX.txt AtlasCredits.txt ChangeLog
- if use doc; then
- insinto /usr/share/doc/${PF}
- doins atlas*pdf cblas.pdf cblasqref.pdf || die "doins docs failed"
- use fortran && doins f77blas*pdf
- use fortran && doins lapack*pdf
- fi
-}
diff --git a/sci-libs/atlas/atlas-3.8.4.ebuild b/sci-libs/atlas/atlas-3.8.4.ebuild
new file mode 100644
index 0000000..76e8fdd
--- /dev/null
+++ b/sci-libs/atlas/atlas-3.8.4.ebuild
@@ -0,0 +1,282 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=4
+inherit eutils toolchain-funcs versionator alternatives-2
+
+LAPACKP=lapack-3.3.1
+
+DESCRIPTION="Automatically Tuned Linear Algebra Software"
+HOMEPAGE="http://math-atlas.sourceforge.net/"
+SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
+ fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP}.tgz ) )"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 "
+IUSE="fortran doc lapack static-libs threads"
+
+RDEPEND="fortran? ( virtual/fortran )"
+DEPEND="${RDEPEND}
+ !prefix? ( sys-power/cpufrequtils )"
+
+S="${WORKDIR}/ATLAS"
+
+lapack_compile() {
+ cd "${WORKDIR}/${LAPACKP}"
+ local timer=INT_CPU_TIME
+ case $(tc-getFC) in
+ *gfortran|*g77) timer=INT_ETIME ;;
+ *ifort) timer=EXT_ETIME ;;
+ esac
+ cat > make.inc <<-EOF
+ FORTRAN = $(tc-getFC)
+ OPTS = ${FFLAGS}
+ NOOPT = -O0
+ LOADER = $(tc-getFC)
+ LOADEROPTS = ${LDFLAGS}
+ ARCH = $(tc-getAR)
+ ARCHFLAGS = cr
+ RANLIB = $(tc-getRANLIB)
+ TIMER = ${timer}
+ EOF
+ if use static-libs; then
+ emake \
+ LAPACKLIB=liblapack_nonpic.a \
+ lapacklib || die "lapack static compilation failed"
+ emake clean
+ fi
+ emake \
+ LAPACKLIB=liblapack_pic.a \
+ OPTS="${FFLAGS} -fPIC" \
+ NOOPT="-O0 -fPIC" \
+ lapacklib || die "lapack pic compilation failed"
+}
+
+atlas_configure() {
+ local mycc="$(tc-getCC)"
+ # http://sourceforge.net/tracker/?func=detail&aid=3301697&group_id=23725&atid=379483
+ [[ ${mycc} == *gcc* ]] && mycc=gcc
+ local myconf=(
+ "--prefix=${ED}/usr"
+ "--libdir=${ED}/usr/$(get_libdir)"
+ "--incdir=${ED}/usr/include"
+ "--cc=${mycc}"
+ "-C ac ${mycc}"
+ "-D c -DWALL"
+ "-F ac '${CFLAGS}'"
+ "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
+ )
+
+ if use threads; then
+ myconf+=( "-t -1" )
+ else
+ myconf+=( "-t 0" )
+ fi
+
+ if use amd64 || use ppc64 || use sparc; then
+ if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
+ myconf+=( "-b 64" )
+ elif [ ${ABI} = x86 ] || [ ${ABI} = ppc ] || [ ${ABI} = sparc32 ] ; then
+ myconf+=( "-b 32" )
+ else
+ myconf+=( "-b 64" )
+ fi
+ elif use ppc || use x86; then
+ myconf+=( "-b 32" )
+ elif use ia64; then
+ myconf+=( "-b 64" )
+ else #hppa alpha ...
+ myconf+=( "" )
+ fi
+ if use fortran; then
+ myconf+=(
+ "-Si nof77 0"
+ "-C if $(tc-getFC)"
+ "-F if '${FFLAGS}'"
+ )
+ use lapack && myconf+=( "--with-netlib-lapack=${LAPACKLIB}" )
+ else
+ myconf+=( "-Si nof77 1" )
+ fi
+ local confdir="${S}_${1}"; shift
+ myconf+=( $@ )
+ mkdir "${confdir}" && cd "${confdir}"
+ "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
+}
+
+atlas_compile() {
+ pushd "${S}_${1}" > /dev/null
+ # atlas does its own parallel builds
+ emake -j1 build
+ cd lib
+ emake libclapack.a
+ popd > /dev/null
+}
+
+# transform a static archive into a shared library and install them
+# atlas_install_libs <mylib.a> [extra link flags]
+atlas_install_libs() {
+ local libname=$(basename ${1%.*})
+ einfo "Installing ${libname}"
+ local soname=${libname}.so.$(get_major_version)
+ shift
+ pushd "${S}_shared"/lib > /dev/null
+ ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
+ -Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
+ "$@" -o ${soname} || die "Creating ${soname} failed"
+ dolib.so ${soname}
+ ln -s ${soname} ${soname%.*}
+ dosym ${soname} /usr/$(get_libdir)/${soname%.*}
+ popd > /dev/null
+ use static-libs && dolib.a "${S}_static"/lib/${libname}.a
+}
+
+# create and install a pkgconfig file
+# atlas_install_pc <libname> <pkg name> [extra link flags]
+atlas_install_pc() {
+ local libname=${1} ; shift
+ local pcname=${1} ; shift
+ cat <<-EOF > ${pcname}.pc
+ prefix=${EPREFIX}/usr
+ libdir=\${prefix}/$(get_libdir)
+ includedir=\${prefix}/include
+ Name: ${pcname}
+ Description: ${PN} ${pcname}
+ Version: ${PV}
+ URL: ${HOMEPAGE}
+ Libs: -L\${libdir} -l${libname} $@
+ Cflags: -I\${includedir}/${PN}
+ ${PCREQ}
+ EOF
+ insinto /usr/$(get_libdir)/pkgconfig
+ doins ${pcname}.pc
+}
+
+pkg_setup() {
+ if [[ -n $(type -P cpufreq-info) ]]; then
+ [[ -z $(cpufreq-info -d) ]] && return
+ local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
+ local cpu=0
+ while [[ ${cpu} -lt ${ncpu} ]]; do
+ if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
+ ewarn "CPU $cpu is not set to performance"
+ ewarn "Run cpufreq-set -r -g performance as root"
+ die "${PN} needs all cpu set to performance"
+ fi
+ cpu=$(( cpu + 1 ))
+ done
+ else
+ ewarn "Please make sure to disable CPU throttling completely"
+ ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
+ ewarn "generated timings will be completely random and the"
+ ewarn "performance of the resulting libraries will be degraded"
+ ewarn "considerably."
+ fi
+}
+
+src_prepare() {
+ epatch "${FILESDIR}"/3.9.39-bfr-overflow.patch
+}
+
+src_configure() {
+ if use fortran && use lapack; then
+ lapack_compile
+ LAPACKLIB="${WORKDIR}/${LAPACKP}/liblapack_pic.a"
+ fi
+ atlas_configure shared "-Fa alg -fPIC"
+ if use static-libs; then
+ use fortran && use lapack && \
+ LAPACKLIB="${WORKDIR}/${LAPACKP}/liblapack_nonpic.a"
+ atlas_configure static
+ fi
+}
+
+src_compile() {
+ atlas_compile shared
+ use static-libs && atlas_compile static
+}
+
+src_test() {
+ cd "${S}_shared"
+ emake -j1 check
+ emake -j1 time
+}
+
+src_install() {
+ cd "${S}_shared/lib"
+ # rename to avoid collision with other packages
+ local l
+ for l in {,c}{blas,lapack}; do
+ if [[ -e lib${l}.a ]]; then
+ mv lib{,atl}${l}.a
+ use static-libs && mv "${S}"_static/lib/lib{,atl}${l}.a
+ fi
+ done
+
+ [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
+
+ # atlas
+ atlas_install_libs libatlas.a -lm ${PTLIBS}
+
+ # cblas
+ atlas_install_libs libatlcblas.a -lm -L. -latlas
+ atlas_install_pc atlcblas atlas-cblas -lm -latlas
+ alternatives_for cblas atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas.pc \
+ /usr/include/cblas.h atlas/cblas.h
+
+ # cblas threaded
+ if [[ -e libptcblas.a ]]; then
+ atlas_install_libs libptcblas.a -lm -L. -latlas ${PTLIBS}
+ atlas_install_pc ptcblas atlas-cblas-threads -lm -latlas ${PTLIBS}
+ alternatives_for cblas atlas-threads 0 \
+ /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas-threads.pc \
+ /usr/include/cblas.h atlas/cblas.h
+ fi
+
+ if use lapack; then
+ PCREQ="Requires: cblas"
+ # clapack
+ atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
+ atlas_install_pc atlclapack atlas-clapack -lm -latlas
+ fi
+
+ if use fortran; then
+ LINK=$(tc-getF77) PCREQ=
+ # blas
+ atlas_install_libs libf77blas.a -lm -L. -latlas
+ atlas_install_pc f77blas atlas-blas -lm -latlas
+ alternatives_for blas atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas.pc
+
+ # blas threaded
+ if [[ -e libptf77blas.a ]]; then
+ atlas_install_libs libptf77blas.a -lm -L. -latlas ${PTLIBS}
+ atlas_install_pc ptf77blas atlas-blas-threads -lm -latlas ${PTLIBS}
+ alternatives_for blas atlas-threads 0 \
+ /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas-threads.pc
+ fi
+
+ if use lapack; then
+ PCREQ="Requires: blas cblas"
+ # lapack
+ atlas_install_libs libatllapack.a \
+ -lm -L. -latlas -latlcblas -lf77blas
+ atlas_install_pc atllapack atlas-lapack -lm -latlas
+ alternatives_for lapack atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack.pc
+ fi
+ fi
+
+ cd "${S}"
+ insinto /usr/include/${PN}
+ doins include/*.h
+
+ cd "${S}/doc"
+ dodoc INDEX.txt AtlasCredits.txt ChangeLog
+ use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
+ use doc && use fortran && dodoc f77blas*pdf
+ use doc && use fortran && use lapack && dodoc lapack*pdf
+}
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-05-17 17:16 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-05-17 17:16 UTC (permalink / raw
To: gentoo-commits
commit: c9efd67dac8ad551c6472ffb111f3b73f1fdc7f0
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Tue May 17 17:06:26 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Tue May 17 17:06:26 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=c9efd67d
atlas version bump
---
sci-libs/atlas/ChangeLog | 6 ++++++
sci-libs/atlas/Manifest | 6 +++---
...{atlas-3.9.40-r1.ebuild => atlas-3.9.41.ebuild} | 16 ++++++----------
3 files changed, 15 insertions(+), 13 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index 44edf90..c1735c9 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*atlas-3.9.41 (17 May 2011)
+
+ 17 May 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.40-r1.ebuild,
+ +atlas-3.9.41.ebuild:
+ Version bump. Removed archdef 0 causing undefined symbols
+
*atlas-3.9.40-r1 (29 Apr 2011)
29 Apr 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.40.ebuild,
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 8806550..b99b87c 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,9 +1,9 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90 SHA1 c7546210df4796457d9e96a00444adc4c0f2e77f SHA256 e537168f2022db98b9029c8064815b5581620c12d782016138b1bf0bbb01f473
-DIST atlas3.9.40.tar.bz2 5483901 RMD160 8cb7568a287f063c133a7272593706a38ef20648 SHA1 b7463a47bd5ea0a3da497a1bb1c37960d2002a1b SHA256 7cb889d17d20d2224b1c3a811306fe0060de2435b2527a79025396b260ec9fec
+DIST atlas3.9.41.tar.bz2 5498475 RMD160 d068b3cbc330aa2ad5f578dc2ae2d0cf86844155 SHA1 35424fda470feb78a29081c991eefa1276a5f52b SHA256 3fc1a4200ee953873747a7cb90b13532d1fb3f81a4cbb91c0e0fabb3eddb3bfc
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.40-r1.ebuild 7301 RMD160 f0621c5a638c91a65399b5afe2644a4ea4b5e409 SHA1 43c672c9f78942f1846b18df9a8e19b06a40cbde SHA256 a9ade6ae82d343716b94f73cf84fff3a8e91aa72663427e741dd867189acd774
-MISC ChangeLog 1179 RMD160 bd748f26de8ce3a28b374f008f24c24fecab200f SHA1 6ea21403379496bde2477272992dca40facba1c0 SHA256 a404d161ebfce79c60171fe6cfc1016c1d51a90b631b40521e9aab8bf5b51353
+EBUILD atlas-3.9.41.ebuild 7244 RMD160 bb812c1afdfb44626215699cdbde5c72576315b2 SHA1 2ddf511f633c64d534136d33782e15bd02e0252a SHA256 c15fe7534a3a7a48cb2f1f8208df074b1e32c3b1ef2beea43af0f355c594da7a
+MISC ChangeLog 1373 RMD160 2545605aee8386c6c6140d2c9424657301a9e52e SHA1 bf2da4db791f09b1d6e2e126e97306a09a29d84b SHA256 a525e0fc450241a5c2da322768776c2c21eb7a7870a3ed801e1e99cdaf88561f
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.40-r1.ebuild b/sci-libs/atlas/atlas-3.9.41.ebuild
similarity index 95%
rename from sci-libs/atlas/atlas-3.9.40-r1.ebuild
rename to sci-libs/atlas/atlas-3.9.41.ebuild
index a06bdfe..d74ecb2 100644
--- a/sci-libs/atlas/atlas-3.9.40-r1.ebuild
+++ b/sci-libs/atlas/atlas-3.9.41.ebuild
@@ -3,7 +3,7 @@
# $Header: $
EAPI=4
-inherit eutils toolchain-funcs multilib versionator alternatives-2
+inherit eutils toolchain-funcs versionator alternatives-2
LAPACKP=lapack-3.3.1
@@ -32,7 +32,6 @@ atlas_configure() {
"-C ac $(tc-getCC)"
"-D c -DWALL"
"-F ac '${CFLAGS}'"
- "-Si cputhrchk 0"
"-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
)
@@ -73,10 +72,7 @@ atlas_configure() {
myconf+=( "-Si latune 0" )
fi
else
- myconf+=(
- "-Si latune 0"
- "--nof77"
- )
+ myconf+=( "-Si latune 0" "--nof77" )
fi
local confdir="${S}_${1}"; shift
myconf+=( $@ )
@@ -179,10 +175,10 @@ src_install() {
cd "${S}_shared/lib"
# rename to avoid collision with other packages
local l
- for l in lib{,c}blas.a lib{,c}lapack.a ; do
- if [[ -e ${l} ]]; then
- mv ${l} ${l/lib/libatl}
- use static-libs && mv "${S}"_static/lib/{${l},${l/lib/libatl}}
+ for l in {,c}{blas,lapack}; do
+ if [[ -e lib${l}.a ]]; then
+ mv lib{,atl}${l}.a
+ use static-libs && mv "${S}"_static/lib/lib{,atl}${l}.a
fi
done
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-04-29 17:28 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-04-29 17:28 UTC (permalink / raw
To: gentoo-commits
commit: 6be2e51b0f56b23d29915960592b80a47bcd3fa3
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Fri Apr 29 17:28:05 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Fri Apr 29 17:28:05 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=6be2e51b
cleaned pkg-config files
---
sci-libs/atlas/Manifest | 2 +-
sci-libs/atlas/atlas-3.9.40-r1.ebuild | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index bdd2049..33449f5 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -4,6 +4,6 @@ DIST atlas3.9.40.tar.bz2 5483901 RMD160 8cb7568a287f063c133a7272593706a38ef20648
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.40-r1.ebuild 7282 RMD160 3f9462c3b30be41e1737d0d87093dbb4410ba300 SHA1 01e4e5a2e101576fd6c1ee83f15d488ce5975948 SHA256 0619a7228d59941e98a284ca8a2514a9640e31bd6c78fb9f0cdd86e8a16662a6
+EBUILD atlas-3.9.40-r1.ebuild 7287 RMD160 4ae056ecad1b7f4bd82f33a3b82d90bdee5069f2 SHA1 b1136d3fb273dae4459b5bfa49b4607e82d47141 SHA256 caf4b6143fcd6a3249f428ae6379c5390345d731d74fe1f8ac9e0e2a1e6627c5
MISC ChangeLog 1179 RMD160 bd748f26de8ce3a28b374f008f24c24fecab200f SHA1 6ea21403379496bde2477272992dca40facba1c0 SHA256 a404d161ebfce79c60171fe6cfc1016c1d51a90b631b40521e9aab8bf5b51353
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.40-r1.ebuild b/sci-libs/atlas/atlas-3.9.40-r1.ebuild
index d39ec99..a756e53 100644
--- a/sci-libs/atlas/atlas-3.9.40-r1.ebuild
+++ b/sci-libs/atlas/atlas-3.9.40-r1.ebuild
@@ -125,7 +125,7 @@ atlas_install_pc() {
Description: ${PN} ${pcname}
Version: ${PV}
URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname} "$@"
+ Libs: -L\${libdir} -l${libname} $@
Cflags: -I\${includedir}/${PN}
${PCREQ}
EOF
@@ -221,7 +221,7 @@ src_install() {
fi
if use fortran; then
- LINK=$(tc-getF77)
+ LINK=$(tc-getF77) PCREQ=
# blas
atlas_install_libs libf77blas.a -lm -L. -latlas
atlas_install_pc f77blas atlas-blas -lm -latlas
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-04-29 17:12 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-04-29 17:12 UTC (permalink / raw
To: gentoo-commits
commit: 05457c4257a0d3e82ad18c72b0efd94b8506d72e
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Fri Apr 29 17:12:18 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Fri Apr 29 17:12:18 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=05457c42
atlas revbump for linking
---
sci-libs/atlas/ChangeLog | 7 +
sci-libs/atlas/Manifest | 4 +-
...{atlas-3.9.40.ebuild => atlas-3.9.40-r1.ebuild} | 147 +++++++++++++-------
3 files changed, 105 insertions(+), 53 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index a0692cf..44edf90 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -2,6 +2,13 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*atlas-3.9.40-r1 (29 Apr 2011)
+
+ 29 Apr 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.40.ebuild,
+ +atlas-3.9.40-r1.ebuild:
+ Reworked entirely linking procedure: now explicitely treat each module blas,
+ cblas and lapack separately
+
*atlas-3.9.40 (27 Apr 2011)
27 Apr 2011; Sébastien Fabbro <bicatali@gentoo.org> -atlas-3.9.39.ebuild,
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 515ab10..bdd2049 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -4,6 +4,6 @@ DIST atlas3.9.40.tar.bz2 5483901 RMD160 8cb7568a287f063c133a7272593706a38ef20648
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.40.ebuild 5980 RMD160 07bcffe734a77fa77c919913a4f3fb316a6f03a1 SHA1 1e4bdf4de8efaa303851025845bf7e80074c0d39 SHA256 4af07f31c40b2b4cfc3a84e7c26a727d6e37c3860d84f5b67d278a6bba395531
-MISC ChangeLog 933 RMD160 2191f3230749b57509cbd157b8f979455b247a9d SHA1 84302b19a83b696ca715985901f6ba0bcde11ef2 SHA256 f604d3e15cfbc0fcab74a35f0941e6cf36241b275f256e6d53a9282f895b5c9b
+EBUILD atlas-3.9.40-r1.ebuild 7282 RMD160 3f9462c3b30be41e1737d0d87093dbb4410ba300 SHA1 01e4e5a2e101576fd6c1ee83f15d488ce5975948 SHA256 0619a7228d59941e98a284ca8a2514a9640e31bd6c78fb9f0cdd86e8a16662a6
+MISC ChangeLog 1179 RMD160 bd748f26de8ce3a28b374f008f24c24fecab200f SHA1 6ea21403379496bde2477272992dca40facba1c0 SHA256 a404d161ebfce79c60171fe6cfc1016c1d51a90b631b40521e9aab8bf5b51353
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.40.ebuild b/sci-libs/atlas/atlas-3.9.40-r1.ebuild
similarity index 58%
rename from sci-libs/atlas/atlas-3.9.40.ebuild
rename to sci-libs/atlas/atlas-3.9.40-r1.ebuild
index be179e9..d39ec99 100644
--- a/sci-libs/atlas/atlas-3.9.40.ebuild
+++ b/sci-libs/atlas/atlas-3.9.40-r1.ebuild
@@ -15,7 +15,7 @@ SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE="fortran doc lapack openmp static-libs threads"
+IUSE="fortran doc lapack static-libs threads"
RDEPEND="fortran? ( virtual/fortran )"
DEPEND="${RDEPEND}
@@ -39,11 +39,9 @@ atlas_configure() {
# OpenMP shown to decreased performance over POSIX threads
# (at least in 3.9.39, see atlas-dev mailing list)
if use threads; then
- myconf+=( "-t -1" )
- elif use openmp; then
- myconf+=( "-Si omp 2" )
+ myconf+=( "-t -1" "-Si omp 0" )
else
- myconf+=( "-t 0" "-Si omp 0" )
+ myconf+=( "-t 0" "-Si omp 0" )
fi
if use amd64 || use ppc64 || use sparc; then
@@ -97,67 +95,42 @@ atlas_compile() {
}
# transform a static archive into a shared library and install them
-# atlas_install_libs <mylib.a> linking libraries
+# atlas_install_libs <mylib.a> [extra link flags]
atlas_install_libs() {
local libname=$(basename ${1%.*})
einfo "Installing ${libname}"
local soname=${libname}.so.$(get_major_version)
shift
pushd "${S}_shared"/lib > /dev/null
- $(tc-getCC) ${LDFLAGS} -shared -Wl,-soname=${soname} \
+ ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
-Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
"$@" -o ${soname} || die "Creating ${soname} failed"
dolib.so ${soname}
+ ln -s ${soname} ${soname%.*}
dosym ${soname} /usr/$(get_libdir)/${soname%.*}
popd > /dev/null
use static-libs && dolib.a "${S}_static"/lib/${libname}.a
}
-# atlas_install_profile <lib>
-atlas_install_profile() {
- local libname=$(basename ${1%.*})
- local modname=$(echo ${libname} | sed -r -e 's/lib(pt|f77|ptf77|)//')
- local profname=${PN}-${modname}
- [[ ${libname} =~ pt ]] && profname=${profname}-threads
- # avoid conflict with other implementations
- if [[ ${libname} == lib${modname} ]]; then
- mv ${libname}.a ${libname/lib/libatl}.a
- libname=${libname/lib/libatl}
- fi
- atlas_install_libs ${libname} -L. -latlas ${PTLIBS}
- cat <<-EOF > ${profname}.pc
+# create and install a pkgconfig file
+# atlas_install_pc <libname> <pkg name> [extra link flags]
+atlas_install_pc() {
+ local libname=${1} ; shift
+ local pcname=${1} ; shift
+ cat <<-EOF > ${pcname}.pc
prefix=${EPREFIX}/usr
libdir=\${prefix}/$(get_libdir)
includedir=\${prefix}/include
- Name: ${profname}
- Description: ${PN} ${profname}
+ Name: ${pcname}
+ Description: ${PN} ${pcname}
Version: ${PV}
URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname#lib} -latlas ${PTLIBS}
- Private: -lm
+ Libs: -L\${libdir} -l${libname} "$@"
+ Cflags: -I\${includedir}/${PN}
+ ${PCREQ}
EOF
-
- if [[ ${modname} == clapack ]]; then
- echo "Cflags: -I\${includedir}/${PN}" >> ${profname}.pc
- echo "Requires: cblas" >> ${profname}.pc
- elif [[ ${modname} == cblas ]]; then
- echo "Cflags: -I\${includedir}/${PN}" >> ${profname}.pc
- elif [[ ${modname} == lapack ]]; then
- echo "Requires: cblas blas" >> ${profname}.pc
- fi
-
insinto /usr/$(get_libdir)/pkgconfig
- doins ${profname}.pc
- [[ ${modname} == clapack ]] && return
-
- if [[ ${modname} == cblas ]]; then
- alternatives_for ${modname} ${profname} 0 \
- /usr/$(get_libdir)/pkgconfig/${modname}.pc ${profname}.pc \
- /usr/include/cblas.h ${PN}/cblas.h
- else
- alternatives_for ${modname} ${profname} 0 \
- /usr/$(get_libdir)/pkgconfig/${modname}.pc ${profname}.pc
- fi
+ doins ${pcname}.pc
}
pkg_setup() {
@@ -198,19 +171,91 @@ src_compile() {
src_test() {
cd "${S}_shared"
- emake -j1 check || die "emake check failed"
- emake -j1 time || die "emake time failed"
+ emake -j1 check
+ emake -j1 time
}
src_install() {
cd "${S}_shared/lib"
- [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
- atlas_install_libs libatlas.a -lm ${PTLIBS}
+ # rename to avoid collision with other packages
local l
- for l in lib*{blas,lapack}.a; do
- atlas_install_profile ${l}
+ for l in lib{,c}blas.a lib{,c}lapack.a ; do
+ if [[ -e ${l} ]]; then
+ mv ${l} ${l/lib/libatl}
+ use static-libs && mv "${S}"_static/lib/{${l},${l/lib/libatl}}
+ fi
done
+ [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
+
+ # atlas
+ atlas_install_libs libatlas.a -lm ${PTLIBS}
+
+ # cblas
+ atlas_install_libs libatlcblas.a -lm -L. -latlas
+ atlas_install_pc atlcblas atlas-cblas -lm -latlas
+ alternatives_for cblas atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas.pc \
+ /usr/include/cblas.h atlas/cblas.h
+
+ # cblas threaded
+ if [[ -e libptcblas.a ]]; then
+ atlas_install_libs libptcblas.a -lm -L. -latlas ${PTLIBS}
+ atlas_install_pc ptcblas atlas-cblas-threads -lm -latlas ${PTLIBS}
+ alternatives_for cblas atlas-threads 0 \
+ /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas-threads.pc \
+ /usr/include/cblas.h atlas/cblas.h
+ fi
+
+ if use lapack; then
+ PCREQ="Requires: cblas"
+ # clapack
+ atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
+ atlas_install_pc atlclapack atlas-clapack -lm -latlas
+
+ # clapack threaded
+ if [[ -e libptclapack.a ]]; then
+ atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas ${PTLIBS}
+ atlas_install_pc ptclapack atlas-clapack-threads -lm -latlas ${PTLIBS}
+ fi
+ fi
+
+ if use fortran; then
+ LINK=$(tc-getF77)
+ # blas
+ atlas_install_libs libf77blas.a -lm -L. -latlas
+ atlas_install_pc f77blas atlas-blas -lm -latlas
+ alternatives_for blas atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas.pc
+
+ # blas threaded
+ if [[ -e libptf77blas.a ]]; then
+ atlas_install_libs libptf77blas.a -lm -L. -latlas ${PTLIBS}
+ atlas_install_pc ptf77blas atlas-blas-threads -lm -latlas ${PTLIBS}
+ alternatives_for blas atlas-threads 0 \
+ /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas-threads.pc
+ fi
+
+ if use lapack; then
+ PCREQ="Requires: blas cblas"
+ # lapack
+ atlas_install_libs libatllapack.a \
+ -lm -L. -latlas -latlcblas -lf77blas
+ atlas_install_pc atllapack atlas-lapack -lm -latlas
+ alternatives_for lapack atlas 0 \
+ /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack.pc
+ # lapack threaded
+ if [[ -e libptlapack.a ]]; then
+ atlas_install_libs libptlapack.a \
+ -lm -L. -latlas -lptcblas -lptf77blas ${PTLIBS}
+ atlas_install_pc ptlapack atlas-lapack-threads \
+ -lm -latlas ${PTLIBS}
+ alternatives_for lapack atlas-threads 0 \
+ /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack-threads.pc
+ fi
+ fi
+ fi
+
cd "${S}"
insinto /usr/include/${PN}
doins include/*.h
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-03-24 21:57 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-03-24 21:57 UTC (permalink / raw
To: gentoo-commits
commit: cf8577d7399fddc84eb2f9edecf78a666a2c838a
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 24 21:57:02 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Thu Mar 24 21:57:02 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=cf8577d7
remove extra lib in pkg-config linking
---
sci-libs/atlas/Manifest | 2 +-
sci-libs/atlas/atlas-3.9.39.ebuild | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index f76ea0b..cfceed8 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -2,6 +2,6 @@ DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90
DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.39.ebuild 5875 RMD160 1903e0330eeab81b0ac3795e1bc42e3448d37b90 SHA1 9226bcf5b5053a7f3f8c7349e2c7cc2392ed03d8 SHA256 c12b5c962dc7f3baa0dee452e27ba45313bff0f1df2fc1a8444b50f1693cf52d
+EBUILD atlas-3.9.39.ebuild 5879 RMD160 702b18e5546453b51ce7155dc1fb145c60b29a92 SHA1 000fcea4b916cf09e8d7c6a042af3843ab70af97 SHA256 b78b9706318fb7ad30828b37c07ad697a8ce3e1be929f3d0c72268b74ac27908
MISC ChangeLog 621 RMD160 755eab85fb123a94aa51ad5cd331f2a51191f1d0 SHA1 123bb45ac67e3048c72d06505fc665923cabce03 SHA256 0baa2873a98dc52777c96696648f06ad7b51473fa08b6fa0ca03964ab54af3b7
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.39.ebuild
index e58c435..ff66b88 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.39.ebuild
@@ -132,7 +132,7 @@ atlas_install_profile() {
Description: ${PN} ${profname}
Version: ${PV}
URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname} -latlas ${PTLIBS}
+ Libs: -L\${libdir} -l${libname#lib} -latlas ${PTLIBS}
Private: -lm
EOF
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-03-24 19:12 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-03-24 19:12 UTC (permalink / raw
To: gentoo-commits
commit: d29fa3ae3938881b80189385e8177206d71e40ed
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 24 19:11:50 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Thu Mar 24 19:11:50 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=d29fa3ae
removed include from blas and lapack profiles. cleaning.
---
sci-libs/atlas/Manifest | 2 +-
sci-libs/atlas/atlas-3.9.39.ebuild | 17 ++++++++++-------
2 files changed, 11 insertions(+), 8 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index d7e1935..f76ea0b 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -2,6 +2,6 @@ DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90
DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.39.ebuild 5623 RMD160 205da9970ab07f0a01faf9055cc796bbc3c05e31 SHA1 fc6c8a28f73fd761094ffdaae6b9fcd87c488271 SHA256 eda4ca0c4fc10fb0cc2601fa0f93e2f3a79d1c1275695232751b59dbf2f64abf
+EBUILD atlas-3.9.39.ebuild 5875 RMD160 1903e0330eeab81b0ac3795e1bc42e3448d37b90 SHA1 9226bcf5b5053a7f3f8c7349e2c7cc2392ed03d8 SHA256 c12b5c962dc7f3baa0dee452e27ba45313bff0f1df2fc1a8444b50f1693cf52d
MISC ChangeLog 621 RMD160 755eab85fb123a94aa51ad5cd331f2a51191f1d0 SHA1 123bb45ac67e3048c72d06505fc665923cabce03 SHA256 0baa2873a98dc52777c96696648f06ad7b51473fa08b6fa0ca03964ab54af3b7
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.39.ebuild
index 5088452..e58c435 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.39.ebuild
@@ -95,6 +95,8 @@ atlas_compile() {
popd > /dev/null
}
+# transform a static archive into a shared library and install them
+# atlas_install_libs <mylib.a> linking libraries
atlas_install_libs() {
local libname=$(basename ${1%.*})
einfo "Installing ${libname}"
@@ -110,7 +112,7 @@ atlas_install_libs() {
use static-libs && dolib.a "${S}_static"/lib/${libname}.a
}
-# atlas_install_lib <lib>
+# atlas_install_profile <lib>
atlas_install_profile() {
local libname=$(basename ${1%.*})
local modname=$(echo ${libname} | sed -r -e 's/lib(pt|f77|ptf77|)//')
@@ -121,7 +123,7 @@ atlas_install_profile() {
mv ${libname}.a ${libname/lib/libatl}.a
libname=${libname/lib/libatl}
fi
- atlas_install_libs ${libname} -L. -latlas ${libs}
+ atlas_install_libs ${libname} -L. -latlas ${PTLIBS}
cat <<-EOF > ${profname}.pc
prefix=${EPREFIX}/usr
libdir=\${prefix}/$(get_libdir)
@@ -130,13 +132,15 @@ atlas_install_profile() {
Description: ${PN} ${profname}
Version: ${PV}
URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname} ${LIBS}
+ Libs: -L\${libdir} -l${libname} -latlas ${PTLIBS}
Private: -lm
- Cflags: -I\${includedir}/${PN}
EOF
if [[ ${modname} == clapack ]]; then
+ echo "Cflags: -I\${includedir}/${PN}" >> ${profname}.pc
echo "Requires: cblas" >> ${profname}.pc
+ elif [[ ${modname} == cblas ]]; then
+ echo "Cflags: -I\${includedir}/${PN}" >> ${profname}.pc
elif [[ ${modname} == lapack ]]; then
echo "Requires: cblas blas" >> ${profname}.pc
fi
@@ -195,9 +199,8 @@ src_test() {
src_install() {
cd "${S}_shared/lib"
- LIBS=-lm
- [[ -e libptcblas.a ]] && LIBS="${libs} -lpthread"
- atlas_install_libs libatlas.a
+ [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
+ atlas_install_libs libatlas.a -lm ${PTLIBS}
local l
for l in lib*{blas,lapack}.a; do
atlas_install_profile ${l}
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-03-22 16:46 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-03-22 16:46 UTC (permalink / raw
To: gentoo-commits
commit: dc22f7c5cb79af17afcf3cdeb72925d85717e7ce
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Tue Mar 22 16:46:17 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Tue Mar 22 16:46:17 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=dc22f7c5
more shared library fix
---
sci-libs/atlas/Manifest | 2 +-
sci-libs/atlas/atlas-3.9.39.ebuild | 3 +--
2 files changed, 2 insertions(+), 3 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 7096c8c..d7e1935 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -2,6 +2,6 @@ DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90
DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.39.ebuild 5650 RMD160 a52f86adea6577378591ed5b6f7f568e20705c23 SHA1 7dc8469871446b7ebe2ddb51e5f0e90323ee6ebe SHA256 5c486119893975227609ff8b56370d08a547dc5f38ff2831910061cdc4cdf8d2
+EBUILD atlas-3.9.39.ebuild 5623 RMD160 205da9970ab07f0a01faf9055cc796bbc3c05e31 SHA1 fc6c8a28f73fd761094ffdaae6b9fcd87c488271 SHA256 eda4ca0c4fc10fb0cc2601fa0f93e2f3a79d1c1275695232751b59dbf2f64abf
MISC ChangeLog 621 RMD160 755eab85fb123a94aa51ad5cd331f2a51191f1d0 SHA1 123bb45ac67e3048c72d06505fc665923cabce03 SHA256 0baa2873a98dc52777c96696648f06ad7b51473fa08b6fa0ca03964ab54af3b7
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.39.ebuild
index 1d142cb..5088452 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.39.ebuild
@@ -101,8 +101,7 @@ atlas_install_libs() {
local soname=${libname}.so.$(get_major_version)
shift
pushd "${S}_shared"/lib > /dev/null
- $(tc-getCC) ${LDFLAGS} -Wl,-soname=${soname} \
- -shared -Wl,-soname=${soname} \
+ $(tc-getCC) ${LDFLAGS} -shared -Wl,-soname=${soname} \
-Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
"$@" -o ${soname} || die "Creating ${soname} failed"
dolib.so ${soname}
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-03-22 4:10 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-03-22 4:10 UTC (permalink / raw
To: gentoo-commits
commit: 1f00099ed40695d8995e98d79e44b081cf69a49f
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Tue Mar 22 04:09:08 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Tue Mar 22 04:09:08 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=1f00099e
fixed collision for cblas and lapack modules
---
sci-libs/atlas/Manifest | 2 +-
sci-libs/atlas/atlas-3.9.39.ebuild | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index a117b0c..7096c8c 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -2,6 +2,6 @@ DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90
DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.39.ebuild 5649 RMD160 dbb82c3751348e40af78177c8cf88cf01fc14a8c SHA1 11d5799aab4bfbe60791dcfb7c8e5147b9b0aa43 SHA256 3d9f47d6559038b18cef20ca685db84289e706e1408a852dfa1902a4d71dd5a1
+EBUILD atlas-3.9.39.ebuild 5650 RMD160 a52f86adea6577378591ed5b6f7f568e20705c23 SHA1 7dc8469871446b7ebe2ddb51e5f0e90323ee6ebe SHA256 5c486119893975227609ff8b56370d08a547dc5f38ff2831910061cdc4cdf8d2
MISC ChangeLog 621 RMD160 755eab85fb123a94aa51ad5cd331f2a51191f1d0 SHA1 123bb45ac67e3048c72d06505fc665923cabce03 SHA256 0baa2873a98dc52777c96696648f06ad7b51473fa08b6fa0ca03964ab54af3b7
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.39.ebuild
index 6fddc3e..1d142cb 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.39.ebuild
@@ -114,7 +114,7 @@ atlas_install_libs() {
# atlas_install_lib <lib>
atlas_install_profile() {
local libname=$(basename ${1%.*})
- local modname=$(echo ${libname} | sed -r -e 's/lib(pt|f77|ptf77)//')
+ local modname=$(echo ${libname} | sed -r -e 's/lib(pt|f77|ptf77|)//')
local profname=${PN}-${modname}
[[ ${libname} =~ pt ]] && profname=${profname}-threads
# avoid conflict with other implementations
^ permalink raw reply related [flat|nested] 13+ messages in thread* [gentoo-commits] dev/bicatali:master commit in: sci-libs/atlas/
@ 2011-03-21 23:03 Sebastien Fabbro
0 siblings, 0 replies; 13+ messages in thread
From: Sebastien Fabbro @ 2011-03-21 23:03 UTC (permalink / raw
To: gentoo-commits
commit: df50a7934ec314c24002161b15b8997174425894
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Mon Mar 21 23:02:42 2011 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon Mar 21 23:02:42 2011 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=dev/bicatali.git;a=commit;h=df50a793
atlas bump
---
sci-libs/atlas/ChangeLog | 6 +-
sci-libs/atlas/Manifest | 6 +-
sci-libs/atlas/atlas-3.9.39.ebuild | 236 ++++++++++++++++++------------------
3 files changed, 128 insertions(+), 120 deletions(-)
diff --git a/sci-libs/atlas/ChangeLog b/sci-libs/atlas/ChangeLog
index 2b114f0..d8f7da4 100644
--- a/sci-libs/atlas/ChangeLog
+++ b/sci-libs/atlas/ChangeLog
@@ -1,7 +1,11 @@
# ChangeLog for sci-libs/atlas
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 21 Mar 2011; Sébastien Fabbro <bicatali@gentoo.org> atlas-3.9.39.ebuild:
+ Version bump. Seriously refactored the ebuild. Now choose posix threads over
+ openmp when the two are enabled
+
*atlas-3.9.32 (05 Dec 2010)
05 Dec 2010; Sébastien Fabbro <bicatali@gentoo.org> atlas-3.8.3.ebuild,
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index f88ae73..a117b0c 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,7 +1,7 @@
DIST atlas3.8.3.tar.bz2 2527756 RMD160 0425e630d9d0c5b7aae81427a41b7eaa18447e90 SHA1 c7546210df4796457d9e96a00444adc4c0f2e77f SHA256 e537168f2022db98b9029c8064815b5581620c12d782016138b1bf0bbb01f473
-DIST atlas3.9.37.tar.bz2 5449672 RMD160 87bb689e7a956df74ea4091552ac3cfd30430093 SHA1 71dd254dad1fc9ad3dec123a561706c9a1a5d7d1 SHA256 9f4380dfd5b024a52f5c8419d487c85b1c160eb06ac702a3c52350ef18e29cff
+DIST atlas3.9.39.tar.bz2 5493831 RMD160 118ad28a6dab1633b55a4654a2b67688177dedb7 SHA1 025a62a6577035552cb48aeb45bb4270c3d66580 SHA256 ddb3804d3b2dada955f3b07f8c3b26aff274aaaa2de2211a15309aa892bc5c83
DIST lapack-3.3.0.tgz 6064824 RMD160 cc72e7c93ab13464fd892d684b00b910cbbd3b3e SHA1 4f0b103da52110e7f60d1d7676727103aca9785e SHA256 bc531761287156e17476395c42664a15373723f54a6f80f192cda47771ec1225
EBUILD atlas-3.8.3.ebuild 6019 RMD160 10c7b3937ec41c2c182f1faecbcf7c2e8901befe SHA1 15ebfd302a3764880fc599a7d1cdc59a214e3a27 SHA256 cc3139e44d2da073767df95280be90413fe39f5e02e0ce5243ff2267891d3e16
-EBUILD atlas-3.9.37.ebuild 5910 RMD160 19b1474617f773c18046062ab52d2b41dcdbc8a0 SHA1 f2526da1e7c19c27d7f43177c4e81033e497842a SHA256 61f22142e56bad5c2a10775dd7432efc1cecfbefe8bc2220b35a569940b5b529
-MISC ChangeLog 431 RMD160 5029ae5bb2dbcffadeb2485dc2d661e16c4bb7c8 SHA1 48b805b587c2d16f4994ab0a94f1199c9ca74528 SHA256 27c95c5cd6c008e15c7e0dae1b3c6acee327c2b17de8646cee33d3efd66331bc
+EBUILD atlas-3.9.39.ebuild 5649 RMD160 dbb82c3751348e40af78177c8cf88cf01fc14a8c SHA1 11d5799aab4bfbe60791dcfb7c8e5147b9b0aa43 SHA256 3d9f47d6559038b18cef20ca685db84289e706e1408a852dfa1902a4d71dd5a1
+MISC ChangeLog 621 RMD160 755eab85fb123a94aa51ad5cd331f2a51191f1d0 SHA1 123bb45ac67e3048c72d06505fc665923cabce03 SHA256 0baa2873a98dc52777c96696648f06ad7b51473fa08b6fa0ca03964ab54af3b7
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.39.ebuild b/sci-libs/atlas/atlas-3.9.39.ebuild
index 861c26b..6fddc3e 100644
--- a/sci-libs/atlas/atlas-3.9.39.ebuild
+++ b/sci-libs/atlas/atlas-3.9.39.ebuild
@@ -2,7 +2,7 @@
# Distributed under the terms of the GNU General Public License v2
# $Header: $
-EAPI=3
+EAPI=4
inherit eutils toolchain-funcs multilib versionator alternatives-2
LAPACKP=lapack-3.3.0
@@ -15,45 +15,14 @@ SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE="fortran doc lapack openmp static-libs"
+IUSE="fortran doc lapack openmp static-libs threads"
RDEPEND=""
DEPEND="${RDEPEND}"
S="${WORKDIR}/ATLAS"
-make_shared_lib() {
- local soname=$(basename "${1%.a}").so.${3:-$(get_major_version)}
- einfo "Making ${soname}"
- ${2} ${LDFLAGS} \
- -shared -Wl,-soname="${soname}" \
- -Wl,--whole-archive "${1}" -Wl,--no-whole-archive \
- -o $(dirname "${1}")/"${soname}" || return 1
-}
-
-pkg_setup() {
- if [[ -n $(type -P cpufreq-info) ]]; then
- [[ -z $(cpufreq-info -d) ]] && return
- local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
- local cpu=0
- while [[ ${cpu} -lt ${ncpu} ]]; do
- if "$(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance)"; then
- ewarn "CPU $cpu is not set to performance"
- ewarn "Run sudo cpufreq-set -g performance -c <CPU #> for all CPUs"
- die "${PN} needs all cpu set to performance"
- fi
- cpu=$(( cpu + 1 ))
- done
- else
- ewarn "Please make sure to disable CPU throttling completely"
- ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
- ewarn "generated timings will be completely random and the"
- ewarn "performance of the resulting libraries will be degraded"
- ewarn "considerably."
- fi
-}
-
-src_configure() {
+atlas_configure() {
local myconf=(
"--prefix=${ED}/usr"
"--libdir=${ED}/usr/$(get_libdir)"
@@ -63,10 +32,19 @@ src_configure() {
"-D c -DWALL"
"-F ac '${CFLAGS}'"
"-Si cputhrchk 0"
- $(use openmp && echo "-Si omp 1" || echo "-Si omp 0")
"-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
)
+ # OpenMP shown to decreased performance over POSIX threads
+ # (at least in 3.9.39, see atlas-dev mailing list)
+ if use threads; then
+ myconf+=( "-t -1" )
+ elif use openmp; then
+ myconf+=( "-Si omp 2" )
+ else
+ myconf+=( "-t 0" "-Si omp 0" )
+ fi
+
if use amd64 || use ppc64 || use sparc; then
if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
myconf+=( "-b 64" )
@@ -101,112 +79,138 @@ src_configure() {
"--nof77"
)
fi
-
- if use static-libs; then
- mkdir "${S}_build_static" && cd "${S}_build_static"
- "${S}"/configure ${myconf[@]} || die "configure static failed"
- fi
-
- mkdir "${S}_build_shared" && cd "${S}_build_shared"
- myconf+=( "-Fa alg -fPIC" )
- "${S}"/configure ${myconf[@]} || die "configure shared failed"
+ local confdir="${S}_${1}"; shift
+ myconf+=( $@ )
+ mkdir "${confdir}" && cd "${confdir}"
+ "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
}
-src_compile() {
+atlas_compile() {
+ pushd "${S}_${1}" > /dev/null
# atlas does its own parallel builds
- if use static-libs; then
- cd "${S}_build_static"
- emake -j1 build || die "emake static failed"
- cd lib
- emake libclapack.a || die
- # rename to avoid collisions
- mv lib{,a}cblas.a && [[ -e liblapack.a ]] && mv lib{,a}lapack.a
- fi
- cd "${S}_build_shared"
- emake -j1 build || die "emake static with PIC failed"
+ emake -j1 build
cd lib
- emake libclapack.a || die
- # rename to avoid collisions
- mv lib{,a}cblas.a && [[ -e liblapack.a ]] && mv lib{,a}lapack.a
- make_shared_lib libatlas.a $(tc-getCC) || die
- make_shared_lib libacblas.a $(tc-getCC) 1 || die
- make_shared_lib libclapack.a $(tc-getCC) || die
- if use fortran; then
- make_shared_lib libf77blas.a $(tc-getFC) 1 || die
- use lapack && make_shared_lib libalapack.a $(tc-getFC) 3 || die
- fi
- if [[ -e libptcblas.a ]]; then
- make_shared_lib libptcblas.a $(tc-getCC) 1 || die
- use fortran && make_shared_lib libptf77blas.a $(tc-getCC) 1 || die
- fi
+ emake libclapack.a
+ [[ -e libptcblas.a ]] && emake libptclapack.a
+ popd > /dev/null
}
-src_test() {
- cd "${S}_build_shared"
- emake -j1 check || die "emake check failed"
- emake -j1 time || die "emake time failed"
+atlas_install_libs() {
+ local libname=$(basename ${1%.*})
+ einfo "Installing ${libname}"
+ local soname=${libname}.so.$(get_major_version)
+ shift
+ pushd "${S}_shared"/lib > /dev/null
+ $(tc-getCC) ${LDFLAGS} -Wl,-soname=${soname} \
+ -shared -Wl,-soname=${soname} \
+ -Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
+ "$@" -o ${soname} || die "Creating ${soname} failed"
+ dolib.so ${soname}
+ dosym ${soname} /usr/$(get_libdir)/${soname%.*}
+ popd > /dev/null
+ use static-libs && dolib.a "${S}_static"/lib/${libname}.a
}
-# atlas_make_profile <blas|cblas|lapack> <lib>
-atlas_make_profile() {
- local name=${1}; shift
- local prof=${PN}-${name}
- [[ ${libs} =~ pt ]] && prof=${prof}-threads
- cat <<-EOF > ${prof}.pc
+# atlas_install_lib <lib>
+atlas_install_profile() {
+ local libname=$(basename ${1%.*})
+ local modname=$(echo ${libname} | sed -r -e 's/lib(pt|f77|ptf77)//')
+ local profname=${PN}-${modname}
+ [[ ${libname} =~ pt ]] && profname=${profname}-threads
+ # avoid conflict with other implementations
+ if [[ ${libname} == lib${modname} ]]; then
+ mv ${libname}.a ${libname/lib/libatl}.a
+ libname=${libname/lib/libatl}
+ fi
+ atlas_install_libs ${libname} -L. -latlas ${libs}
+ cat <<-EOF > ${profname}.pc
prefix=${EPREFIX}/usr
libdir=\${prefix}/$(get_libdir)
includedir=\${prefix}/include
- Name: ${prof}
- Description: ${DESCRIPTION} ${name} implementation
+ Name: ${profname}
+ Description: ${PN} ${profname}
Version: ${PV}
URL: ${HOMEPAGE}
- Libs: -L\${libdir} $@ -latlas
+ Libs: -L\${libdir} -l${libname} ${LIBS}
Private: -lm
Cflags: -I\${includedir}/${PN}
- $([[ ${1} == lapack ]] && echo "Requires: cblas blas")
EOF
+
+ if [[ ${modname} == clapack ]]; then
+ echo "Requires: cblas" >> ${profname}.pc
+ elif [[ ${modname} == lapack ]]; then
+ echo "Requires: cblas blas" >> ${profname}.pc
+ fi
+
insinto /usr/$(get_libdir)/pkgconfig
- doins ${prof}.pc || die
- if [[ ${name} == cblas ]]; then
- alternatives_for ${name} ${prof} 0 \
- "/usr/$(get_libdir)/pkgconfig/${name}.pc" "${prof}.pc" \
- "/usr/include/cblas.h" "${PN}/cblas.h"
+ doins ${profname}.pc
+ [[ ${modname} == clapack ]] && return
+
+ if [[ ${modname} == cblas ]]; then
+ alternatives_for ${modname} ${profname} 0 \
+ /usr/$(get_libdir)/pkgconfig/${modname}.pc ${profname}.pc \
+ /usr/include/cblas.h ${PN}/cblas.h
else
- alternatives_for ${name} ${prof} 0 \
- "/usr/$(get_libdir)/pkgconfig/${name}.pc" "${prof}.pc"
+ alternatives_for ${modname} ${profname} 0 \
+ /usr/$(get_libdir)/pkgconfig/${modname}.pc ${profname}.pc
fi
}
+pkg_setup() {
+ if [[ -n $(type -P cpufreq-info) ]]; then
+ [[ -z $(cpufreq-info -d) ]] && return
+ local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
+ local cpu=0
+ while [[ ${cpu} -lt ${ncpu} ]]; do
+ if "$(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance)"; then
+ ewarn "CPU $cpu is not set to performance"
+ ewarn "Run sudo cpufreq-set -g performance -c <CPU #> for all CPUs"
+ die "${PN} needs all cpu set to performance"
+ fi
+ cpu=$(( cpu + 1 ))
+ done
+ else
+ ewarn "Please make sure to disable CPU throttling completely"
+ ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
+ ewarn "generated timings will be completely random and the"
+ ewarn "performance of the resulting libraries will be degraded"
+ ewarn "considerably."
+ fi
+}
+
+src_configure() {
+ atlas_configure shared "-Fa alg -fPIC"
+ use static-libs && atlas_configure static
+}
+
+src_compile() {
+ atlas_compile shared
+ use static-libs && atlas_compile static
+}
+
+src_test() {
+ cd "${S}_shared"
+ emake -j1 check || die "emake check failed"
+ emake -j1 time || die "emake time failed"
+}
+
src_install() {
- # do a loop to make sure we install the same in shared/static
+ cd "${S}_shared/lib"
+ LIBS=-lm
+ [[ -e libptcblas.a ]] && LIBS="${libs} -lpthread"
+ atlas_install_libs libatlas.a
local l
- for l in "${S}_build_shared"/lib/lib*.so.*; do
- if use static-libs; then
- dolib.a "${l/_shared/_static}".a || die
- fi
- dolib.so "${l}" || die
- l=$(basename "${l}")
- dosym ${l} /usr/$(get_libdir)/${l%.*}
+ for l in lib*{blas,lapack}.a; do
+ atlas_install_profile ${l}
done
- atlas_make_profile cblas -lacblas
- if use fortran; then
- atlas_make_profile blas -lf77blas
- use lapack && atlas_make_profile lapack -lalapack
- fi
- if [[ -e ${S}_build_shared/lib/libptcblas.a ]]; then
- atlas_make_profile cblas -lptcblas -lpthread
- use fortran && atlas_make_profile blas -lptf77blas -lpthread
- fi
+
+ cd "${S}"
insinto /usr/include/${PN}
- doins include/*.h || die
- dosym atlas/clapack.h /usr/include/clapack.h
+ doins include/*.h
- cd doc
+ cd "${S}/doc"
dodoc INDEX.txt AtlasCredits.txt ChangeLog
- if use doc; then
- insinto /usr/share/doc/${PF}
- doins atlas*pdf cblas.pdf cblasqref.pdf || die "doins docs failed"
- use fortran && doins f77blas*pdf
- use fortran && doins lapack*pdf
- fi
+ use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
+ use doc && use fortran && dodoc f77blas*pdf
+ use doc && use fortran && use lapack && dodoc lapack*pdf
}
^ permalink raw reply related [flat|nested] 13+ messages in thread
end of thread, other threads:[~2011-08-05 18:40 UTC | newest]
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2011-03-24 21:57 Sebastien Fabbro
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