From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1Qn9DJ-0007sk-Ki for garchives@archives.gentoo.org; Sat, 30 Jul 2011 13:04:27 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 413CE21C3C4 for ; Sat, 30 Jul 2011 13:04:21 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id 9791521C0E8 for ; Sat, 30 Jul 2011 12:55:25 +0000 (UTC) Received: from pelican.gentoo.org (unknown [66.219.59.40]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id CC9F31B401D for ; Sat, 30 Jul 2011 12:55:24 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by pelican.gentoo.org (Postfix) with ESMTP id 329798003D for ; Sat, 30 Jul 2011 12:55:24 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <73f28443211e5c078772c8eced7e433746e6ae9c.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/gbench/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/gbench/ChangeLog sci-biology/gbench/gbench-2.3.2.ebuild sci-biology/gbench/metadata.xml X-VCS-Directories: sci-biology/gbench/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: 73f28443211e5c078772c8eced7e433746e6ae9c Date: Sat, 30 Jul 2011 12:55:24 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: X-Archives-Hash: 3dd8ebe977eb8f56b0aa418aa129805e commit: 73f28443211e5c078772c8eced7e433746e6ae9c Author: Martin Mokrejs fold natur cuni cz> AuthorDate: Sat Jul 30 12:54:25 2011 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Sat Jul 30 12:54:25 2011 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=3Dproj/sci.git;a=3Dc= ommit;h=3D73f28443 backbone of a new package, should probably use a lot of stuff from ncbi-t= ools++ ebuild (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit) --- sci-biology/gbench/ChangeLog | 11 ++++++ sci-biology/gbench/gbench-2.3.2.ebuild | 55 ++++++++++++++++++++++++++= ++++++ sci-biology/gbench/metadata.xml | 5 +++ 3 files changed, 71 insertions(+), 0 deletions(-) diff --git a/sci-biology/gbench/ChangeLog b/sci-biology/gbench/ChangeLog new file mode 100644 index 0000000..00fb7d5 --- /dev/null +++ b/sci-biology/gbench/ChangeLog @@ -0,0 +1,11 @@ +# ChangeLog for sci-biology/gbench +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*gbench-2.3.2 (30 Jul 2011) + + 30 Jul 2011; Martin Mokrejs + +gbench-2.3.2.ebuild, +metadata.xml: + backbone of a new package, should probably use a lot of stuff from + ncbi-tools++ ebuild + diff --git a/sci-biology/gbench/gbench-2.3.2.ebuild b/sci-biology/gbench/= gbench-2.3.2.ebuild new file mode 100644 index 0000000..e9bf5b5 --- /dev/null +++ b/sci-biology/gbench/gbench-2.3.2.ebuild @@ -0,0 +1,55 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=3D3 + +inherit wxwidgets + +DESCRIPTION=3D"View and analyze genome sequences" +HOMEPAGE=3D"http://www.ncbi.nlm.nih.gov/projects/gbench/" +SRC_URI=3D"ftp://ftp.ncbi.nlm.nih.gov/toolbox/gbench/ver-2.3.2/gbench-sr= c-"${PV}".tgz" + +LICENSE=3D"public-domain" +SLOT=3D"0" +KEYWORDS=3D"" +#KEYWORDS=3D"~amd64 ~x86" +IUSE=3D"xml ssl sybase-ct zlib lzo pcre gnutls freetds mysql berkdb pyth= on opengl glut icu expat sqlite hdf5 jpeg png tiff gif xpm sybase threads= fltk cgi" + +DEPEND=3D"sys-fs/fuse + app-arch/bzip2 + dev-libs/lzo + pcre? ( dev-libs/libpcre ) + net-libs/gnutls + ssl? ( dev-libs/openssl ) + sybase-ct? ( dev-db/freetds ) + mysql? ( virtual/mysql ) + sys-libs/db + dev-lang/python + dev-libs/boost + virtual/opengl + virtual/glut + media-libs/glew + x11-libs/wxGTK + dev-libs/icu + dev-libs/expat + app-text/sablotron + xml? ( dev-libs/libxml2 ) + dev-libs/libxslt + sqlite? ( dev-db/sqlite:3 ) + sci-libs/hdf5 + media-libs/tiff + media-libs/giflib + xpm? ( x11-libs/libXpm + virtual/jpeg + media-libs/libpng sys-libs/zlib ) + media-libs/freetype + x11-libs/fltk + dev-libs/xerces-c + dev-libs/xalan-c + dev-cpp/muParser + dev-util/cppunit" + +RDEPEND=3D"${DEPEND}" + +# ensure in src_compile no --mandir=3D/usr/share/man is passed to config= ure, use the ebuild logic from ncbi-tools++ diff --git a/sci-biology/gbench/metadata.xml b/sci-biology/gbench/metadat= a.xml new file mode 100644 index 0000000..d464821 --- /dev/null +++ b/sci-biology/gbench/metadata.xml @@ -0,0 +1,5 @@ + + + + sci-biology +