From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1Qisav-0001BA-EY for garchives@archives.gentoo.org; Mon, 18 Jul 2011 18:31:05 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id D689721C093; Mon, 18 Jul 2011 18:30:56 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id 9310C21C093 for ; Mon, 18 Jul 2011 18:30:56 +0000 (UTC) Received: from pelican.gentoo.org (unknown [66.219.59.40]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id D039C1BC011 for ; Mon, 18 Jul 2011 18:30:55 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by pelican.gentoo.org (Postfix) with ESMTP id F0ED28003D for ; Mon, 18 Jul 2011 18:30:54 +0000 (UTC) From: "Christoph Junghans" To: gentoo-commits@lists.gentoo.org Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Christoph Junghans" Message-ID: <20fa00bedff3a9f94ae96642459d0cef2d4d9459.kleiner_otti@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/gromacs/ X-VCS-Repository: proj/sci X-VCS-Files: sci-chemistry/gromacs/ChangeLog sci-chemistry/gromacs/gromacs-4.5.9999.ebuild sci-chemistry/gromacs/gromacs-9999.ebuild X-VCS-Directories: sci-chemistry/gromacs/ X-VCS-Committer: kleiner_otti X-VCS-Committer-Name: Christoph Junghans X-VCS-Revision: 20fa00bedff3a9f94ae96642459d0cef2d4d9459 Date: Mon, 18 Jul 2011 18:30:54 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: X-Archives-Hash: 3edaebbb8e8385a1f1165bd9041a381f commit: 20fa00bedff3a9f94ae96642459d0cef2d4d9459 Author: Christoph Junghans gentoo org> AuthorDate: Mon Jul 18 18:30:34 2011 +0000 Commit: Christoph Junghans gmx de> CommitDate: Mon Jul 18 18:30:34 2011 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=3Dproj/sci.git;a=3Dc= ommit;h=3D20fa00be [sci-chemistry/gromacs] sync with tree (Portage version: 2.1.10.3/git/Linux i686, signed Manifest commit with ke= y C2000586) --- sci-chemistry/gromacs/ChangeLog | 4 ++++ sci-chemistry/gromacs/gromacs-4.5.9999.ebuild | 6 +++++- sci-chemistry/gromacs/gromacs-9999.ebuild | 6 +++++- 3 files changed, 14 insertions(+), 2 deletions(-) diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/Chan= geLog index dfa2b28..07318f1 100644 --- a/sci-chemistry/gromacs/ChangeLog +++ b/sci-chemistry/gromacs/ChangeLog @@ -2,6 +2,10 @@ # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ =20 + 18 Jul 2011; Christoph Junghans gromacs-4.5.9999.e= build, + gromacs-9999.ebuild: + sync with tree + 25 Jun 2011; Christoph Junghans gromacs-4.5.9999.e= build, gromacs-9999.ebuild: migrate to git-2 diff --git a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild b/sci-chemistr= y/gromacs/gromacs-4.5.9999.ebuild index 349e828..8235a5b 100644 --- a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild +++ b/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild @@ -7,6 +7,9 @@ EAPI=3D"4" TEST_PV=3D"4.0.4" MANUAL_PV=3D"4.5.4" =20 +#to find external blas/lapack +CMAKE_MIN_VERSION=3D"2.8.5-r2" + inherit bash-completion cmake-utils eutils fortran-2 multilib toolchain-= funcs =20 SRC_URI=3D"test? ( ftp://ftp.gromacs.org/pub/tests/gmxtest-${TEST_PV}.tg= z ) @@ -31,7 +34,6 @@ mpi +single-precision sse2 test +threads xml zsh-comple= tion" REQUIRED_USE=3D"fkernels? ( !threads )" =20 CDEPEND=3D" - fkernels? ( virtual/fortran ) X? ( x11-libs/libX11 x11-libs/libSM @@ -39,6 +41,7 @@ CDEPEND=3D" ) blas? ( virtual/blas ) fftw? ( sci-libs/fftw:3.0 ) + fkernels? ( virtual/fortran ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mpi? ( virtual/mpi ) @@ -141,6 +144,7 @@ src_configure() { $(cmake-utils_use xml GMX_XML) -DGMX_DEFAULT_SUFFIX=3Doff -DGMX_ACCELERATION=3D"$acce" + -DGMXLIB=3D"$(get_libdir)" ) =20 for x in ${GMX_DIRS}; do diff --git a/sci-chemistry/gromacs/gromacs-9999.ebuild b/sci-chemistry/gr= omacs/gromacs-9999.ebuild index 4a98882..7ac7911 100644 --- a/sci-chemistry/gromacs/gromacs-9999.ebuild +++ b/sci-chemistry/gromacs/gromacs-9999.ebuild @@ -9,6 +9,9 @@ TEST_PV=3D"4.0.4" EGIT_REPO_URI=3D"git://git.gromacs.org/gromacs" EGIT_BRANCH=3D"master" =20 +#to find external blas/lapack +CMAKE_MIN_VERSION=3D"2.8.5-r2" + inherit bash-completion cmake-utils eutils fortran-2 git-2 multilib tool= chain-funcs =20 DESCRIPTION=3D"The ultimate molecular dynamics simulation package" @@ -23,7 +26,6 @@ mpi +single-precision sse2 test +threads xml zsh-comple= tion" REQUIRED_USE=3D"fkernels? ( !threads )" =20 CDEPEND=3D" - fkernels? ( virtual/fortran ) X? ( x11-libs/libX11 x11-libs/libSM @@ -31,6 +33,7 @@ CDEPEND=3D" ) blas? ( virtual/blas ) fftw? ( sci-libs/fftw:3.0 ) + fkernels? ( virtual/fortran ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mpi? ( virtual/mpi ) @@ -134,6 +137,7 @@ src_configure() { $(cmake-utils_use xml GMX_XML) -DGMX_DEFAULT_SUFFIX=3Doff -DGMX_ACCELERATION=3D"$acce" + -DGMXLIB=3D"$(get_libdir)" ) =20 for x in ${GMX_DIRS}; do