* [gentoo-commits] gentoo-x86 commit in sci-biology/allpathslg: allpathslg-47093.ebuild ChangeLog
@ 2015-03-31 9:32 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2015-03-31 9:32 UTC (permalink / raw
To: gentoo-commits
jlec 15/03/31 09:32:52
Modified: allpathslg-47093.ebuild ChangeLog
Log:
Fix for newer gcc, bug #514654
(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path
1.3 sci-biology/allpathslg/allpathslg-47093.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?r1=1.2&r2=1.3
Index: allpathslg-47093.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- allpathslg-47093.ebuild 13 Nov 2013 02:34:46 -0000 1.2
+++ allpathslg-47093.ebuild 31 Mar 2015 09:32:52 -0000 1.3
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v 1.2 2013/11/13 02:34:46 patrick Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v 1.3 2015/03/31 09:32:52 jlec Exp $
EAPI=5
@@ -22,13 +22,13 @@
RDEPEND=""
src_prepare() {
+ epatch "${FILESDIR}"/${P}-gcc4.9.patch
sed -i 's/-ggdb//' configure.ac || die
eautoreconf
}
src_install() {
default
-# einstall || die
# Provided by sci-biology/vaal
for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
rm "${D}/usr/bin/$i" || die
1.17 sci-biology/allpathslg/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.17&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.17&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?r1=1.16&r2=1.17
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -r1.16 -r1.17
--- ChangeLog 13 Nov 2013 02:34:46 -0000 1.16
+++ ChangeLog 31 Mar 2015 09:32:52 -0000 1.17
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/allpathslg
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.16 2013/11/13 02:34:46 patrick Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.17 2015/03/31 09:32:52 jlec Exp $
+
+ 31 Mar 2015; Justin Lecher <jlec@gentoo.org>
+ +files/allpathslg-47093-gcc4.9.patch, allpathslg-47093.ebuild:
+ Fix for newer gcc, bug #514654
13 Nov 2013; Patrick Lauer <patrick@gentoo.org> allpathslg-42337.ebuild,
allpathslg-47093.ebuild:
^ permalink raw reply [flat|nested] 2+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/allpathslg: allpathslg-47093.ebuild ChangeLog
@ 2015-03-31 9:35 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2015-03-31 9:35 UTC (permalink / raw
To: gentoo-commits
jlec 15/03/31 09:35:15
Modified: allpathslg-47093.ebuild ChangeLog
Log:
prefix love
(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path
1.4 sci-biology/allpathslg/allpathslg-47093.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild?r1=1.3&r2=1.4
Index: allpathslg-47093.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- allpathslg-47093.ebuild 31 Mar 2015 09:32:52 -0000 1.3
+++ allpathslg-47093.ebuild 31 Mar 2015 09:35:15 -0000 1.4
@@ -1,10 +1,10 @@
# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v 1.3 2015/03/31 09:32:52 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-47093.ebuild,v 1.4 2015/03/31 09:35:15 jlec Exp $
EAPI=5
-inherit autotools flag-o-matic
+inherit autotools eutils flag-o-matic
DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
@@ -31,6 +31,6 @@
default
# Provided by sci-biology/vaal
for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
- rm "${D}/usr/bin/$i" || die
+ rm "${ED}/usr/bin/$i" || die
done
}
1.18 sci-biology/allpathslg/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.18&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?rev=1.18&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/allpathslg/ChangeLog?r1=1.17&r2=1.18
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v
retrieving revision 1.17
retrieving revision 1.18
diff -u -r1.17 -r1.18
--- ChangeLog 31 Mar 2015 09:32:52 -0000 1.17
+++ ChangeLog 31 Mar 2015 09:35:15 -0000 1.18
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/allpathslg
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.17 2015/03/31 09:32:52 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.18 2015/03/31 09:35:15 jlec Exp $
+
+ 31 Mar 2015; Justin Lecher <jlec@gentoo.org> allpathslg-47093.ebuild:
+ prefix love
31 Mar 2015; Justin Lecher <jlec@gentoo.org>
+files/allpathslg-47093-gcc4.9.patch, allpathslg-47093.ebuild:
^ permalink raw reply [flat|nested] 2+ messages in thread
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