[gentoo-commits] gentoo-x86 commit in sci-chemistry/openbabel-python/files: openbabel-python-2.3.2-swig-3.0.3.patch

[gentoo-commits] gentoo-x86 commit in sci-chemistry/openbabel-python/files: openbabel-python-2.3.2-swig-3.0.3.patch

[Justin Lecher (jlec)]

jlec        15/01/11 14:36:40

  Added:                openbabel-python-2.3.2-swig-3.0.3.patch
  Log:
  sci-chemistry/openbabel-python: Fix for swig-3.0.3, #536180
  
  (Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)

Revision  Changes    Path
1.1                  sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch?rev=1.1&content-type=text/plain

Index: openbabel-python-2.3.2-swig-3.0.3.patch
===================================================================
 scripts/openbabel-python.i | 34 +++++++++++++++++-----------------
 1 file changed, 17 insertions(+), 17 deletions(-)

diff --git a/scripts/openbabel-python.i b/scripts/openbabel-python.i
index 7cb8f24..d893129 100644
--- a/scripts/openbabel-python.i
+++ b/scripts/openbabel-python.i
@@ -227,7 +227,7 @@ CAST_GENERICDATA_TO(SquarePlanarStereo)
 %include <openbabel/math/transform3d.h>
 %include <openbabel/math/spacegroup.h>
 
-# CloneData should be used instead of the following method
+// CloneData should be used instead of the following method
 %ignore OpenBabel::OBBase::SetData;
 %include <openbabel/base.h>
 
@@ -289,7 +289,7 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
 %ignore OpenBabel::OBDescriptor::LessThan;
 %include <openbabel/descriptor.h>
 
-# Ignore shadowed methods
+// Ignore shadowed methods
 %ignore OpenBabel::OBForceField::VectorSubtract(const double *const, const double *const, double *);
 %ignore OpenBabel::OBForceField::VectorMultiply(const double *const, const double, double *);
 %include <openbabel/forcefield.h>
@@ -310,7 +310,7 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
 
 %warnfilter(503) OpenBabel::OBBitVec; // Not wrapping any of the overloaded operators
 %include <openbabel/bitvec.h>
-# Ignore shadowed method
+// Ignore shadowed method
 %ignore OpenBabel::OBRotor::GetRotAtoms() const;
 %include <openbabel/rotor.h>
 %ignore OpenBabel::Swab;
@@ -321,13 +321,13 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
 %include <openbabel/math/align.h>
 #endif
 
-# The following %ignores avoid warning messages due to shadowed classes.
-# This does not imply a loss of functionality as (in this case)
-# the shadowed class is identical (from the point of view of SWIG) to
-# the shadowing class.
-# This is because C++ references (&) are transformed by SWIG back into
-# pointers, so that OBAtomIter(OBMol &) would be treated the same as
-# OBAtomIter(OBMol *).
+// The following %ignores avoid warning messages due to shadowed classes.
+// This does not imply a loss of functionality as (in this case)
+// the shadowed class is identical (from the point of view of SWIG) to
+// the shadowing class.
+// This is because C++ references (&) are transformed by SWIG back into
+// pointers, so that OBAtomIter(OBMol &) would be treated the same as
+// OBAtomIter(OBMol *).
 
 %ignore OBAtomAtomIter(OBAtom &);
 %ignore OBAtomBondIter(OBAtom &);
@@ -346,9 +346,9 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
 %ignore OBResidueIter(OBMol &);
 %ignore OBResidueAtomIter(OBResidue &);
 
-# These classes are renamed so that they can be replaced by Python
-# classes of the same name which provide Pythonic iterators
-# (see %pythoncode section below)
+// These classes are renamed so that they can be replaced by Python
+// classes of the same name which provide Pythonic iterators
+// (see %pythoncode section below)
 
 %rename(_OBAtomAtomIter) OpenBabel::OBAtomAtomIter;
 %rename(_OBAtomBondIter) OpenBabel::OBAtomBondIter;
@@ -367,8 +367,8 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
 
 %include <openbabel/obiter.h>
 
-# The following class, OBiter, is subclassed to provide Python iterators
-# equivalent to the C++ iterators in obiter.h and the plugin iterators
+// The following class, OBiter, is subclassed to provide Python iterators
+// equivalent to the C++ iterators in obiter.h and the plugin iterators
 
 %pythoncode %{
 class OBIter(object):
@@ -459,7 +459,7 @@ def double_array(mylist):
     return c
 %}
 
-# Copy some of the global variables in cvar into the openbabel namespace
+// Copy some of the global variables in cvar into the openbabel namespace
 
 %pythoncode %{
 obErrorLog = cvar.obErrorLog
@@ -470,7 +470,7 @@ atomtyper = cvar.atomtyper
 aromtyper = cvar.aromtyper
 %}
 
-# Functions to set the log file to std::cout and std::cerr
+// Functions to set the log file to std::cout and std::cerr
        
 %ignore OBForceField::SetLogFile(std::ostream *pos);
 %extend OpenBabel::OBForceField {