[gentoo-commits] gentoo-x86 commit in sci-libs/htslib: htslib-1.0.ebuild ChangeLog metadata.xml Manifest

[gentoo-commits] gentoo-x86 commit in sci-libs/htslib: htslib-1.0.ebuild ChangeLog metadata.xml Manifest

[Justin Lecher (jlec)]

jlec        14/09/20 19:06:01

  Added:                htslib-1.0.ebuild ChangeLog metadata.xml Manifest
  Log:
  sci-libs/htslib: New addition, written by me
  
  (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)

Revision  Changes    Path
1.1                  sci-libs/htslib/htslib-1.0.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/htslib-1.0.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/htslib-1.0.ebuild?rev=1.1&content-type=text/plain

Index: htslib-1.0.ebuild
===================================================================
# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/htslib-1.0.ebuild,v 1.1 2014/09/20 19:06:01 jlec Exp $

EAPI=5

inherit multilib toolchain-funcs

DESCRIPTION="C library for high-throughput sequencing data formats"
HOMEPAGE="http://www.htslib.org/"
SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"

SLOT="0"
LICENSE="MIT"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

src_compile() {
	emake \
		AR="$(tc-getAR)" \
		CC="$(tc-getCC)" \
		CFLAGS="${CFLAGS}" \
		LDFLAGS="${LDFLAGS}"
}

src_install() {
	emake \
		prefix="${ED}"/usr \
		libdir="${ED}"/usr/$(get_libdir) \
		install

	rm "${ED}/usr/share/man/man1/libhts.so.1" || die

	dodoc README
}



1.1                  sci-libs/htslib/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/ChangeLog?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/ChangeLog?rev=1.1&content-type=text/plain

Index: ChangeLog
===================================================================
# ChangeLog for sci-libs/htslib
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/ChangeLog,v 1.1 2014/09/20 19:06:01 jlec Exp $

*htslib-1.0 (20 Sep 2014)

  20 Sep 2014; Justin Lecher <jlec@gentoo.org> +htslib-1.0.ebuild,
  +metadata.xml:
  New addition, written by me




1.1                  sci-libs/htslib/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/metadata.xml?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/metadata.xml?rev=1.1&content-type=text/plain

Index: metadata.xml
===================================================================
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
  <herd>sci-biology</herd>
</pkgmetadata>



1.1                  sci-libs/htslib/Manifest

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/Manifest?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/htslib/Manifest?rev=1.1&content-type=text/plain

Index: Manifest
===================================================================
DIST htslib-1.0.tar.bz2 842174 SHA256 3d53fb081fafd930cadfee6f950faacc1993a0f4a9fa329fc897865fc6b331bc SHA512 aee7080a31c3fe5bd1fe4a16102da4aef7d415fd022781c1a5bdc1316ca50f8fcabbb95a39adc867e4eb5ac2d8ed63ab15ceafcd768e840d2593282916313507 WHIRLPOOL 512f4a95e98129151fef34fb90294138bc0aec40d5c2345d15d49ded02810c4663b8ff65726ced9f0d9ceb300295da066f6025d2b1966224937fc9ff58f2b58f
EBUILD htslib-1.0.ebuild 683 SHA256 4c18f49df4cec207f1a87c4441906bded31e46291ae2b0440c46af120b980139 SHA512 480b7ddc7d2f4d7fe3bbb7d25e94636c5e410c08c6f85fea039d9a185776067e64e6fc624b12ad9a8f78b15d8c3b169ffbddf486fbe0fe0d11c4d7cf3487183b WHIRLPOOL fb4647462aa17fe35e0b0fbfbd976c7bfa76d54430e595f7f2e6ac2d91747b61e143e1f3e4adabf9fb094ff11642b14d8bf38ffb0eb977e86fa43c6eec8d05a9
MISC ChangeLog 258 SHA256 fe76daef45cceeaf799407b5035c6a14d78c796bb53451a545730db04850e5f8 SHA512 0e077a6de9a9978f55e0d4cdad92d02a61b972ca230c0148fc7c8d92d4ae653bae190cce297c3adc191307140146df06bd899d8f3c7559a2a447534a9a84e375 WHIRLPOOL 0e1dec941a84844e67e28bcd084ba7ef5a669daef93a380aaaf416fb73a8e417af4cd07d36b08c0a47d76834e83a14396c02e8fc0a0942e44a7dd5edeea530d9
MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3