[gentoo-commits] gentoo-x86 commit in sci-biology/bedtools: bedtools-2.20.1.ebuild ChangeLog

[gentoo-commits] gentoo-x86 commit in sci-biology/bedtools: bedtools-2.20.1.ebuild ChangeLog

[Sven Vermeulen (swift)]

swift       14/05/30 20:16:25

  Modified:             ChangeLog
  Added:                bedtools-2.20.1.ebuild
  Log:
  Add bedtools 2.20.1 thanks to Martin Mokrejs (bug #505538)
  
  (Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key 0x2EDD52403B68AF47)

Revision  Changes    Path
1.7                  sci-biology/bedtools/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?rev=1.7&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?rev=1.7&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/ChangeLog?r1=1.6&r2=1.7

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -r1.6 -r1.7
--- ChangeLog	24 Mar 2014 13:15:20 -0000	1.6
+++ ChangeLog	30 May 2014 20:16:25 -0000	1.7
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/bedtools
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.6 2014/03/24 13:15:20 jer Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.7 2014/05/30 20:16:25 swift Exp $
+
+*bedtools-2.20.1 (30 May 2014)
+
+  30 May 2014; Sven Vermeulen <swift@gentoo.org> +bedtools-2.20.1.ebuild:
+  Add bedtools 2.20.1 thanks to Martin Mokrejs (bug #505538)
 
   24 Mar 2014; Jeroen Roovers <jer@gentoo.org> metadata.xml:
   New e-mail address.



1.1                  sci-biology/bedtools/bedtools-2.20.1.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/bedtools-2.20.1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bedtools/bedtools-2.20.1.ebuild?rev=1.1&content-type=text/plain

Index: bedtools-2.20.1.ebuild
===================================================================
# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/bedtools-2.20.1.ebuild,v 1.1 2014/05/30 20:16:25 swift Exp $

EAPI=4

inherit flag-o-matic

DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats"
HOMEPAGE="http://code.google.com/p/bedtools/"
SRC_URI="https://github.com/arq5x/bedtools2/releases/download/v${PV}/bedtools-${PV}.tar.gz"

LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~x86 ~amd64"
IUSE=""

S="${WORKDIR}/bedtools2-${PV}"

src_prepare() {
	filter-ldflags -Wl,--as-needed
	sed -i \
		-e '/export CXXFLAGS/ d' \
		-e '/export CXX/ d' \
		Makefile || die
}

src_install() {
	dobin bin/*
	dodoc README* RELEASE_HISTORY
	insinto /usr/share/${PN}
	doins -r genomes
}