From mboxrd@z Thu Jan  1 00:00:00 1970
Return-Path: <gentoo-commits+bounces-600204-garchives=archives.gentoo.org@lists.gentoo.org>
Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80])
	by finch.gentoo.org (Postfix) with ESMTP id 0658A1381F3
	for <garchives@archives.gentoo.org>; Mon, 17 Jun 2013 05:55:50 +0000 (UTC)
Received: from pigeon.gentoo.org (localhost [127.0.0.1])
	by pigeon.gentoo.org (Postfix) with SMTP id D0F6FE0973;
	Mon, 17 Jun 2013 05:55:38 +0000 (UTC)
Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183])
	(using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits))
	(No client certificate requested)
	by pigeon.gentoo.org (Postfix) with ESMTPS id 5556FE0973
	for <gentoo-commits@lists.gentoo.org>; Mon, 17 Jun 2013 05:55:38 +0000 (UTC)
Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163])
	(using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits))
	(No client certificate requested)
	by smtp.gentoo.org (Postfix) with ESMTPS id 3E13933D8CC
	for <gentoo-commits@lists.gentoo.org>; Mon, 17 Jun 2013 05:55:37 +0000 (UTC)
Received: from localhost.localdomain (localhost [127.0.0.1])
	by hornbill.gentoo.org (Postfix) with ESMTP id E2F56E5461
	for <gentoo-commits@lists.gentoo.org>; Mon, 17 Jun 2013 05:55:35 +0000 (UTC)
From: "Justin Lecher" <jlec@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Content-Transfer-Encoding: 8bit
Content-type: text/plain; charset=UTF-8
Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" <jlec@gentoo.org>
Message-ID: <1371413932.e1e48799c623338fedab433347c64dfce9b9aebe.jlec@gentoo>
Subject: [gentoo-commits] proj/sci:ccp4 commit in: /
X-VCS-Repository: proj/sci
X-VCS-Committer: jlec
X-VCS-Committer-Name: Justin Lecher
X-VCS-Revision: e1e48799c623338fedab433347c64dfce9b9aebe
X-VCS-Branch: ccp4
Date: Mon, 17 Jun 2013 05:55:35 +0000 (UTC)
Precedence: bulk
List-Post: <mailto:gentoo-commits@lists.gentoo.org>
List-Help: <mailto:gentoo-commits+help@lists.gentoo.org>
List-Unsubscribe: <mailto:gentoo-commits+unsubscribe@lists.gentoo.org>
List-Subscribe: <mailto:gentoo-commits+subscribe@lists.gentoo.org>
List-Id: Gentoo Linux mail <gentoo-commits.gentoo.org>
X-BeenThere: gentoo-commits@lists.gentoo.org
X-Archives-Salt: d2ff93b8-3e58-46fb-88c1-a78fa05110b5
X-Archives-Hash: fc1217219ff4ca799aa012abd432734b
Message-ID: <20130617055535.8RblOnOxoMyrCYARn8B8tMdUHF_BOJqkAeYHI6nr8SM@z>

commit:     e1e48799c623338fedab433347c64dfce9b9aebe
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 16 20:18:52 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jun 16 20:18:52 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e1e48799

Merge branch 'fixing'

* fixing:
  sci-biology/twinscan: Bump to EAPI=5 and fix license
  sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries
  sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries
  sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path
  sci-biology/quicktree: Bump to EAPI=5 and fix license
  sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf
  sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR
  sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS


 sci-biology/clover/ChangeLog                       |  6 ++-
 sci-biology/clover/Manifest                        |  4 +-
 sci-biology/clover/clover-2010.02.19.ebuild        | 43 ---------------------
 sci-biology/clover/clover-2011.10.24.ebuild        | 40 +++++++++++++++++++
 sci-biology/clover/metadata.xml                    |  6 ++-
 sci-biology/erpin/ChangeLog                        |  5 ++-
 sci-biology/erpin/Manifest                         |  4 +-
 sci-biology/erpin/erpin-5.5b.ebuild                | 23 ++++++-----
 sci-biology/erpin/metadata.xml                     | 10 ++---
 sci-biology/gap2caf/ChangeLog                      |  8 ++++
 sci-biology/gap2caf/Manifest                       |  4 +-
 sci-biology/gap2caf/gap2caf-2.1.0.ebuild           | 45 +++++++++++-----------
 sci-biology/gap2caf/metadata.xml                   | 10 ++---
 sci-biology/quicktree/ChangeLog                    |  6 ++-
 sci-biology/quicktree/Manifest                     |  2 +-
 sci-biology/quicktree/metadata.xml                 | 10 ++---
 sci-biology/quicktree/quicktree-1.1-r1.ebuild      | 17 ++++----
 sci-biology/sequin/ChangeLog                       |  9 ++++-
 sci-biology/sequin/Manifest                        |  4 +-
 sci-biology/sequin/sequin-20090722.ebuild          | 32 ---------------
 sci-biology/sequin/sequin-20121202.ebuild          | 44 +++++++++++++++++++++
 sci-biology/smalt-bin/ChangeLog                    |  8 +++-
 sci-biology/smalt-bin/Manifest                     |  2 +-
 sci-biology/smalt-bin/metadata.xml                 | 10 ++---
 sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild       | 25 ------------
 sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild       | 31 +++++++++++++++
 sci-biology/ssaha2-bin/ChangeLog                   |  6 ++-
 sci-biology/ssaha2-bin/Manifest                    |  9 ++---
 sci-biology/ssaha2-bin/metadata.xml                | 10 ++---
 ...a2-bin-2.5.3.ebuild => ssaha2-bin-2.5.5.ebuild} | 26 ++++++++-----
 sci-biology/twinscan/ChangeLog                     |  6 ++-
 sci-biology/twinscan/Manifest                      |  2 +-
 sci-biology/twinscan/metadata.xml                  | 10 ++---
 sci-biology/twinscan/twinscan-4.1.2.ebuild         | 30 ++++++++++-----
 34 files changed, 292 insertions(+), 215 deletions(-)