[gentoo-commits] gentoo-x86 commit in sci-chemistry/numbat: metadata.xml ChangeLog numbat-0.999.ebuild Manifest

[gentoo-commits] gentoo-x86 commit in sci-chemistry/numbat: metadata.xml ChangeLog numbat-0.999.ebuild Manifest

[Justin Lecher (jlec)]

jlec        13/05/21 10:55:38

  Added:                metadata.xml ChangeLog numbat-0.999.ebuild Manifest
  Log:
  sci-chemistry/numbat: New addition
  
  (Portage version: 2.2.0_alpha176/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)

Revision  Changes    Path
1.1                  sci-chemistry/numbat/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/metadata.xml?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/metadata.xml?rev=1.1&content-type=text/plain

Index: metadata.xml
===================================================================
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
  <herd>sci-chemistry</herd>
  <maintainer>
    <email>jlec@gentoo.org</email>
  </maintainer>
  <longdescription>
Numbat is a user friendly software that fits dX-tensor to a set of PCS 
measurements and a structure from a PDB file. It has also been designed to 
assist in the semi automatic process of PCS assignment. A detailed description 
of the software can be found in this publication: 

Christophe Schmitz, Mitchell J. Stanton-Cook, Xun-Cheng Su, Gottfried Otting, 
and Thomas Huber (2008). Numbat: an interactive software tool for fitting 
Δχ-tensors to molecular coordinates using pseudocontact shifts. Journal of 
Biomolecular NMR. 41:179-189.
</longdescription>
</pkgmetadata>



1.1                  sci-chemistry/numbat/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/ChangeLog?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/ChangeLog?rev=1.1&content-type=text/plain

Index: ChangeLog
===================================================================
# ChangeLog for sci-chemistry/numbat
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/numbat/ChangeLog,v 1.1 2013/05/21 10:55:38 jlec Exp $

*numbat-0.999 (21 May 2013)

  21 May 2013; Justin Lecher <jlec@gentoo.org> +numbat-0.999.ebuild,
  +metadata.xml:
  New addition




1.1                  sci-chemistry/numbat/numbat-0.999.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild?rev=1.1&content-type=text/plain

Index: numbat-0.999.ebuild
===================================================================
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/numbat/numbat-0.999.ebuild,v 1.1 2013/05/21 10:55:38 jlec Exp $

EAPI=5

AUTOTOOLS_AUTORECONF=true

inherit autotools-utils

MY_PN="Numbat"
MY_P="${MY_PN}-${PV}"

DESCRIPTION="new user-friendly method built for automatic dX-tensor determination"
HOMEPAGE="http://www.nmr.chem.uu.nl/~christophe/numbat.html"
SRC_URI="${MY_P}.tar.gz"

SLOT="0"
LICENSE="GPL-3"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

CDEPEND="
	gnome-base/libglade:2.0
	sci-libs/gsl
	x11-libs/gtk+:2"
DEPEND="${CDEPEND}
	virtual/pkgconfig"
RDEPEND="${CDEPEND}
	sci-chemistry/molmol
	sci-chemistry/pymol"

RESTRICT="fetch"

S="${WORKDIR}"/${MY_P}

pkg_nofetch() {
	elog "Please email the author (numbat.pcs@gmail.com)"
	elog "in order to obtain a copy of the source code"
	elog "and place it in ${DISTDIR}"
}

src_prepare() {
	sed \
		-e '/COPYING/d' \
		-e "s:doc/numbat:share/doc/${PF}:g" \
		-i Makefile.am src/common.h || die
	autotools-utils_src_prepare
}

src_install() {
	docompress -x /usr/share/doc/${PF}
	autotools-utils_src_install
}



1.1                  sci-chemistry/numbat/Manifest

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/Manifest?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/numbat/Manifest?rev=1.1&content-type=text/plain

Index: Manifest
===================================================================
DIST Numbat-0.999.tar.gz 739894 SHA256 f58cca5a38abe599a1a27903aeeeafc8ad1d65ab30109e535faabfb85a525b99 SHA512 a2cc784defbc4be8cb04f84d53a8ef8f2fe49b0c778f5acb91c43b3ee8015030632c7c7fed761573f8174ea43d45c86fcdbe16f7dc8f65858e6d50a79e945b7b WHIRLPOOL 10a44ec06a0956966e796235390cf62af752c7a3207b12e8664aa55faba6f8594d706f695f0141bbbd842ec4cfb561ef44ff4327840ae61866c8c9a2dcadb217
EBUILD numbat-0.999.ebuild 1080 SHA256 111df77eddcf14dfa7b023fb8a8e9fd14971eee50ef0a7655c4a0a32852cd9a2 SHA512 cd80384da2b0ec5ee549a035f8e7cce76e5b1d34e11c43dae11d7bd50e46f1b2f74dc1966fe46fdc1a86e6fc2448f51b256a80f4173974a6701f0c9d39bb3dbb WHIRLPOOL 00c320dfd765b3db585d58d31d1f3f9f4840fbc527f619880c22e5f7d4223b0b5d18b7472c4c0868ec01a5e29be8aac731377aece6a796a9875e3f0bd37dcf9f
MISC ChangeLog 252 SHA256 e5813ac9d1300c76a91612509acea9abd4e0a8534485e1c25ba380b67e78db6d SHA512 ba1cc2d69dbb1285ee33a21fba50773a94bb171fb28f095914113b23b224486ad213fa148ce853717ab0fac85c34569b7fe5a6b776e8ed547c2fd9b820f12a1b WHIRLPOOL b8145a6536f0bb847c28924da0c3619ca0085d5d3894461ee5820e8081657b95367d5e01833630e8f01e690a6e70a13af6f57b3bf1a7e6c426f880291847ce6c
MISC metadata.xml 815 SHA256 d206519f00fba341f9532a4d4718574b324095004b39f8d4195914d61cd150d9 SHA512 4d1e29bee0ab5335e1b6684f613d34e29f5b336bb8b64701661c39b80a3029b445d561115f520b3416224ccb02f8e799d2e35e03990a2f1184743448d875c6d6 WHIRLPOOL 485d3f6f307bbebb38bd50ba868edd7149e2ca6b4757aa3b84f79c4b7455d8469ddb643986ecaed93bc83846cae1551f2035fe67fcbbefc24ae082113896b478