* [gentoo-commits] gentoo-x86 commit in sci-mathematics/Macaulay2: Macaulay2-1.6.ebuild ChangeLog
@ 2013-05-15 7:30 Thomas Kahle (tomka)
0 siblings, 0 replies; 4+ messages in thread
From: Thomas Kahle (tomka) @ 2013-05-15 7:30 UTC (permalink / raw
To: gentoo-commits
tomka 13/05/15 07:30:43
Modified: ChangeLog
Added: Macaulay2-1.6.ebuild
Log:
bump to 1.6
(Portage version: 2.1.11.63/cvs/Linux x86_64, signed Manifest commit with key 0x89DEB219565C32BC!)
Revision Changes Path
1.28 sci-mathematics/Macaulay2/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.28&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.28&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?r1=1.27&r2=1.28
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v
retrieving revision 1.27
retrieving revision 1.28
diff -u -r1.27 -r1.28
--- ChangeLog 14 Dec 2011 08:44:52 -0000 1.27
+++ ChangeLog 15 May 2013 07:30:43 -0000 1.28
@@ -1,6 +1,13 @@
# ChangeLog for sci-mathematics/Macaulay2
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.27 2011/12/14 08:44:52 phajdan.jr Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.28 2013/05/15 07:30:43 tomka Exp $
+
+*Macaulay2-1.6 (15 May 2013)
+
+ 15 May 2013; Thomas Kahle <tomka@gentoo.org> +Macaulay2-1.6.ebuild,
+ +files/1.6-lapack.patch, +files/1.6-paths-of-external-programs.patch,
+ +files/1.6-prune-NumAlgGeo-examples.patch:
+ bump to 1.6
14 Dec 2011; Pawel Hajdan jr <phajdan.jr@gentoo.org> Macaulay2-1.4-r1.ebuild:
x86 stable wrt bug #394157
@@ -36,4 +43,3 @@
+files/1.4-paths-of-external-programs.patch, +files/70Macaulay2-gentoo.el,
+Macaulay2-1.4.ebuild, +metadata.xml:
Macaulay2 is back! Was removed in bug #248365, readd fixes bug #246095.
-
1.1 sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.1&content-type=text/plain
Index: Macaulay2-1.6.ebuild
===================================================================
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.1 2013/05/15 07:30:43 tomka Exp $
EAPI=5
inherit autotools elisp-common eutils flag-o-matic python-utils-r1 toolchain-funcs
IUSE="debug emacs optimization"
# Those packages will be built internally.
FACTORY="factory-3-1-6"
LIBFAC="libfac-3-1-6"
GITHUBTAG="release-1.6-stable-20130514"
DESCRIPTION="Research tool for commutative algebra and algebraic geometry"
HOMEPAGE="http://www.math.uiuc.edu/Macaulay2/"
SRC_URI="https://github.com/Macaulay2/M2/archive/${GITHUBTAG}.tar.gz -> ${P}.tar.gz
ftp://www.mathematik.uni-kl.de/pub/Math/Singular/Libfac/${LIBFAC}.tar.gz
ftp://www.mathematik.uni-kl.de/pub/Math/Singular/Factory/factory-gftables.tar.gz
http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/trunk/${FACTORY}.tar.gz
http://www.math.uiuc.edu/Macaulay2/Extra/gtest-1.6.0.tar.gz
http://www.mathematik.uni-osnabrueck.de/normaliz/Normaliz2.10/Normaliz2.10.zip"
# Need normaliz for an up to date normaliz.m2
SLOT="0"
LICENSE="GPL-2"
KEYWORDS="~amd64 ~x86"
DEPEND="
sys-process/time
virtual/pkgconfig
app-arch/unzip
app-text/dos2unix"
# Unzip and dos2unix just for normaliz
RDEPEND="
sys-libs/gdbm
dev-libs/ntl
sci-mathematics/pari[gmp]
>=sys-libs/readline-6.1
dev-libs/libxml2:2
sci-mathematics/frobby
sci-mathematics/4ti2
sci-mathematics/nauty
=sci-mathematics/normaliz-2.10
sci-mathematics/gfan
sci-libs/mpir[cxx]
dev-libs/mpfr
sci-libs/cdd+
sci-libs/cddlib
sci-libs/lrslib[gmp]
virtual/blas
virtual/lapack
dev-util/ctags
sys-libs/ncurses
>=dev-libs/boehm-gc-7.2_alpha6[threads]
>=dev-libs/libatomic_ops-7.2_alpha6
emacs? ( virtual/emacs )"
SITEFILE=70Macaulay2-gentoo.el
S="${WORKDIR}/M2-${GITHUBTAG}/M2"
# RESTRICT="mirror"
# src_unpack (){
# unpack "Normaliz2.10.zip"
# default
# }
pkg_setup () {
tc-export CC CPP CXX
append-cppflags "-I/usr/include/frobby"
# gtest needs python:2. Setting it with python_export preserves
# the exported variables in other phases too.
python_export python2_7
}
src_prepare() {
tc-export PKG_CONFIG
# Put updated Normaliz.m2 in place
cp "${WORKDIR}/Normaliz2.10/Macaulay2/Normaliz.m2" \
"${S}/Macaulay2/packages" || die
dos2unix "${S}/Macaulay2/packages/Normaliz.m2" || die
# Patching .m2 files to look for external programs in
# /usr/bin
epatch "${FILESDIR}"/${PV}-paths-of-external-programs.patch
# Shortcircuit lapack tests
epatch "${FILESDIR}"/${PV}-lapack.patch
# NumericalAlgebraicGeometry has some non-working examples (they are
# non-reduced although that is a precondition for the used
# algorithms.) We just cut them.
pushd Macaulay2/packages/NumericalAlgebraicGeometry
epatch "${FILESDIR}"/${PV}-prune-NumAlgGeo-examples.patch
popd
# Factory, and libfac are statically linked libraries which (in this
# flavor) are not used by any other program. We build them
# internally and don't install them
mkdir "${S}/BUILD/tarfiles" || die "Creation of directory failed"
cp "${DISTDIR}/${FACTORY}.tar.gz" "${S}/BUILD/tarfiles/" \
|| die "copy failed"
cp "${DISTDIR}/factory-gftables.tar.gz" "${S}/BUILD/tarfiles/" \
|| die "copy failed"
cp "${DISTDIR}/${LIBFAC}.tar.gz" "${S}/BUILD/tarfiles/" \
|| die "copy failed"
# Macaulay2 developers want that gtest is built internally because
# the documentation says it may fail if build with options not the
# same as the tested program.
cp "${DISTDIR}/gtest-1.6.0.tar.gz" "${S}/BUILD/tarfiles/" \
|| die "copy failed"
eautoreconf
}
src_configure (){
# Recommended in bug #268064 Possibly unecessary
# but should not hurt anybody.
if ! use emacs; then
tags="ctags"
fi
# configure instead of econf to enable install with --prefix
./configure LIBS="$($(tc-getPKG_CONFIG) --libs lapack)" \
--prefix="${D}/usr" \
--disable-encap \
--disable-strip \
$(use_enable optimization optimize) \
$(use_enable debug) \
--enable-build-libraries="factory libfac" \
--with-unbuilt-programs="4ti2 gfan normaliz nauty cddplus lrslib" \
|| die "failed to configure Macaulay"
}
src_compile() {
# Parallel build not supported yet
emake -j1
if use emacs; then
cd "${S}/Macaulay2/emacs"
elisp-compile *.el
fi
}
src_test() {
# No parallel tests yet & Need to increase the time
# limit for long running tests in Schubert2 to pass
emake TLIMIT=650 -j1 check
}
src_install () {
# Parallel install not supported yet
emake -j1 install
# Remove emacs files and install them in the
# correct place if use emacs
rm -rf "${D}"/usr/share/emacs/site-lisp
if use emacs; then
cd "${S}/Macaulay2/emacs"
elisp-install ${PN} *.elc *.el
elisp-site-file-install "${FILESDIR}/${SITEFILE}"
fi
}
pkg_postinst() {
if use emacs; then
elisp-site-regen
elog "If you want to set a hot key for Macaulay2 in Emacs add a line similar to"
elog "(global-set-key [ f12 ] 'M2)"
elog "in order to set it to F12 (or choose a different one)."
fi
}
pkg_postrm() {
use emacs && elisp-site-regen
}
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-mathematics/Macaulay2: Macaulay2-1.6.ebuild ChangeLog
@ 2013-06-28 7:10 Thomas Kahle (tomka)
0 siblings, 0 replies; 4+ messages in thread
From: Thomas Kahle (tomka) @ 2013-06-28 7:10 UTC (permalink / raw
To: gentoo-commits
tomka 13/06/28 07:10:05
Modified: Macaulay2-1.6.ebuild ChangeLog
Log:
Add correct python:2.7 dep
(Portage version: 2.1.12.10/cvs/Linux x86_64, signed Manifest commit with key 0x89DEB219565C32BC!)
Revision Changes Path
1.2 sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?r1=1.1&r2=1.2
Index: Macaulay2-1.6.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- Macaulay2-1.6.ebuild 15 May 2013 07:30:43 -0000 1.1
+++ Macaulay2-1.6.ebuild 28 Jun 2013 07:10:05 -0000 1.2
@@ -1,6 +1,6 @@
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.1 2013/05/15 07:30:43 tomka Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.2 2013/06/28 07:10:05 tomka Exp $
EAPI=5
@@ -31,8 +31,10 @@
sys-process/time
virtual/pkgconfig
app-arch/unzip
- app-text/dos2unix"
+ app-text/dos2unix
+ dev-lang/python:2.7"
# Unzip and dos2unix just for normaliz
+# python2.7 necessary for gtest building
RDEPEND="
sys-libs/gdbm
@@ -62,13 +64,6 @@
S="${WORKDIR}/M2-${GITHUBTAG}/M2"
-# RESTRICT="mirror"
-
-# src_unpack (){
-# unpack "Normaliz2.10.zip"
-# default
-# }
-
pkg_setup () {
tc-export CC CPP CXX
append-cppflags "-I/usr/include/frobby"
1.29 sci-mathematics/Macaulay2/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.29&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.29&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?r1=1.28&r2=1.29
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v
retrieving revision 1.28
retrieving revision 1.29
diff -u -r1.28 -r1.29
--- ChangeLog 15 May 2013 07:30:43 -0000 1.28
+++ ChangeLog 28 Jun 2013 07:10:05 -0000 1.29
@@ -1,6 +1,9 @@
# ChangeLog for sci-mathematics/Macaulay2
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.28 2013/05/15 07:30:43 tomka Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.29 2013/06/28 07:10:05 tomka Exp $
+
+ 28 Jun 2013; Thomas Kahle <tomka@gentoo.org> Macaulay2-1.6.ebuild:
+ Add correct python:2.7 dep
*Macaulay2-1.6 (15 May 2013)
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-mathematics/Macaulay2: Macaulay2-1.6.ebuild ChangeLog
@ 2013-07-27 14:58 Thomas Kahle (tomka)
0 siblings, 0 replies; 4+ messages in thread
From: Thomas Kahle (tomka) @ 2013-07-27 14:58 UTC (permalink / raw
To: gentoo-commits
tomka 13/07/27 14:58:13
Modified: Macaulay2-1.6.ebuild ChangeLog
Log:
relax Normaliz dep
(Portage version: 2.1.12.13/cvs/Linux x86_64, signed Manifest commit with key 0x89DEB219565C32BC!)
Revision Changes Path
1.3 sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?r1=1.2&r2=1.3
Index: Macaulay2-1.6.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- Macaulay2-1.6.ebuild 28 Jun 2013 07:10:05 -0000 1.2
+++ Macaulay2-1.6.ebuild 27 Jul 2013 14:58:13 -0000 1.3
@@ -1,6 +1,6 @@
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.2 2013/06/28 07:10:05 tomka Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.3 2013/07/27 14:58:13 tomka Exp $
EAPI=5
@@ -20,7 +20,7 @@
ftp://www.mathematik.uni-kl.de/pub/Math/Singular/Factory/factory-gftables.tar.gz
http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/trunk/${FACTORY}.tar.gz
http://www.math.uiuc.edu/Macaulay2/Extra/gtest-1.6.0.tar.gz
- http://www.mathematik.uni-osnabrueck.de/normaliz/Normaliz2.10/Normaliz2.10.zip"
+ http://www.mathematik.uni-osnabrueck.de/normaliz/Normaliz2.10.1/Normaliz2.10.1.zip"
# Need normaliz for an up to date normaliz.m2
SLOT="0"
@@ -45,7 +45,7 @@
sci-mathematics/frobby
sci-mathematics/4ti2
sci-mathematics/nauty
- =sci-mathematics/normaliz-2.10
+ >=sci-mathematics/normaliz-2.10
sci-mathematics/gfan
sci-libs/mpir[cxx]
dev-libs/mpfr
1.30 sci-mathematics/Macaulay2/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.30&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.30&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?r1=1.29&r2=1.30
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v
retrieving revision 1.29
retrieving revision 1.30
diff -u -r1.29 -r1.30
--- ChangeLog 28 Jun 2013 07:10:05 -0000 1.29
+++ ChangeLog 27 Jul 2013 14:58:13 -0000 1.30
@@ -1,6 +1,9 @@
# ChangeLog for sci-mathematics/Macaulay2
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.29 2013/06/28 07:10:05 tomka Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.30 2013/07/27 14:58:13 tomka Exp $
+
+ 27 Jul 2013; Thomas Kahle <tomka@gentoo.org> Macaulay2-1.6.ebuild:
+ relax Normaliz dep
28 Jun 2013; Thomas Kahle <tomka@gentoo.org> Macaulay2-1.6.ebuild:
Add correct python:2.7 dep
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-mathematics/Macaulay2: Macaulay2-1.6.ebuild ChangeLog
@ 2014-05-03 15:44 Thomas Kahle (tomka)
0 siblings, 0 replies; 4+ messages in thread
From: Thomas Kahle (tomka) @ 2014-05-03 15:44 UTC (permalink / raw
To: gentoo-commits
tomka 14/05/03 15:44:12
Modified: Macaulay2-1.6.ebuild ChangeLog
Log:
Use python-2 for gtest (bug 509462)
(Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key 565C32BC)
Revision Changes Path
1.4 sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild?r1=1.3&r2=1.4
Index: Macaulay2-1.6.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- Macaulay2-1.6.ebuild 27 Jul 2013 14:58:13 -0000 1.3
+++ Macaulay2-1.6.ebuild 3 May 2014 15:44:12 -0000 1.4
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.3 2013/07/27 14:58:13 tomka Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/Macaulay2-1.6.ebuild,v 1.4 2014/05/03 15:44:12 tomka Exp $
EAPI=5
@@ -69,7 +69,7 @@
append-cppflags "-I/usr/include/frobby"
# gtest needs python:2. Setting it with python_export preserves
# the exported variables in other phases too.
- python_export python2_7
+ python_export python2_7 PYTHON EPYTHON
}
src_prepare() {
1.31 sci-mathematics/Macaulay2/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.31&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?rev=1.31&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog?r1=1.30&r2=1.31
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v
retrieving revision 1.30
retrieving revision 1.31
diff -u -r1.30 -r1.31
--- ChangeLog 27 Jul 2013 14:58:13 -0000 1.30
+++ ChangeLog 3 May 2014 15:44:12 -0000 1.31
@@ -1,6 +1,9 @@
# ChangeLog for sci-mathematics/Macaulay2
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.30 2013/07/27 14:58:13 tomka Exp $
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/Macaulay2/ChangeLog,v 1.31 2014/05/03 15:44:12 tomka Exp $
+
+ 03 May 2014; Thomas Kahle <tomka@gentoo.org> Macaulay2-1.6.ebuild:
+ Use python-2 for gtest (bug 509462)
27 Jul 2013; Thomas Kahle <tomka@gentoo.org> Macaulay2-1.6.ebuild:
relax Normaliz dep
^ permalink raw reply [flat|nested] 4+ messages in thread
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