From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id CC9E51381F3 for ; Fri, 26 Apr 2013 10:16:01 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 5CFC3E0A8D; Fri, 26 Apr 2013 10:16:01 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id D67C7E0A8D for ; Fri, 26 Apr 2013 10:16:00 +0000 (UTC) Received: from flycatcher.gentoo.org (flycatcher.gentoo.org [81.93.255.6]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 97BB133BE50 for ; Fri, 26 Apr 2013 10:15:59 +0000 (UTC) Received: by flycatcher.gentoo.org (Postfix, from userid 2264) id 6378C2171D; Fri, 26 Apr 2013 10:15:58 +0000 (UTC) From: "Justin Lecher (jlec)" To: gentoo-commits@lists.gentoo.org Reply-To: gentoo-dev@lists.gentoo.org, jlec@gentoo.org Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/biopython: metadata.xml ChangeLog biopython-1.61.ebuild X-VCS-Repository: gentoo-x86 X-VCS-Files: metadata.xml ChangeLog biopython-1.61.ebuild X-VCS-Directories: sci-biology/biopython X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher Content-Type: text/plain; charset=utf8 Content-Transfer-Encoding: 8bit Message-Id: <20130426101558.6378C2171D@flycatcher.gentoo.org> Date: Fri, 26 Apr 2013 10:15:58 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 9533c52b-7075-47cd-a8ed-72076afa6108 X-Archives-Hash: ae9cb5788c49a395a76d0d1dd8dd3705 jlec 13/04/26 10:15:58 Modified: metadata.xml ChangeLog Added: biopython-1.61.ebuild Log: sci-biology/biopython: Version Bump (Portage version: 2.2.0_alpha173/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916) Revision Changes Path 1.8 sci-biology/biopython/metadata.xml file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/metadata.xml?rev=1.8&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/metadata.xml?rev=1.8&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/metadata.xml?r1=1.7&r2=1.8 Index: metadata.xml =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/biopython/metadata.xml,v retrieving revision 1.7 retrieving revision 1.8 diff -u -r1.7 -r1.8 --- metadata.xml 26 Aug 2009 14:45:14 -0000 1.7 +++ metadata.xml 26 Apr 2013 10:15:58 -0000 1.8 @@ -1,5 +1,5 @@ -sci-biology + sci-biology 1.69 sci-biology/biopython/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/ChangeLog?rev=1.69&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/ChangeLog?rev=1.69&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/ChangeLog?r1=1.68&r2=1.69 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v retrieving revision 1.68 retrieving revision 1.69 diff -u -r1.68 -r1.69 --- ChangeLog 14 Dec 2012 10:00:10 -0000 1.68 +++ ChangeLog 26 Apr 2013 10:15:58 -0000 1.69 @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/biopython -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.68 2012/12/14 10:00:10 ulm Exp $ +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.69 2013/04/26 10:15:58 jlec Exp $ + +*biopython-1.61 (26 Apr 2013) + + 26 Apr 2013; Justin Lecher +biopython-1.61.ebuild, + metadata.xml: + Version Bump 14 Dec 2012; Ulrich Müller biopython-1.57.ebuild, biopython-1.58.ebuild, biopython-1.59.ebuild: 1.1 sci-biology/biopython/biopython-1.61.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/biopython-1.61.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/biopython/biopython-1.61.ebuild?rev=1.1&content-type=text/plain Index: biopython-1.61.ebuild =================================================================== # Copyright 1999-2013 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.61.ebuild,v 1.1 2013/04/26 10:15:58 jlec Exp $ EAPI=5 PYTHON_COMPAT=( python{2_6,2_7} ) inherit distutils-r1 DESCRIPTION="Python modules for computational molecular biology" HOMEPAGE="http://www.biopython.org/ http://pypi.python.org/pypi/biopython/" SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz" LICENSE="HPND" SLOT="0" KEYWORDS="~amd64 ~ppc ~x86" IUSE="mysql postgres" RDEPEND=" dev-python/matplotlib[${PYTHON_USEDEP}] dev-python/networkx[${PYTHON_USEDEP}] dev-python/numpy[${PYTHON_USEDEP}] dev-python/pygraphviz[${PYTHON_USEDEP}] dev-python/reportlab[${PYTHON_USEDEP}] media-gfx/pydot[${PYTHON_USEDEP}] mysql? ( dev-python/mysql-python[${PYTHON_USEDEP}] ) postgres? ( dev-python/psycopg[${PYTHON_USEDEP}] )" DEPEND="${RDEPEND} sys-devel/flex" #PYTHON_CFLAGS=("2.* + -fno-strict-aliasing") #DISTUTILS_USE_SEPARATE_SOURCE_DIRECTORIES="1" DOCS=( CONTRIB DEPRECATED NEWS README ) #PYTHON_MODNAME="Bio BioSQL" #PATCHES=( "${FILESDIR}"/${PN}-1.51-flex.patch ) python_test() { cd Tests ${PYTHON} run_tests.py } python_install_all() { distutils-r1_python_install_all insinto /usr/share/doc/${PF} doins -r Doc/* insinto /usr/share/${PN} cp -r --preserve=mode Scripts Tests "${ED}"/usr/share/${PN} || die }