* [gentoo-commits] gentoo-x86 commit in sci-biology/profphd: profphd-1.0.39.ebuild ChangeLog
@ 2013-03-21 9:02 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2013-03-21 9:02 UTC (permalink / raw
To: gentoo-commits
jlec 13/03/21 09:02:15
Modified: profphd-1.0.39.ebuild ChangeLog
Log:
sci-biology/profphd: Add some more PREFIX love
(Portage version: 2.2.0_alpha166/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
Revision Changes Path
1.2 sci-biology/profphd/profphd-1.0.39.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?r1=1.1&r2=1.2
Index: profphd-1.0.39.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- profphd-1.0.39.ebuild 19 Mar 2013 11:19:46 -0000 1.1
+++ profphd-1.0.39.ebuild 21 Mar 2013 09:02:15 -0000 1.2
@@ -1,6 +1,6 @@
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.1 2013/03/19 11:19:46 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.2 2013/03/21 09:02:15 jlec Exp $
EAPI=5
@@ -15,3 +15,17 @@
DEPEND="dev-lang/perl"
RDEPEND="${DEPEND}"
+
+src_prepare() {
+ sed \
+ -e '/ln -s/s:prof$:profphd:g' \
+ -i src/prof/Makefile || die
+}
+
+src_compile() {
+ emake prefix="${EPREFIX}/usr"
+}
+
+src_install() {
+ emake prefix="${EPREFIX}/usr" DESTDIR="${D}" install
+}
1.2 sci-biology/profphd/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?r1=1.1&r2=1.2
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- ChangeLog 19 Mar 2013 11:19:46 -0000 1.1
+++ ChangeLog 21 Mar 2013 09:02:15 -0000 1.2
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/profphd
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.1 2013/03/19 11:19:46 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.2 2013/03/21 09:02:15 jlec Exp $
+
+ 21 Mar 2013; Justin Lecher <jlec@gentoo.org> profphd-1.0.39.ebuild:
+ Add some more PREFIX love
*profphd-1.0.39 (19 Mar 2013)
^ permalink raw reply [flat|nested] 2+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/profphd: profphd-1.0.39.ebuild ChangeLog
@ 2013-04-24 14:28 Justin Lecher (jlec)
0 siblings, 0 replies; 2+ messages in thread
From: Justin Lecher (jlec) @ 2013-04-24 14:28 UTC (permalink / raw
To: gentoo-commits
jlec 13/04/24 14:28:05
Modified: profphd-1.0.39.ebuild ChangeLog
Log:
sci-biology/profphd: Updated deps
(Portage version: 2.2.0_alpha173/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
Revision Changes Path
1.3 sci-biology/profphd/profphd-1.0.39.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?r1=1.2&r2=1.3
Index: profphd-1.0.39.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- profphd-1.0.39.ebuild 21 Mar 2013 09:02:15 -0000 1.2
+++ profphd-1.0.39.ebuild 24 Apr 2013 14:28:05 -0000 1.3
@@ -1,12 +1,12 @@
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.2 2013/03/21 09:02:15 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.3 2013/04/24 14:28:05 jlec Exp $
EAPI=5
DESCRIPTION="Secondary structure and solvent accessibility predictor"
HOMEPAGE="https://rostlab.org/owiki/index.php/PROFphd_-_Secondary_Structure,_Solvent_Accessibility_and_Transmembrane_Helices_Prediction"
-SRC_URI="mirror://debian/pool/main/p/${PN}/${PN}_${PV}.orig.tar.xz"
+SRC_URI="ftp://rostlab.org/profphd/${P}.tar.xz"
SLOT="0"
LICENSE="GPL-2"
@@ -14,7 +14,11 @@
IUSE=""
DEPEND="dev-lang/perl"
-RDEPEND="${DEPEND}"
+RDEPEND="${DEPEND}
+ dev-perl/librg-utils-perl
+ sci-libs/profnet
+ sci-libs/profphd-utils
+"
src_prepare() {
sed \
1.3 sci-biology/profphd/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.3&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.3&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?r1=1.2&r2=1.3
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- ChangeLog 21 Mar 2013 09:02:15 -0000 1.2
+++ ChangeLog 24 Apr 2013 14:28:05 -0000 1.3
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/profphd
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.2 2013/03/21 09:02:15 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.3 2013/04/24 14:28:05 jlec Exp $
+
+ 24 Apr 2013; Justin Lecher <jlec@gentoo.org> profphd-1.0.39.ebuild:
+ Updated deps
21 Mar 2013; Justin Lecher <jlec@gentoo.org> profphd-1.0.39.ebuild:
Add some more PREFIX love
^ permalink raw reply [flat|nested] 2+ messages in thread
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