* [gentoo-commits] gentoo-x86 commit in sci-chemistry/psi: ChangeLog psi-3.4.0-r2.ebuild
@ 2011-04-25 15:49 Justin Lecher (jlec)
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher (jlec) @ 2011-04-25 15:49 UTC (permalink / raw
To: gentoo-commits
jlec 11/04/25 15:49:30
Modified: ChangeLog
Added: psi-3.4.0-r2.ebuild
Log:
_FORTIFY_SOURCE indicates presence of overflow Fix, #341715
(Portage version: 2.2.0_alpha30/cvs/Linux x86_64)
Revision Changes Path
1.14 sci-chemistry/psi/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.14&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.14&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?r1=1.13&r2=1.14
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v
retrieving revision 1.13
retrieving revision 1.14
diff -u -r1.13 -r1.14
--- ChangeLog 6 Jul 2010 11:36:22 -0000 1.13
+++ ChangeLog 25 Apr 2011 15:49:30 -0000 1.14
@@ -1,6 +1,12 @@
# ChangeLog for sci-chemistry/psi
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.13 2010/07/06 11:36:22 jlec Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.14 2011/04/25 15:49:30 jlec Exp $
+
+*psi-3.4.0-r2 (25 Apr 2011)
+
+ 25 Apr 2011; Justin Lecher <jlec@gentoo.org> +files/3.4.0-fortify.patch,
+ +psi-3.4.0-r2.ebuild:
+ _FORTIFY_SOURCE indicates presence of overflow Fix, #341715
*psi-3.4.0-r1 (06 Jul 2010)
1.1 sci-chemistry/psi/psi-3.4.0-r2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.1&content-type=text/plain
Index: psi-3.4.0-r2.ebuild
===================================================================
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.1 2011/04/25 15:49:30 jlec Exp $
EAPI="3"
inherit autotools eutils
DESCRIPTION="Suite of ab initio quantum chemistry programs to compute various molecular properties"
HOMEPAGE="http://www.psicode.org/"
SRC_URI="mirror://sourceforge/psicode/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="test"
# File collision, see bug #249423
RDEPEND="
!sci-visualization/extrema
virtual/blas
virtual/lapack
>=sci-libs/libint-1.1.4"
DEPEND="${RDEPEND}
test? ( dev-lang/perl )"
S="${WORKDIR}/${PN}${PV:0:1}"
src_prepare() {
epatch "${FILESDIR}"/${PV}-dont-build-libint.patch \
"${FILESDIR}"/use-external-libint.patch \
"${FILESDIR}"/${PV}-gcc-4.3.patch \
"${FILESDIR}"/${PV}-destdir.patch \
"${FILESDIR}"/${P}-parallel-make.patch \
"${FILESDIR}"/${PV}-man_paths.patch \
"${FILESDIR}"/${PV}-ldflags.patch \
"${FILESDIR}"/${PV}-parallel_fix.patch \
"${FILESDIR}"/${PV}-fortify.patch
# Broken test
sed \
-e 's:scf-mvd-opt ::g' \
-e 's:scf-mvd-opt-puream ::g' \
-i tests/Makefile.in || die
sed \
-e "/LIBPATTERNS/d" \
-i src/{bin,util,samples}/MakeVars.in || die
eautoreconf
}
src_configure() {
# This variable gets set sometimes to /usr/lib/src and breaks stuff
unset CLIBS
econf \
--with-opt="${CXXFLAGS}" \
--datadir="${EPREFIX}"/usr/share/${PN} \
--with-blas="$(pkg-config blas --libs)"
}
src_compile() {
emake SCRATCH="${WORKDIR}/libint" DODEPEND="no" || die
}
src_test() {
emake EXECDIR="${S}"/bin TESTFLAGS="" -j1 tests || die
}
src_install() {
emake DESTDIR="${D}" DODEPEND="no" install || die
}
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-chemistry/psi: ChangeLog psi-3.4.0-r2.ebuild
@ 2011-12-16 15:17 Justin Lecher (jlec)
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher (jlec) @ 2011-12-16 15:17 UTC (permalink / raw
To: gentoo-commits
jlec 11/12/16 15:17:14
Modified: ChangeLog psi-3.4.0-r2.ebuild
Log:
Moved to autotoolutils.eclass, fixed detection of lapack
(Portage version: 2.2.0_alpha81/cvs/Linux x86_64)
Revision Changes Path
1.17 sci-chemistry/psi/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.17&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.17&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?r1=1.16&r2=1.17
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -r1.16 -r1.17
--- ChangeLog 21 Jun 2011 15:58:04 -0000 1.16
+++ ChangeLog 16 Dec 2011 15:17:14 -0000 1.17
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/psi
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.16 2011/06/21 15:58:04 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.17 2011/12/16 15:17:14 jlec Exp $
+
+ 16 Dec 2011; Justin Lecher <jlec@gentoo.org> psi-3.4.0-r2.ebuild:
+ Moved to autotoolutils.eclass, fixed detection of lapack
21 Jun 2011; Justin Lecher <jlec@gentoo.org> psi-3.2.3.ebuild,
psi-3.3.0.ebuild, psi-3.4.0-r1.ebuild, psi-3.4.0-r2.ebuild:
1.4 sci-chemistry/psi/psi-3.4.0-r2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?r1=1.3&r2=1.4
Index: psi-3.4.0-r2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- psi-3.4.0-r2.ebuild 21 Jun 2011 15:58:04 -0000 1.3
+++ psi-3.4.0-r2.ebuild 16 Dec 2011 15:17:14 -0000 1.4
@@ -1,10 +1,10 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.3 2011/06/21 15:58:04 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.4 2011/12/16 15:17:14 jlec Exp $
-EAPI="3"
+EAPI=4
-inherit autotools fortran-2 eutils
+inherit autotools-utils fortran-2 multilib
DESCRIPTION="Suite of ab initio quantum chemistry programs to compute various molecular properties"
HOMEPAGE="http://www.psicode.org/"
@@ -13,9 +13,8 @@
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE="test"
+IUSE="static-libs test"
-# File collision, see bug #249423
RDEPEND="
virtual/fortran
@@ -28,17 +27,20 @@
S="${WORKDIR}/${PN}${PV:0:1}"
-src_prepare() {
- epatch "${FILESDIR}"/${PV}-dont-build-libint.patch \
- "${FILESDIR}"/use-external-libint.patch \
- "${FILESDIR}"/${PV}-gcc-4.3.patch \
- "${FILESDIR}"/${PV}-destdir.patch \
- "${FILESDIR}"/${P}-parallel-make.patch \
- "${FILESDIR}"/${PV}-man_paths.patch \
- "${FILESDIR}"/${PV}-ldflags.patch \
- "${FILESDIR}"/${PV}-parallel_fix.patch \
- "${FILESDIR}"/${PV}-fortify.patch
+PATCHES=(
+ "${FILESDIR}"/${PV}-dont-build-libint.patch
+ "${FILESDIR}"/use-external-libint.patch
+ "${FILESDIR}"/${PV}-gcc-4.3.patch
+ "${FILESDIR}"/${PV}-destdir.patch
+ "${FILESDIR}"/${P}-parallel-make.patch
+ "${FILESDIR}"/${PV}-man_paths.patch
+ "${FILESDIR}"/${PV}-ldflags.patch
+ "${FILESDIR}"/${PV}-parallel_fix.patch
+ "${FILESDIR}"/${PV}-fortify.patch
+ )
+src_prepare() {
+ autotools-utils_src_prepare
# Broken test
sed \
-e 's:scf-mvd-opt ::g' \
@@ -55,14 +57,17 @@
# This variable gets set sometimes to /usr/lib/src and breaks stuff
unset CLIBS
- econf \
- --with-opt="${CXXFLAGS}" \
- --datadir="${EPREFIX}"/usr/share/${PN} \
+ local myeconfargs=(
+ --with-opt="${CXXFLAGS}"
+ --datadir="${EPREFIX}"/usr/share/${PN}
--with-blas="$(pkg-config blas --libs)"
+ --with-lapack="$(pkg-config --libs lapack)"
+ )
+ autotools-utils_src_configure
}
src_compile() {
- emake SCRATCH="${WORKDIR}/libint" DODEPEND="no" || die
+ autotools-utils_src_compile SCRATCH="${WORKDIR}/libint" DODEPEND="no"
}
src_test() {
@@ -70,5 +75,8 @@
}
src_install() {
- emake DESTDIR="${D}" DODEPEND="no" install || die
+ autotools-utils_src_install DODEPEND="no"
+ if ! use static-libs; then
+ rm -f "${ED}"/usr/$(get_libdir)/*.a || die
+ fi
}
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-chemistry/psi: ChangeLog psi-3.4.0-r2.ebuild
@ 2011-12-21 8:26 PaweA Hajdan (phajdan.jr)
0 siblings, 0 replies; 4+ messages in thread
From: PaweA Hajdan (phajdan.jr) @ 2011-12-21 8:26 UTC (permalink / raw
To: gentoo-commits
phajdan.jr 11/12/21 08:26:56
Modified: ChangeLog psi-3.4.0-r2.ebuild
Log:
x86 stable wrt bug #393873
(Portage version: 2.1.10.41/cvs/Linux i686)
Revision Changes Path
1.19 sci-chemistry/psi/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.19&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.19&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?r1=1.18&r2=1.19
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v
retrieving revision 1.18
retrieving revision 1.19
diff -u -r1.18 -r1.19
--- ChangeLog 16 Dec 2011 16:26:35 -0000 1.18
+++ ChangeLog 21 Dec 2011 08:26:56 -0000 1.19
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/psi
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.18 2011/12/16 16:26:35 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.19 2011/12/21 08:26:56 phajdan.jr Exp $
+
+ 21 Dec 2011; Pawel Hajdan jr <phajdan.jr@gentoo.org> psi-3.4.0-r2.ebuild:
+ x86 stable wrt bug #393873
16 Dec 2011; Agostino Sarubbo <ago@gentoo.org> psi-3.4.0-r2.ebuild:
Stable for AMD64, wrt bug #393873
1.6 sci-chemistry/psi/psi-3.4.0-r2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.6&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.6&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?r1=1.5&r2=1.6
Index: psi-3.4.0-r2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- psi-3.4.0-r2.ebuild 16 Dec 2011 16:26:35 -0000 1.5
+++ psi-3.4.0-r2.ebuild 21 Dec 2011 08:26:56 -0000 1.6
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.5 2011/12/16 16:26:35 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.6 2011/12/21 08:26:56 phajdan.jr Exp $
EAPI=4
@@ -12,7 +12,7 @@
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="amd64 ~x86"
+KEYWORDS="amd64 x86"
IUSE="static-libs test"
RDEPEND="
^ permalink raw reply [flat|nested] 4+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-chemistry/psi: ChangeLog psi-3.4.0-r2.ebuild
@ 2013-02-19 16:31 Justin Lecher (jlec)
0 siblings, 0 replies; 4+ messages in thread
From: Justin Lecher (jlec) @ 2013-02-19 16:31 UTC (permalink / raw
To: gentoo-commits
jlec 13/02/19 16:31:05
Modified: ChangeLog psi-3.4.0-r2.ebuild
Log:
sci-chemistry/psi: Add missing dep on virtual/pkgconfig
(Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Revision Changes Path
1.23 sci-chemistry/psi/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.23&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?rev=1.23&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/ChangeLog?r1=1.22&r2=1.23
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v
retrieving revision 1.22
retrieving revision 1.23
diff -u -r1.22 -r1.23
--- ChangeLog 19 Feb 2013 16:30:03 -0000 1.22
+++ ChangeLog 19 Feb 2013 16:31:05 -0000 1.23
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/psi
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.22 2013/02/19 16:30:03 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.23 2013/02/19 16:31:05 jlec Exp $
+
+ 19 Feb 2013; Justin Lecher <jlec@gentoo.org> psi-3.4.0-r2.ebuild:
+ Add missing dep on virtual/pkgconfig
19 Feb 2013; Justin Lecher <jlec@gentoo.org>
-files/psi-3.3.0-parallel-make.patch, psi-3.4.0-r2.ebuild,
1.9 sci-chemistry/psi/psi-3.4.0-r2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.9&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?rev=1.9&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild?r1=1.8&r2=1.9
Index: psi-3.4.0-r2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -r1.8 -r1.9
--- psi-3.4.0-r2.ebuild 19 Feb 2013 16:30:03 -0000 1.8
+++ psi-3.4.0-r2.ebuild 19 Feb 2013 16:31:05 -0000 1.9
@@ -1,6 +1,6 @@
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.8 2013/02/19 16:30:03 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/psi-3.4.0-r2.ebuild,v 1.9 2013/02/19 16:31:05 jlec Exp $
EAPI=4
@@ -21,6 +21,7 @@
virtual/lapack
>=sci-libs/libint-1.1.4"
DEPEND="${RDEPEND}
+ virtual/pkgconfig
test? ( dev-lang/perl )"
S="${WORKDIR}/${PN}${PV:0:1}"
^ permalink raw reply [flat|nested] 4+ messages in thread
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2011-12-21 8:26 PaweA Hajdan (phajdan.jr)
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