[gentoo-commits] gentoo-x86 commit in sci-biology/readseq: readseq-20080420.ebuild ChangeLog metadata.xml readseq-19930201-r1.ebuild readseq-19930201.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/readseq: readseq-20080420.ebuild ChangeLog metadata.xml readseq-19930201-r1.ebuild readseq-19930201.ebuild

[Justin Lecher (jlec)]

jlec        13/02/01 14:55:18

  Modified:             readseq-20080420.ebuild ChangeLog metadata.xml
  Removed:              readseq-19930201-r1.ebuild readseq-19930201.ebuild
  Log:
  sci-biology/readseq: Drop old; Resolve file collision sci-biology/meme, #455010
  
  (Portage version: 2.2.0_alpha161/cvs/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

Revision  Changes    Path
1.4                  sci-biology/readseq/readseq-20080420.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild?r1=1.3&r2=1.4

Index: readseq-20080420.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- readseq-20080420.ebuild	16 Jul 2008 17:00:20 -0000	1.3
+++ readseq-20080420.ebuild	1 Feb 2013 14:55:17 -0000	1.4
@@ -1,6 +1,6 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2013 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild,v 1.3 2008/07/16 17:00:20 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/readseq-20080420.ebuild,v 1.4 2013/02/01 14:55:17 jlec Exp $
 
 EAPI=1
 
@@ -14,13 +14,17 @@
 # Renamed to the date of the modification and mirrored
 SRC_URI="http://dev.gentoo.org/~dberkholz/distfiles/${MY_P}.zip"
 #SRC_URI="mirror://gentoo/${MY_P}.zip"
+
 LICENSE="public-domain"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""
-COMMON="dev-java/xerces:2
-	dev-java/jaxp"
+
+COMMON="
+	dev-java/jaxp
+	dev-java/xerces:2"
 RDEPEND="${COMMON}
+	!=sci-biology/meme-4.8.1
 	>=virtual/jre-1.4"
 DEPEND="${COMMON}
 	>=virtual/jdk-1.4



1.10                 sci-biology/readseq/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/ChangeLog?rev=1.10&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/ChangeLog?rev=1.10&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/ChangeLog?r1=1.9&r2=1.10

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/readseq/ChangeLog,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -r1.9 -r1.10
--- ChangeLog	28 Nov 2010 08:56:48 -0000	1.9
+++ ChangeLog	1 Feb 2013 14:55:17 -0000	1.10
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/readseq
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/ChangeLog,v 1.9 2010/11/28 08:56:48 jlec Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/ChangeLog,v 1.10 2013/02/01 14:55:17 jlec Exp $
+
+  01 Feb 2013; Justin Lecher <jlec@gentoo.org> -readseq-19930201.ebuild,
+  -readseq-19930201-r1.ebuild, readseq-20080420.ebuild, metadata.xml:
+  Drop old; Resolve file collision sci-biology/meme, #455010
 
 *readseq-19930201-r1 (28 Nov 2010)
 



1.4                  sci-biology/readseq/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/metadata.xml?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/metadata.xml?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/readseq/metadata.xml?r1=1.3&r2=1.4

Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/readseq/metadata.xml,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- metadata.xml	24 Mar 2009 21:21:41 -0000	1.3
+++ metadata.xml	1 Feb 2013 14:55:17 -0000	1.4
@@ -1,8 +1,8 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<herd>sci-biology</herd>
-	<longdescription>
+  <herd>sci-biology</herd>
+  <longdescription>
 		Reads and writes nucleic/protein sequences in various formats. Data
 		files may have multiple sequences.
 	</longdescription>