[gentoo-commits] gentoo-x86 commit in sci-biology/maqview: metadata.xml ChangeLog maqview-0.2.5-r2.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/maqview: metadata.xml ChangeLog maqview-0.2.5-r2.ebuild

[Justin Lecher (jlec)]

jlec        13/01/23 12:15:56

  Modified:             metadata.xml ChangeLog
  Added:                maqview-0.2.5-r2.ebuild
  Log:
  sci-biology/maqview: Fix compilation with gcc-4.7, #451438
  
  (Portage version: 2.2.0_alpha159/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)

Revision  Changes    Path
1.2                  sci-biology/maqview/metadata.xml

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/metadata.xml?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/metadata.xml?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/metadata.xml?r1=1.1&r2=1.2

Index: metadata.xml
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/maqview/metadata.xml,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- metadata.xml	26 Feb 2009 18:22:42 -0000	1.1
+++ metadata.xml	23 Jan 2013 12:15:56 -0000	1.2
@@ -1,9 +1,9 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<maintainer>
-		<email>weaver@gentoo.org</email>
-		<name>Andrey Kislyuk</name>
-	</maintainer>
-	<herd>sci-biology</herd>
+  <maintainer>
+    <email>weaver@gentoo.org</email>
+    <name>Andrey Kislyuk</name>
+  </maintainer>
+  <herd>sci-biology</herd>
 </pkgmetadata>



1.7                  sci-biology/maqview/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/ChangeLog?rev=1.7&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/ChangeLog?rev=1.7&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/ChangeLog?r1=1.6&r2=1.7

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/maqview/ChangeLog,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -r1.6 -r1.7
--- ChangeLog	11 May 2011 19:19:47 -0000	1.6
+++ ChangeLog	23 Jan 2013 12:15:56 -0000	1.7
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/maqview
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/maqview/ChangeLog,v 1.6 2011/05/11 19:19:47 angelos Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/maqview/ChangeLog,v 1.7 2013/01/23 12:15:56 jlec Exp $
+
+*maqview-0.2.5-r2 (23 Jan 2013)
+
+  23 Jan 2013; Justin Lecher <jlec@gentoo.org> +maqview-0.2.5-r2.ebuild,
+  +files/maqview-0.2.5-gcc4.7.patch, metadata.xml:
+  Fix compilation with gcc-4.7, #451438
 
   11 May 2011; Christoph Mende <angelos@gentoo.org> maqview-0.2.5-r1.ebuild:
   Stable on amd64 wrt bug #298094



1.1                  sci-biology/maqview/maqview-0.2.5-r2.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/maqview-0.2.5-r2.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/maqview/maqview-0.2.5-r2.ebuild?rev=1.1&content-type=text/plain

Index: maqview-0.2.5-r2.ebuild
===================================================================
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/maqview/maqview-0.2.5-r2.ebuild,v 1.1 2013/01/23 12:15:56 jlec Exp $

EAPI=5

AUTOTOOLS_AUTORECONF=true

inherit autotools-utils

DESCRIPTION="GUI for sci-biology/maq, a short read mapping assembler"
HOMEPAGE="http://maq.sourceforge.net/"
SRC_URI="mirror://sourceforge/maq/${P}.tar.gz"

LICENSE="GPL-3"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"

DEPEND="
	media-libs/freeglut
	sys-libs/zlib"
RDEPEND="${DEPEND}
	sci-biology/maq"

S="${WORKDIR}/${PN}"

PATCHES=(
	"${FILESDIR}"/${PV}-ldflags.patch
	"${FILESDIR}"/${PV}-zlib.patch
	"${FILESDIR}"/${P}-gcc4.7.patch
	)