[gentoo-commits] gentoo-x86 commit in sci-libs/hdf5/files: hdf5-1.8.10-buildsystem.patch hdf5-1.8.10-implicits.patch

[gentoo-commits] gentoo-x86 commit in sci-libs/hdf5/files: hdf5-1.8.10-buildsystem.patch hdf5-1.8.10-implicits.patch

[Kacper Kowalik (xarthisius)]

xarthisius    12/11/06 19:56:41

  Added:                hdf5-1.8.10-buildsystem.patch
                        hdf5-1.8.10-implicits.patch
  Log:
  Version bump
  
  (Portage version: 2.2.0_alpha138/cvs/Linux x86_64, signed Manifest commit with key 0x5D21B852895192F9)

Revision  Changes    Path
1.1                  sci-libs/hdf5/files/hdf5-1.8.10-buildsystem.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/hdf5/files/hdf5-1.8.10-buildsystem.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/hdf5/files/hdf5-1.8.10-buildsystem.patch?rev=1.1&content-type=text/plain

Index: hdf5-1.8.10-buildsystem.patch
===================================================================
Prevent build system with messing up LD_LIBRARY_PATH

--- a/configure.ac
+++ b/configure.ac
@@ -2331,8 +2331,6 @@ AC_TRY_COMPILE(,[
 ##
 AC_MSG_CHECKING([how to print long long])
 AC_CACHE_VAL([hdf5_cv_printf_ll], [
-LD_LIBRARY_PATH="$LD_LIBRARY_PATH`echo $AM_LDFLAGS $LDFLAGS | sed -e 's/-L/:/g' -e 's/ //g'`"
-export LD_LIBRARY_PATH
 
 for hdf5_cv_printf_ll in l ll L q unknown; do
    AC_TRY_RUN([
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -125,8 +125,6 @@ settings_DATA=libhdf5.settings
 # Remove the generated .c file if errors occur unless HDF5_Make_Ignore
 # is set to ignore the error.
 H5Tinit.c: H5detect$(EXEEXT)
-	LD_LIBRARY_PATH="$$LD_LIBRARY_PATH`echo $(LDFLAGS) |                  \
-		sed -e 's/-L/:/g' -e 's/ //g'`"                               \
 	$(RUNSERIAL) ./H5detect$(EXEEXT) > $@  ||                               \
 	    (test $$HDF5_Make_Ignore && echo "*** Error ignored") ||          \
 	    ($(RM) $@ ; exit 1)
@@ -137,8 +135,6 @@ H5Tinit.c: H5detect$(EXEEXT)
 # Remove the generated .c file if errors occur unless HDF5_Make_Ignore
 # is set to ignore the error.
 H5lib_settings.c: H5make_libsettings$(EXEEXT) libhdf5.settings
-	LD_LIBRARY_PATH="$$LD_LIBRARY_PATH`echo $(LDFLAGS) |                  \
-		sed -e 's/-L/:/g' -e 's/ //g'`"                               \
 	$(RUNSERIAL) ./H5make_libsettings$(EXEEXT) > $@  ||                               \
 	    (test $$HDF5_Make_Ignore && echo "*** Error ignored") ||          \
 	    ($(RM) $@ ; exit 1)



1.1                  sci-libs/hdf5/files/hdf5-1.8.10-implicits.patch

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/hdf5/files/hdf5-1.8.10-implicits.patch?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-libs/hdf5/files/hdf5-1.8.10-implicits.patch?rev=1.1&content-type=text/plain

Index: hdf5-1.8.10-implicits.patch
===================================================================
--- a/configure.ac
+++ b/configure.ac
@@ -1494,6 +1494,9 @@ case "$host_cpu-$host_vendor-$host_os" in
     ## however, we do not do this since it breaks the big test on some 
     ## older platforms.
     AM_CPPFLAGS="-D_BSD_SOURCE $AM_CPPFLAGS"
+
+    dnl _GNU_SOURCE is needed for vasprintf
+    AM_CPPFLAGS="-D_GNU_SOURCE $AM_CPPFLAGS"
     ;;
 esac
 
--- a/hl/src/H5LTanalyze.c
+++ b/hl/src/H5LTanalyze.c
@@ -49,6 +49,7 @@
 #define YY_FLEX_MINOR_VERSION 5
 
 #include <stdio.h>
+#include "H5pubconf.h"
 #ifdef H5_HAVE_UNISTD_H
 #include <unistd.h>
 #endif
--- a/test/cache_common.h
+++ b/test/cache_common.h
@@ -702,5 +702,9 @@ void validate_mdc_config(hid_t file_id,
                          hbool_t compare_init,
                          int test_num);
 
+hbool_t resize_configs_are_equal(const H5C_auto_size_ctl_t *a,
+                                 const H5C_auto_size_ctl_t *b,
+                                 hbool_t compare_init);
+
 #endif /* _CACHE_COMMON_H */
 
--- a/tools/h5repack/testh5repack_detect_szip.c
+++ b/tools/h5repack/testh5repack_detect_szip.c
@@ -18,6 +18,7 @@
 #include "h5tools.h"
 #include "h5tools_utils.h"
 #include "h5test.h"
+#include "h5tools_utils.h"
 
 
 /* Name of tool */
--- a/tools/misc/talign.c
+++ b/tools/misc/talign.c
@@ -23,6 +23,7 @@
 
 #include "hdf5.h"
 #include "H5private.h"
+#include "h5tools.h"
 
 const char *fname = "talign.h5";
 const char *setname = "align";