[gentoo-commits] gentoo-x86 commit in sci-biology/gmap: gmap-2012.07.20.ebuild ChangeLog gmap-2011.03.28.ebuild gmap-2010.07.27.ebuild gmap-2011.09.14.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/gmap: gmap-2012.07.20.ebuild ChangeLog gmap-2011.03.28.ebuild gmap-2010.07.27.ebuild gmap-2011.09.14.ebuild

[Andrey Kislyuk (weaver)]

weaver      12/10/05 16:50:34

  Modified:             ChangeLog
  Added:                gmap-2012.07.20.ebuild
  Removed:              gmap-2011.03.28.ebuild gmap-2010.07.27.ebuild
                        gmap-2011.09.14.ebuild
  Log:
  Version bump, remove old
  
  (Portage version: 2.2.0_alpha134/cvs/Linux x86_64)

Revision  Changes    Path
1.12                 sci-biology/gmap/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/gmap/ChangeLog?rev=1.12&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/gmap/ChangeLog?rev=1.12&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/gmap/ChangeLog?r1=1.11&r2=1.12

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/gmap/ChangeLog,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -r1.11 -r1.12
--- ChangeLog	8 Oct 2011 22:39:22 -0000	1.11
+++ ChangeLog	5 Oct 2012 16:50:34 -0000	1.12
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/gmap
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/gmap/ChangeLog,v 1.11 2011/10/08 22:39:22 weaver Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/gmap/ChangeLog,v 1.12 2012/10/05 16:50:34 weaver Exp $
+
+*gmap-2012.07.20 (05 Oct 2012)
+
+  05 Oct 2012; Andrey Kislyuk <weaver@gentoo.org> -gmap-2010.07.27.ebuild,
+  -gmap-2011.03.28.ebuild, -gmap-2011.09.14.ebuild, +gmap-2012.07.20.ebuild:
+  Version bump, remove old
 
 *gmap-2011.10.07 (08 Oct 2011)
 



1.1                  sci-biology/gmap/gmap-2012.07.20.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/gmap/gmap-2012.07.20.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/gmap/gmap-2012.07.20.ebuild?rev=1.1&content-type=text/plain

Index: gmap-2012.07.20.ebuild
===================================================================
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/gmap/gmap-2012.07.20.ebuild,v 1.1 2012/10/05 16:50:34 weaver Exp $

EAPI=4

MY_PV=${PV//./-}

DESCRIPTION="A Genomic Mapping and Alignment Program for mRNA and EST Sequences"
HOMEPAGE="http://research-pub.gene.com/gmap/"
SRC_URI="http://research-pub.gene.com/gmap/src/gmap-gsnap-${MY_PV}.tar.gz"

LICENSE="gmap"
SLOT="0"
IUSE="+samtools +goby"
KEYWORDS="~amd64 ~x86"

DEPEND="samtools? ( sci-biology/samtools )
	goby? ( sci-biology/goby-cpp )"
RDEPEND="${DEPEND}"

S="${WORKDIR}/gmap-${MY_PV}"

src_configure() {
	econf $(use_with samtools) \
		$(use_with goby goby /usr)
}

src_install() {
	einstall || die
	dodoc AUTHORS ChangeLog README
}

src_test() {
	emake check || die
}