* [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild
@ 2010-01-01 21:44 Christian Faulhammer (fauli)
0 siblings, 0 replies; 5+ messages in thread
From: Christian Faulhammer (fauli) @ 2010-01-01 21:44 UTC (permalink / raw
To: gentoo-commits
fauli 10/01/01 21:44:45
Modified: ChangeLog tree-puzzle-5.2.ebuild
Log:
Transfer Prefix keywords
(Portage version: 2.1.6.13/cvs/Linux i686)
Revision Changes Path
1.15 sci-biology/tree-puzzle/ChangeLog
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.15&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.15&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?r1=1.14&r2=1.15
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v
retrieving revision 1.14
retrieving revision 1.15
diff -u -r1.14 -r1.15
--- ChangeLog 24 Mar 2009 21:11:00 -0000 1.14
+++ ChangeLog 1 Jan 2010 21:44:45 -0000 1.15
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/tree-puzzle
-# Copyright 2000-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.14 2009/03/24 21:11:00 ribosome Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.15 2010/01/01 21:44:45 fauli Exp $
+
+ 01 Jan 2010; Christian Faulhammer <fauli@gentoo.org>
+ tree-puzzle-5.2.ebuild:
+ Transfer Prefix keywords
24 Mar 2009; Olivier Fisette <ribosome@gentoo.org> metadata.xml:
Giving up maintainership of this package.
1.10 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.10&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.10&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?r1=1.9&r2=1.10
Index: tree-puzzle-5.2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -r1.9 -r1.10
--- tree-puzzle-5.2.ebuild 7 Feb 2008 14:41:06 -0000 1.9
+++ tree-puzzle-5.2.ebuild 1 Jan 2010 21:44:45 -0000 1.10
@@ -1,6 +1,6 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.9 2008/02/07 14:41:06 grobian Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.10 2010/01/01 21:44:45 fauli Exp $
inherit toolchain-funcs
@@ -10,7 +10,7 @@
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~ppc x86"
+KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
DEPEND="mpi? ( sys-cluster/lam-mpi )"
^ permalink raw reply [flat|nested] 5+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild
@ 2012-04-26 16:06 Justin Lecher (jlec)
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher (jlec) @ 2012-04-26 16:06 UTC (permalink / raw
To: gentoo-commits
jlec 12/04/26 16:06:44
Modified: ChangeLog tree-puzzle-5.2.ebuild
Log:
sci-biology/tree-puzzle: Move to EAPI=4
(Portage version: 2.2.0_alpha101/cvs/Linux x86_64)
Revision Changes Path
1.16 sci-biology/tree-puzzle/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.16&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.16&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?r1=1.15&r2=1.16
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -r1.15 -r1.16
--- ChangeLog 1 Jan 2010 21:44:45 -0000 1.15
+++ ChangeLog 26 Apr 2012 16:06:44 -0000 1.16
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/tree-puzzle
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.15 2010/01/01 21:44:45 fauli Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.16 2012/04/26 16:06:44 jlec Exp $
+
+ 26 Apr 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
+ Move to EAPI=4
01 Jan 2010; Christian Faulhammer <fauli@gentoo.org>
tree-puzzle-5.2.ebuild:
1.11 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.11&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.11&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?r1=1.10&r2=1.11
Index: tree-puzzle-5.2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -r1.10 -r1.11
--- tree-puzzle-5.2.ebuild 1 Jan 2010 21:44:45 -0000 1.10
+++ tree-puzzle-5.2.ebuild 26 Apr 2012 16:06:44 -0000 1.11
@@ -1,19 +1,22 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.10 2010/01/01 21:44:45 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.11 2012/04/26 16:06:44 jlec Exp $
+
+EAPI=4
inherit toolchain-funcs
-DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data."
+DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data"
HOMEPAGE="http://www.tree-puzzle.de"
SRC_URI="http://www.tree-puzzle.de/${P}.tar.gz"
-LICENSE="GPL-2"
+LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
DEPEND="mpi? ( sys-cluster/lam-mpi )"
+RDEPEND="${DEPEND}"
pkg_setup () {
use mpi && [ $(tc-getCC) = icc ] && die "The parallelized version of tree-puzzle cannot be compiled using icc.
@@ -21,16 +24,15 @@
version of the program, or use gcc as your compiler (CC=\"gcc\")."
}
-src_compile() {
- econf || die
- cd ${S}/src
+src_prepare() {
if ! use mpi; then
- sed -e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
- -e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
- -i Makefile || die
+ cd ${S}/src
+ sed \
+ -e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
+ -e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
+ -i Makefile || die
+ cd ${S}
fi
- cd ${S}
- emake || die
}
src_install() {
^ permalink raw reply [flat|nested] 5+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild
@ 2012-04-26 16:08 Justin Lecher (jlec)
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher (jlec) @ 2012-04-26 16:08 UTC (permalink / raw
To: gentoo-commits
jlec 12/04/26 16:08:36
Modified: ChangeLog tree-puzzle-5.2.ebuild
Log:
sci-biology/tree-puzzle: Add missing quotes
(Portage version: 2.2.0_alpha101/cvs/Linux x86_64)
Revision Changes Path
1.17 sci-biology/tree-puzzle/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.17&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.17&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?r1=1.16&r2=1.17
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -r1.16 -r1.17
--- ChangeLog 26 Apr 2012 16:06:44 -0000 1.16
+++ ChangeLog 26 Apr 2012 16:08:36 -0000 1.17
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/tree-puzzle
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.16 2012/04/26 16:06:44 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.17 2012/04/26 16:08:36 jlec Exp $
+
+ 26 Apr 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
+ Add missing quotes
26 Apr 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
Move to EAPI=4
1.12 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.12&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.12&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?r1=1.11&r2=1.12
Index: tree-puzzle-5.2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -r1.11 -r1.12
--- tree-puzzle-5.2.ebuild 26 Apr 2012 16:06:44 -0000 1.11
+++ tree-puzzle-5.2.ebuild 26 Apr 2012 16:08:36 -0000 1.12
@@ -1,6 +1,6 @@
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.11 2012/04/26 16:06:44 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.12 2012/04/26 16:08:36 jlec Exp $
EAPI=4
@@ -26,12 +26,12 @@
src_prepare() {
if ! use mpi; then
- cd ${S}/src
+ cd "${S}"/src
sed \
-e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
-e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
-i Makefile || die
- cd ${S}
+ cd "${S}"
fi
}
^ permalink raw reply [flat|nested] 5+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild
@ 2012-05-24 10:28 Justin Lecher (jlec)
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher (jlec) @ 2012-05-24 10:28 UTC (permalink / raw
To: gentoo-commits
jlec 12/05/24 10:28:51
Modified: ChangeLog tree-puzzle-5.2.ebuild
Log:
sci-biology/tree-puzzle: Corrected dep from sys-cluster/lam-mpi to virtual/mpi, #415765
(Portage version: 2.2.0_alpha107/cvs/Linux x86_64)
Revision Changes Path
1.18 sci-biology/tree-puzzle/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.18&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.18&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?r1=1.17&r2=1.18
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v
retrieving revision 1.17
retrieving revision 1.18
diff -u -r1.17 -r1.18
--- ChangeLog 26 Apr 2012 16:08:36 -0000 1.17
+++ ChangeLog 24 May 2012 10:28:51 -0000 1.18
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/tree-puzzle
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.17 2012/04/26 16:08:36 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.18 2012/05/24 10:28:51 jlec Exp $
+
+ 24 May 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
+ Corrected dep from sys-cluster/lam-mpi to virtual/mpi, #415765
26 Apr 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
Add missing quotes
1.13 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.13&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.13&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?r1=1.12&r2=1.13
Index: tree-puzzle-5.2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v
retrieving revision 1.12
retrieving revision 1.13
diff -u -r1.12 -r1.13
--- tree-puzzle-5.2.ebuild 26 Apr 2012 16:08:36 -0000 1.12
+++ tree-puzzle-5.2.ebuild 24 May 2012 10:28:51 -0000 1.13
@@ -1,6 +1,6 @@
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.12 2012/04/26 16:08:36 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.13 2012/05/24 10:28:51 jlec Exp $
EAPI=4
@@ -15,7 +15,7 @@
KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
-DEPEND="mpi? ( sys-cluster/lam-mpi )"
+DEPEND="mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
pkg_setup () {
@@ -26,12 +26,10 @@
src_prepare() {
if ! use mpi; then
- cd "${S}"/src
sed \
-e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
-e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
- -i Makefile || die
- cd "${S}"
+ -i "${S}"/src/Makefile || die
fi
}
^ permalink raw reply [flat|nested] 5+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild
@ 2012-08-01 15:41 Justin Lecher (jlec)
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher (jlec) @ 2012-08-01 15:41 UTC (permalink / raw
To: gentoo-commits
jlec 12/08/01 15:41:29
Modified: ChangeLog tree-puzzle-5.2.ebuild
Log:
sci-biology/tree-puzzle: Mask stupid test, which fails due to precision reached depending on optimization used at compile time, #297646; fix move to EAPI=4, #429354
(Portage version: 2.2.0_alpha120/cvs/Linux x86_64)
Revision Changes Path
1.19 sci-biology/tree-puzzle/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.19&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?rev=1.19&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/ChangeLog?r1=1.18&r2=1.19
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v
retrieving revision 1.18
retrieving revision 1.19
diff -u -r1.18 -r1.19
--- ChangeLog 24 May 2012 10:28:51 -0000 1.18
+++ ChangeLog 1 Aug 2012 15:41:29 -0000 1.19
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/tree-puzzle
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.18 2012/05/24 10:28:51 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.19 2012/08/01 15:41:29 jlec Exp $
+
+ 01 Aug 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild,
+ +files/tree-puzzle-impl-dec.patch:
+ Mask stupid test, which fails due to precision reached depending on
+ optimization used at compile time, #297646; fix move to EAPI=4, #429354
24 May 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
Corrected dep from sys-cluster/lam-mpi to virtual/mpi, #415765
1.14 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.14&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?rev=1.14&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild?r1=1.13&r2=1.14
Index: tree-puzzle-5.2.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v
retrieving revision 1.13
retrieving revision 1.14
diff -u -r1.13 -r1.14
--- tree-puzzle-5.2.ebuild 24 May 2012 10:28:51 -0000 1.13
+++ tree-puzzle-5.2.ebuild 1 Aug 2012 15:41:29 -0000 1.14
@@ -1,10 +1,10 @@
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.13 2012/05/24 10:28:51 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.14 2012/08/01 15:41:29 jlec Exp $
EAPI=4
-inherit toolchain-funcs
+inherit eutils toolchain-funcs
DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data"
HOMEPAGE="http://www.tree-puzzle.de"
@@ -18,6 +18,8 @@
DEPEND="mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
+RESTRICT="test"
+
pkg_setup () {
use mpi && [ $(tc-getCC) = icc ] && die "The parallelized version of tree-puzzle cannot be compiled using icc.
Either disable the \"mpi\" USE flag to compile only the non-parallelized
@@ -25,6 +27,12 @@
}
src_prepare() {
+ epatch "${FILESDIR}"/${PN}-impl-dec.patch
+}
+
+src_configure() {
+ default
+
if ! use mpi; then
sed \
-e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
^ permalink raw reply [flat|nested] 5+ messages in thread
end of thread, other threads:[~2012-08-01 15:41 UTC | newest]
Thread overview: 5+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2012-08-01 15:41 [gentoo-commits] gentoo-x86 commit in sci-biology/tree-puzzle: ChangeLog tree-puzzle-5.2.ebuild Justin Lecher (jlec)
-- strict thread matches above, loose matches on Subject: below --
2012-05-24 10:28 Justin Lecher (jlec)
2012-04-26 16:08 Justin Lecher (jlec)
2012-04-26 16:06 Justin Lecher (jlec)
2010-01-01 21:44 Christian Faulhammer (fauli)
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox