* [gentoo-commits] gentoo-x86 commit in sci-biology/hmmer: ChangeLog hmmer-3.0.ebuild
@ 2010-07-16 21:56 Markos Chandras (hwoarang)
0 siblings, 0 replies; 3+ messages in thread
From: Markos Chandras (hwoarang) @ 2010-07-16 21:56 UTC (permalink / raw
To: gentoo-commits
hwoarang 10/07/16 21:56:53
Modified: ChangeLog hmmer-3.0.ebuild
Log:
Stable on amd64 wrt bug #328419
(Portage version: 2.2_rc67/cvs/Linux x86_64)
Revision Changes Path
1.29 sci-biology/hmmer/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.29&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.29&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?r1=1.28&r2=1.29
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v
retrieving revision 1.28
retrieving revision 1.29
diff -u -r1.28 -r1.29
--- ChangeLog 28 Mar 2010 20:51:02 -0000 1.28
+++ ChangeLog 16 Jul 2010 21:56:53 -0000 1.29
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/hmmer
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.28 2010/03/28 20:51:02 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.29 2010/07/16 21:56:53 hwoarang Exp $
+
+ 16 Jul 2010; Markos Chandras <hwoarang@gentoo.org> hmmer-3.0.ebuild:
+ Stable on amd64 wrt bug #328419
*hmmer-3.0 (28 Mar 2010)
1.2 sci-biology/hmmer/hmmer-3.0.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?r1=1.1&r2=1.2
Index: hmmer-3.0.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- hmmer-3.0.ebuild 28 Mar 2010 20:51:02 -0000 1.1
+++ hmmer-3.0.ebuild 16 Jul 2010 21:56:53 -0000 1.2
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.1 2010/03/28 20:51:02 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.2 2010/07/16 21:56:53 hwoarang Exp $
EAPI="2"
@@ -11,7 +11,7 @@
LICENSE="GPL-3"
SLOT="0"
IUSE="+sse mpi +threads gsl"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
+KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
DEPEND="mpi? ( virtual/mpi )
gsl? ( >=sci-libs/gsl-1.12 )"
^ permalink raw reply [flat|nested] 3+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/hmmer: ChangeLog hmmer-3.0.ebuild
@ 2010-07-18 11:38 Christian Faulhammer (fauli)
0 siblings, 0 replies; 3+ messages in thread
From: Christian Faulhammer (fauli) @ 2010-07-18 11:38 UTC (permalink / raw
To: gentoo-commits
fauli 10/07/18 11:38:27
Modified: ChangeLog hmmer-3.0.ebuild
Log:
stable x86, bug 328419
(Portage version: 2.1.8.3/cvs/Linux i686)
Revision Changes Path
1.31 sci-biology/hmmer/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.31&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.31&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?r1=1.30&r2=1.31
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v
retrieving revision 1.30
retrieving revision 1.31
diff -u -r1.30 -r1.31
--- ChangeLog 18 Jul 2010 10:20:59 -0000 1.30
+++ ChangeLog 18 Jul 2010 11:38:27 -0000 1.31
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/hmmer
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.30 2010/07/18 10:20:59 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.31 2010/07/18 11:38:27 fauli Exp $
+
+ 18 Jul 2010; Christian Faulhammer <fauli@gentoo.org> hmmer-3.0.ebuild:
+ stable x86, bug 328419
18 Jul 2010; Kacper Kowalik <xarthisius@gentoo.org> hmmer-2.3.2-r1.ebuild,
hmmer-2.3.2-r2.ebuild, hmmer-3.0.ebuild, +files/hmmer-3.0-fix_tests.patch:
1.4 sci-biology/hmmer/hmmer-3.0.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?r1=1.3&r2=1.4
Index: hmmer-3.0.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- hmmer-3.0.ebuild 18 Jul 2010 10:20:59 -0000 1.3
+++ hmmer-3.0.ebuild 18 Jul 2010 11:38:27 -0000 1.4
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.3 2010/07/18 10:20:59 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.4 2010/07/18 11:38:27 fauli Exp $
EAPI="2"
@@ -13,7 +13,7 @@
LICENSE="GPL-3"
SLOT="0"
IUSE="+sse mpi +threads gsl"
-KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
+KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux ~ppc-macos"
DEPEND="mpi? ( virtual/mpi )
gsl? ( >=sci-libs/gsl-1.12 )"
^ permalink raw reply [flat|nested] 3+ messages in thread
* [gentoo-commits] gentoo-x86 commit in sci-biology/hmmer: ChangeLog hmmer-3.0.ebuild
@ 2012-06-28 16:50 Justin Lecher (jlec)
0 siblings, 0 replies; 3+ messages in thread
From: Justin Lecher (jlec) @ 2012-06-28 16:50 UTC (permalink / raw
To: gentoo-commits
jlec 12/06/28 16:50:49
Modified: ChangeLog hmmer-3.0.ebuild
Log:
sci-biology/hmmer: Fix the patch, thanks xarthisius and bonsaikitten for help
(Portage version: 2.2.0_alpha114/cvs/Linux x86_64)
Revision Changes Path
1.36 sci-biology/hmmer/ChangeLog
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.36&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?rev=1.36&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/ChangeLog?r1=1.35&r2=1.36
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v
retrieving revision 1.35
retrieving revision 1.36
diff -u -r1.35 -r1.36
--- ChangeLog 28 Jun 2012 16:38:29 -0000 1.35
+++ ChangeLog 28 Jun 2012 16:50:49 -0000 1.36
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/hmmer
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.35 2012/06/28 16:38:29 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.36 2012/06/28 16:50:49 jlec Exp $
+
+ 28 Jun 2012; Justin Lecher <jlec@gentoo.org> hmmer-3.0.ebuild,
+ -files/hmmer-3.0-perl-5.16.patch:
+ Fix the patch, thanks xarthisius and bonsaikitten for help
28 Jun 2012; Justin Lecher <jlec@gentoo.org> files/hmmer-3.0-perl-5.16.patch:
Fix patch, screwed VCS tags, #423983
1.6 sci-biology/hmmer/hmmer-3.0.ebuild
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.6&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?rev=1.6&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild?r1=1.5&r2=1.6
Index: hmmer-3.0.ebuild
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- hmmer-3.0.ebuild 25 Jun 2012 06:23:12 -0000 1.5
+++ hmmer-3.0.ebuild 28 Jun 2012 16:50:49 -0000 1.6
@@ -1,6 +1,6 @@
-# Copyright 1999-2012 Gentoo Foundation
+## Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.5 2012/06/25 06:23:12 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0.ebuild,v 1.6 2012/06/28 16:50:49 jlec Exp $
EAPI=4
@@ -23,7 +23,7 @@
src_prepare() {
epatch \
"${FILESDIR}"/${P}-fix_tests.patch \
- "${FILESDIR}"/${P}-perl-5.16.patch
+ "${FILESDIR}"/${P}-perl-5.16-2.patch
}
src_configure() {
^ permalink raw reply [flat|nested] 3+ messages in thread
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2010-07-18 11:38 Christian Faulhammer (fauli)
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