From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from ) id 1PQ0qp-0000S6-D0 for garchives@archives.gentoo.org; Tue, 07 Dec 2010 16:57:15 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 1B4F3E054D; Tue, 7 Dec 2010 16:57:07 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id C842AE054D for ; Tue, 7 Dec 2010 16:57:06 +0000 (UTC) Received: from flycatcher.gentoo.org (flycatcher.gentoo.org [81.93.255.6]) (using TLSv1 with cipher ADH-CAMELLIA256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 0232D1B4049 for ; Tue, 7 Dec 2010 16:57:06 +0000 (UTC) Received: by flycatcher.gentoo.org (Postfix, from userid 2264) id 873A820054; Tue, 7 Dec 2010 16:57:04 +0000 (UTC) From: "Justin Lecher (jlec)" To: gentoo-commits@lists.gentoo.org Reply-To: gentoo-dev@lists.gentoo.org, jlec@gentoo.org Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/refmac: ChangeLog refmac-5.6.0094.ebuild refmac-5.6.0089.ebuild refmac-5.6.0088.ebuild refmac-5.6.0091.ebuild refmac-5.6.0092.ebuild refmac-5.6.0086.ebuild refmac-5.6.0085.ebuild refmac-5.6.0090.ebuild X-VCS-Repository: gentoo-x86 X-VCS-Files: ChangeLog refmac-5.6.0094.ebuild refmac-5.6.0089.ebuild refmac-5.6.0088.ebuild refmac-5.6.0091.ebuild refmac-5.6.0092.ebuild refmac-5.6.0086.ebuild refmac-5.6.0085.ebuild refmac-5.6.0090.ebuild X-VCS-Directories: sci-chemistry/refmac X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher Content-Type: text/plain; charset=utf8 Message-Id: <20101207165704.873A820054@flycatcher.gentoo.org> Date: Tue, 7 Dec 2010 16:57:04 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: cb212bde-f8d7-4b11-b960-35e80d25df9b X-Archives-Hash: 8951ebf9328062310cd672cb9fb07474 jlec 10/12/07 16:57:04 Modified: ChangeLog Added: refmac-5.6.0094.ebuild Removed: refmac-5.6.0089.ebuild refmac-5.6.0088.ebuild refmac-5.6.0091.ebuild refmac-5.6.0092.ebuild refmac-5.6.0086.ebuild refmac-5.6.0085.ebuild refmac-5.6.0090.ebuild Log: Version Bump, cleaned old =20 (Portage version: 2.2.0_alpha7/cvs/Linux x86_64) Revision Changes Path 1.26 sci-chemistry/refmac/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/refm= ac/ChangeLog?rev=3D1.26&view=3Dmarkup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/refm= ac/ChangeLog?rev=3D1.26&content-type=3Dtext/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/refm= ac/ChangeLog?r1=3D1.25&r2=3D1.26 Index: ChangeLog =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/refmac/ChangeLog,v retrieving revision 1.25 retrieving revision 1.26 diff -u -r1.25 -r1.26 --- ChangeLog 17 Nov 2010 07:49:03 -0000 1.25 +++ ChangeLog 7 Dec 2010 16:57:04 -0000 1.26 @@ -1,6 +1,15 @@ # ChangeLog for sci-chemistry/refmac # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/refmac/ChangeLog,v 1.25= 2010/11/17 07:49:03 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/refmac/ChangeLog,v 1.26= 2010/12/07 16:57:04 jlec Exp $ + +*refmac-5.6.0094 (07 Dec 2010) + + 07 Dec 2010; Justin Lecher + +files/5.6.0094-allow-dynamic-linking.patch, -refmac-5.6.0085.ebuild, + -refmac-5.6.0086.ebuild, -refmac-5.6.0088.ebuild, -refmac-5.6.0089.ebu= ild, + -refmac-5.6.0090.ebuild, -refmac-5.6.0091.ebuild, -refmac-5.6.0092.ebu= ild, + +refmac-5.6.0094.ebuild: + Version Bump, cleaned old =20 *refmac-5.6.0093 (17 Nov 2010) =20 1.1 sci-chemistry/refmac/refmac-5.6.0094.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/refm= ac/refmac-5.6.0094.ebuild?rev=3D1.1&view=3Dmarkup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/refm= ac/refmac-5.6.0094.ebuild?rev=3D1.1&content-type=3Dtext/plain Index: refmac-5.6.0094.ebuild =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D # Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/refmac/refmac-5.6.0094.e= build,v 1.1 2010/12/07 16:57:04 jlec Exp $ EAPI=3D"2" inherit fortran base toolchain-funcs versionator MY_PV=3D"$(get_version_component_range 1-2)_source_v${PV}" DESCRIPTION=3D"Macromolecular crystallographic refinement program" HOMEPAGE=3D"http://www.ysbl.york.ac.uk/~garib/refmac/" SRC_URI=3D"${HOMEPAGE}data/refmac_experimental/${PN}${MY_PV}.tar.gz test? ( http://dev.gentooexperimental.org/~jlec/distfiles/test-framework= .tar.gz )" SLOT=3D"0" LICENSE=3D"ccp4" KEYWORDS=3D"~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE=3D"test" RDEPEND=3D" sci-libs/ccp4-libs sci-libs/mmdb >sci-libs/monomer-db-1 virtual/blas virtual/lapack" DEPEND=3D"${RDEPEND}" S=3D"${WORKDIR}" PATCHES=3D( "${FILESDIR}"/${PV}-allow-dynamic-linking.patch ) src_prepare() { base_src_prepare use test && epatch "${FILESDIR}"/5.5-test.log.patch } src_compile() { emake \ FC=3D$(tc-getFC) \ CC=3D$(tc-getCC) \ CXX=3D$(tc-getCXX) \ COPTIM=3D"${CFLAGS}" \ FOPTIM=3D"${FFLAGS:- -O2}" \ VERSION=3D"" \ XFFLAGS=3D"-fno-second-underscore" \ LLIBCCP=3D"-lccp4f -lccp4c -lccif -lmmdb -lstdc++" \ LLIBLAPACK=3D"$(pkg-config --libs lapack blas)" \ || die } src_test() { einfo "Starting tests ..." export PATH=3D"${WORKDIR}/test-framework/scripts:${S}:${PATH}" export CCP4_TEST=3D"${WORKDIR}"/test-framework export CCP4_SCR=3D"${T}" ln -sf refmac "${S}"/refmac5 sed '/^ANISOU/d' -i ${CCP4_TEST}/data/pdb/1vr7.pdb ccp4-run-thorough-tests -v test_refmac5 || die } src_install() { for i in refmac libcheck FreeTwin header2matr; do exeinto /usr/libexec/ccp4/bin/ doexe ${i} || die dosym ../libexec/ccp4/bin/${i} /usr/bin/${i} done dosym refmac /usr/bin/refmac5 || die }