[gentoo-commits] gentoo-x86 commit in sci-biology/psipred: psipred-3.0.ebuild ChangeLog psipred-2.6.1-r1.ebuild psipred-2.6.1.ebuild

[gentoo-commits] gentoo-x86 commit in sci-biology/psipred: psipred-3.0.ebuild ChangeLog psipred-2.6.1-r1.ebuild psipred-2.6.1.ebuild

[Justin Lecher (jlec)]

jlec        10/05/06 18:27:50

  Modified:             ChangeLog
  Added:                psipred-3.0.ebuild psipred-2.6.1-r1.ebuild
  Removed:              psipred-2.6.1.ebuild
  Log:
  Version Bump, #317977; fixed installation of shipped bins
  (Portage version: 2.2_rc67/cvs/Linux x86_64)

Revision  Changes    Path
1.2                  sci-biology/psipred/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/ChangeLog?rev=1.2&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/ChangeLog?rev=1.2&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/ChangeLog?r1=1.1&r2=1.2

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/psipred/ChangeLog,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- ChangeLog	28 Feb 2010 10:31:18 -0000	1.1
+++ ChangeLog	6 May 2010 18:27:49 -0000	1.2
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/psipred
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/ChangeLog,v 1.1 2010/02/28 10:31:18 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/ChangeLog,v 1.2 2010/05/06 18:27:49 jlec Exp $
+
+*psipred-3.0 (06 May 2010)
+*psipred-2.6.1-r1 (06 May 2010)
+
+  06 May 2010; Justin Lecher <jlec@gentoo.org> +files/3.0-path.patch,
+  -psipred-2.6.1.ebuild, +psipred-2.6.1-r1.ebuild, +psipred-3.0.ebuild:
+  Version Bump, #317977; fixed installation of shipped bins
 
 *psipred-2.6.1 (28 Feb 2010)
 



1.1                  sci-biology/psipred/psipred-3.0.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/psipred-3.0.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/psipred-3.0.ebuild?rev=1.1&content-type=text/plain

Index: psipred-3.0.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.0.ebuild,v 1.1 2010/05/06 18:27:49 jlec Exp $

EAPI="3"

inherit eutils prefix toolchain-funcs versionator

MY_P="${PN}$(delete_all_version_separators)"

DESCRIPTION="Protein Secondary Structure Prediction"
HOMEPAGE="http://bioinf.cs.ucl.ac.uk/psipred/"
SRC_URI="http://bioinf.cs.ucl.ac.uk/downloads/${PN}/${MY_P}.tar.gz"

LICENSE="psipred"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

RDEPEND="
	sci-biology/ncbi-tools
	sci-biology/ncbi-tools++"

S="${WORKDIR}"

src_prepare() {
	rm -f bin/*
	epatch "${FILESDIR}"/2.6.1-Makefile.patch
	epatch "${FILESDIR}"/${PV}-path.patch
	eprefixify runpsipred*
}

src_compile() {
	emake -C src CC=$(tc-getCC) || die "emake failed"
}

src_install() {
	emake -C src DESTDIR="${D}" install || die "installation failed"
	dobin runpsipred* || die
	insinto /usr/share/${PN}
	doins -r data || die "failed to install data"
	dodoc README || die "nothing to read"
}

pkg_postinst() {
	elog "Please use the update_blastdb.pl in order to"
	elog "maintain your own local blastdb"
}



1.1                  sci-biology/psipred/psipred-2.6.1-r1.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/psipred-2.6.1-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/psipred/psipred-2.6.1-r1.ebuild?rev=1.1&content-type=text/plain

Index: psipred-2.6.1-r1.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-2.6.1-r1.ebuild,v 1.1 2010/05/06 18:27:50 jlec Exp $

EAPI="3"

inherit eutils prefix toolchain-funcs versionator

MY_P="${PN}$(delete_all_version_separators)"

DESCRIPTION="Protein Secondary Structure Prediction"
HOMEPAGE="http://bioinf.cs.ucl.ac.uk/psipred/"
SRC_URI="http://bioinf.cs.ucl.ac.uk/downloads/${PN}/${MY_P}.tar.gz"

LICENSE="psipred"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

RDEPEND="
	sci-biology/ncbi-tools
	sci-biology/ncbi-tools++"

S="${WORKDIR}"

src_prepare() {
	rm -f bin/*
	epatch "${FILESDIR}"/${PV}-Makefile.patch
	epatch "${FILESDIR}"/${PV}-path.patch
	eprefixify runpsipred*
}

src_compile() {
	emake -C src CC=$(tc-getCC) || die "emake failed"
}

src_install() {
	emake -C src DESTDIR="${D}" install || die "installation failed"
	dobin runpsipred* || die
	insinto /usr/share/${PN}
	doins -r data || die "failed to install data"
	dodoc README || die "nothing to read"
}

pkg_postinst() {
	elog "Please use the update_blastdb.pl in order to"
	elog "maintain your own local blastdb"
}