[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

["Nowa Ammerlaan" <nowa@gentoo.org>]

commit:     ae0f5a7eac0d9d02c7d62737477f07a1c61e94f1
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Sun Jan 26 14:23:56 2025 +0000
Commit:     Nowa Ammerlaan <nowa <AT> gentoo <DOT> org>
CommitDate: Thu Feb  6 13:54:32 2025 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ae0f5a7e

sci-biology/deeptools: drop outdated ebuilds

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Closes: https://github.com/gentoo/sci/pull/1317
Signed-off-by: Nowa Ammerlaan <nowa <AT> gentoo.org>

 sci-biology/deeptools/deeptools-3.5.0.ebuild | 37 ----------------------------
 sci-biology/deeptools/deeptools-3.5.1.ebuild | 37 ----------------------------
 2 files changed, 74 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild
deleted file mode 100644
index 7c2eaa739..000000000
--- a/sci-biology/deeptools/deeptools-3.5.0.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{10..11} )
-
-inherit distutils-r1
-
-DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
-HOMEPAGE="https://github.com/deeptools/deepTools"
-SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64"
-
-# TODO: fix this
-RESTRICT="test"
-
-RDEPEND="
-	>=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}]
-	>=dev-python/numpy-1.9.0[${PYTHON_USEDEP}]
-	>=dev-python/numpydoc-0.5[${PYTHON_USEDEP}]
-	>=dev-python/scipy-0.17.0[${PYTHON_USEDEP}]
-	dev-python/plotly[${PYTHON_USEDEP}]
-	>=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}]
-	>=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}]
-	>=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}]
-"
-
-S="${WORKDIR}/deepTools-${PV}"
-
-distutils_enable_sphinx docs dev-python/sphinx-rtd-theme dev-python/sphinx-argparse
-#distutils_enable_tests nose

diff --git a/sci-biology/deeptools/deeptools-3.5.1.ebuild b/sci-biology/deeptools/deeptools-3.5.1.ebuild
deleted file mode 100644
index 7c2eaa739..000000000
--- a/sci-biology/deeptools/deeptools-3.5.1.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{10..11} )
-
-inherit distutils-r1
-
-DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
-HOMEPAGE="https://github.com/deeptools/deepTools"
-SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64"
-
-# TODO: fix this
-RESTRICT="test"
-
-RDEPEND="
-	>=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}]
-	>=dev-python/numpy-1.9.0[${PYTHON_USEDEP}]
-	>=dev-python/numpydoc-0.5[${PYTHON_USEDEP}]
-	>=dev-python/scipy-0.17.0[${PYTHON_USEDEP}]
-	dev-python/plotly[${PYTHON_USEDEP}]
-	>=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}]
-	>=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}]
-	>=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}]
-"
-
-S="${WORKDIR}/deepTools-${PV}"
-
-distutils_enable_sphinx docs dev-python/sphinx-rtd-theme dev-python/sphinx-argparse
-#distutils_enable_tests nose