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* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2017-04-22 16:09 Justin Lecher
  0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2017-04-22 16:09 UTC (permalink / raw
  To: gentoo-commits

commit:     3cc49dd6ca6d216bfc03f0d4629d806670530d7b
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Apr 14 09:52:36 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Apr 22 16:09:51 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3cc49dd6

sci-biology/velvet: simplify tests in ebuild

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Closes: https://github.com/gentoo/gentoo/pull/4421

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index 53f5dd644f9..31560aee188 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -26,7 +26,7 @@ src_prepare() {
 	if ! use doc; then
 		sed -i -e '/default :/ s/doc//' "${S}"/Makefile || die
 	fi
-	elog "Upstream recommendes using -O3 in CFLAGS"
+	elog "Upstream recommends using -O3 in CFLAGS"
 	echo
 	elog "To adjust the MAXKMERLENGTH, CATEGORIES, BIGASSEMBLY, LONGSEQUENCES parameters"
 	elog "as described in the PDF manual, please set the variables by prepending VELVET_ in"
@@ -53,11 +53,11 @@ src_prepare() {
 		CFLAGS="${CFLAGS}"
 		OPT="${CFLAGS}"
 	)
-	if use openmp; then MAKE_XOPTS+=( OPENMP=1 ); fi
-	if [[ ${VELVET_MAXKMERLENGTH} != "" ]]; then MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} ); fi
-	if [[ ${VELVET_CATEGORIES} != "" ]]; then MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} ); fi
-	if [[ ${VELVET_BIGASSEMBLY} != "" ]]; then MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} ); fi
-	if [[ ${VELVET_LONGSEQUENCES} != "" ]]; then MAKE_XOPTS+=( LONGSEQUENCES=${VELVET_LONGSEQUENCES} ); fi
+	use openmp && MAKE_XOPTS+=( OPENMP=1 )
+	test "${VELVET_MAXKMERLENGTH}" != "" && MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} )
+	test "${VELVET_CATEGORIES}" != "" && MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} )
+	test "${VELVET_BIGASSEMBLY}" != "" && MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} )
+	test "${VELVET_LONGSEQUENCES}" != "" && MAKE_XOPTS+=( LONGSEQUENCES=${VELVET_LONGSEQUENCES} )
 }
 
 src_compile() {


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2017-04-22 16:09 Justin Lecher
  0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2017-04-22 16:09 UTC (permalink / raw
  To: gentoo-commits

commit:     3f6724509641d050ff8b5ac4396c2195e0a142d7
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Apr 14 11:12:06 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Apr 22 16:09:51 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3f672450

sci-biology/velvet: v3 expose additional variables as described in manual

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Closes: https://github.com/gentoo/gentoo/pull/4421

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index 31560aee188..645f9fe67d0 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -54,10 +54,10 @@ src_prepare() {
 		OPT="${CFLAGS}"
 	)
 	use openmp && MAKE_XOPTS+=( OPENMP=1 )
-	test "${VELVET_MAXKMERLENGTH}" != "" && MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} )
-	test "${VELVET_CATEGORIES}" != "" && MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} )
-	test "${VELVET_BIGASSEMBLY}" != "" && MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} )
-	test "${VELVET_LONGSEQUENCES}" != "" && MAKE_XOPTS+=( LONGSEQUENCES=${VELVET_LONGSEQUENCES} )
+	[[ ! -z "${VELVET_MAXKMERLENGTH}" ]] && MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} )
+	[[ ! -z "${VELVET_CATEGORIES}" ]] && MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} )
+	[[ ! -z "${VELVET_BIGASSEMBLY}" ]] && MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} )
+	[[ ! -z "${VELVET_LONGSEQUENCES}" ]] && MAKE_XOPTS+=( LONGSEQUENCES=${VELVET_LONGSEQUENCES} )
 }
 
 src_compile() {


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2017-04-22 16:09 Justin Lecher
  0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2017-04-22 16:09 UTC (permalink / raw
  To: gentoo-commits

commit:     4607de10af1d1389884d38ffdaad0c24baa8a0db
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat Apr 15 11:22:35 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Apr 22 16:09:52 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4607de10

sci-biology/velvet: v4 expose additional variables as described in manual

Also move the -j1 argument values onto the emake line directly.

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Closes: https://github.com/gentoo/gentoo/pull/4421

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 7 +++----
 1 file changed, 3 insertions(+), 4 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index 645f9fe67d0..d5a93f2f3e4 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -34,7 +34,6 @@ src_prepare() {
 	elog "Set them either in your environment or in /etc/portage/make.conf, then re-emerge"
 	elog "the package. For example:"
 	elog "  VELVET_MAXKMERLENGTH=NN emerge [options] velvet"
-	MAKEOPTS+=" -j1"
 
 	if [[ $(tc-getCC) =~ gcc ]]; then
 		local eopenmp=-fopenmp
@@ -61,12 +60,12 @@ src_prepare() {
 }
 
 src_compile() {
-	emake "${MAKE_XOPTS[@]}"
-	emake "${MAKE_XOPTS[@]}" color
+	emake "${MAKE_XOPTS[@]}" -j1
+	emake "${MAKE_XOPTS[@]}" -j1 color
 }
 
 src_test() {
-	emake "${MAKE_XOPTS[@]}" test
+	emake "${MAKE_XOPTS[@]}" -j1 test
 }
 
 src_install() {


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2017-04-22 16:09 Justin Lecher
  0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2017-04-22 16:09 UTC (permalink / raw
  To: gentoo-commits

commit:     6b672731c97e773142cbc7ee9a5a09cf2c4c5d60
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Apr 14 07:42:19 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Apr 22 16:09:51 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6b672731

sci-biology/velvet: expose additional variables as described in manual and needed at compile time

Package-Manager: Portage-2.3.5, Repoman-2.3.2
Closes: https://github.com/gentoo/gentoo/pull/4421

Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 13 +++++++++----
 1 file changed, 9 insertions(+), 4 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index c6c841be3e4..53f5dd644f9 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -28,9 +28,11 @@ src_prepare() {
 	fi
 	elog "Upstream recommendes using -O3 in CFLAGS"
 	echo
-	elog "To adjust the MAXKMERLENGTH or CATEGORIES parameters as described in the manual,"
-	elog "please set the variables VELVET_MAXKMERLENGTH or VELVET_CATEGORIES in your"
-	elog "environment or /etc/make.conf, then re-emerge the package. For example:"
+	elog "To adjust the MAXKMERLENGTH, CATEGORIES, BIGASSEMBLY, LONGSEQUENCES parameters"
+	elog "as described in the PDF manual, please set the variables by prepending VELVET_ in"
+	elog "front of it. For example VELVET_MAXKMERLENGTH, VELVET_CATEGORIES, ..."
+	elog "Set them either in your environment or in /etc/portage/make.conf, then re-emerge"
+	elog "the package. For example:"
 	elog "  VELVET_MAXKMERLENGTH=NN emerge [options] velvet"
 	MAKEOPTS+=" -j1"
 
@@ -51,8 +53,11 @@ src_prepare() {
 		CFLAGS="${CFLAGS}"
 		OPT="${CFLAGS}"
 	)
+	if use openmp; then MAKE_XOPTS+=( OPENMP=1 ); fi
 	if [[ ${VELVET_MAXKMERLENGTH} != "" ]]; then MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} ); fi
 	if [[ ${VELVET_CATEGORIES} != "" ]]; then MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} ); fi
+	if [[ ${VELVET_BIGASSEMBLY} != "" ]]; then MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} ); fi
+	if [[ ${VELVET_LONGSEQUENCES} != "" ]]; then MAKE_XOPTS+=( LONGSEQUENCES=${VELVET_LONGSEQUENCES} ); fi
 }
 
 src_compile() {


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2017-09-02 14:56 Michael Palimaka
  0 siblings, 0 replies; 8+ messages in thread
From: Michael Palimaka @ 2017-09-02 14:56 UTC (permalink / raw
  To: gentoo-commits

commit:     115947ebedac8742bad5b29b475bfb127f8f2788
Author:     Francesco Turco <fturco <AT> fastmail <DOT> fm>
AuthorDate: Wed Aug 23 20:46:27 2017 +0000
Commit:     Michael Palimaka <kensington <AT> gentoo <DOT> org>
CommitDate: Sat Sep  2 14:56:06 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=115947eb

sci-biology/velvet: update make.conf path

 sci-biology/velvet/velvet-1.0.18-r1.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.0.18-r1.ebuild b/sci-biology/velvet/velvet-1.0.18-r1.ebuild
index 26c0ed072d3..4b7d1958cee 100644
--- a/sci-biology/velvet/velvet-1.0.18-r1.ebuild
+++ b/sci-biology/velvet/velvet-1.0.18-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=4
@@ -48,6 +48,6 @@ src_install() {
 pkg_postinst() {
 	elog "To adjust the MAXKMERLENGTH or CATEGORIES parameters as described in the manual,"
 	elog "please set the variables VELVET_MAXKMERLENGTH or VELVET_CATEGORIES in your"
-	elog "environment or /etc/make.conf, then re-emerge the package. For example:"
+	elog "environment or /etc/portage/make.conf, then re-emerge the package. For example:"
 	elog "	VELVET_MAXKMERLENGTH=NN emerge [options] velvet"
 }


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2018-05-21 17:05 Aaron Bauman
  0 siblings, 0 replies; 8+ messages in thread
From: Aaron Bauman @ 2018-05-21 17:05 UTC (permalink / raw
  To: gentoo-commits

commit:     e43ee1e262f95f661e3418cb9addcfb2355f0a8a
Author:     Michael Mair-Keimberger <m.mairkeimberger <AT> gmail <DOT> com>
AuthorDate: Mon May 21 10:15:03 2018 +0000
Commit:     Aaron Bauman <bman <AT> gentoo <DOT> org>
CommitDate: Mon May 21 17:02:31 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e43ee1e2

sci-biology/velvet: use HTTPs

 sci-biology/velvet/velvet-1.0.18-r1.ebuild | 6 +++---
 sci-biology/velvet/velvet-1.2.10.ebuild    | 6 +++---
 2 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.0.18-r1.ebuild b/sci-biology/velvet/velvet-1.0.18-r1.ebuild
index 4b7d1958cee..a8ec87b6625 100644
--- a/sci-biology/velvet/velvet-1.0.18-r1.ebuild
+++ b/sci-biology/velvet/velvet-1.0.18-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=4
@@ -8,8 +8,8 @@ inherit eutils toolchain-funcs flag-o-matic
 MY_P=${PN}_${PV}
 
 DESCRIPTION="A sequence assembler for very short reads"
-HOMEPAGE="http://www.ebi.ac.uk/~zerbino/velvet/"
-SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
+HOMEPAGE="https://www.ebi.ac.uk/~zerbino/velvet/"
+SRC_URI="https://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
 
 LICENSE="GPL-2"
 SLOT="0"

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index d5a93f2f3e4..3de28bdb748 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -8,8 +8,8 @@ inherit eutils flag-o-matic toolchain-funcs
 MY_P=${PN}_${PV}
 
 DESCRIPTION="A sequence assembler for very short reads"
-HOMEPAGE="http://www.ebi.ac.uk/~zerbino/velvet/"
-SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
+HOMEPAGE="https://www.ebi.ac.uk/~zerbino/velvet/"
+SRC_URI="https://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
 
 LICENSE="GPL-2"
 SLOT="0"


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2021-08-22 19:38 David Seifert
  0 siblings, 0 replies; 8+ messages in thread
From: David Seifert @ 2021-08-22 19:38 UTC (permalink / raw
  To: gentoo-commits

commit:     d87cd1f599e0af88cc468f1d2ce330bbbae3a827
Author:     Jakov Smolic <jakov.smolic <AT> sartura <DOT> hr>
AuthorDate: Sun Aug 22 19:37:16 2021 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Aug 22 19:37:16 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d87cd1f5

sci-biology/velvet: Port to EAPI 8

Signed-off-by: Jakov Smolic <jakov.smolic <AT> sartura.hr>
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 15 ++++++---------
 1 file changed, 6 insertions(+), 9 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index b4d8ae8641b..ea0b3630b78 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -1,28 +1,25 @@
 # Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=8
 
 inherit flag-o-matic toolchain-funcs
 
-MY_P=${PN}_${PV}
-
+MY_P="${PN}_${PV}"
 DESCRIPTION="A sequence assembler for very short reads"
 HOMEPAGE="https://www.ebi.ac.uk/~zerbino/velvet/"
 SRC_URI="https://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
+S="${WORKDIR}"/${MY_P}
 
 LICENSE="GPL-2"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="doc openmp"
 
-RDEPEND=""
-DEPEND="${RDEPEND}
-	doc? ( virtual/latex-base )"
-
-S="${WORKDIR}"/${MY_P}
+BDEPEND="doc? ( virtual/latex-base )"
 
 src_prepare() {
+	default
 	if ! use doc; then
 		sed -i -e '/default :/ s/doc//' "${S}"/Makefile || die
 	fi
@@ -48,7 +45,7 @@ src_prepare() {
 	tc-export CC
 
 	MAKE_XOPTS=(
-		CC=$(tc-getCC)
+		CC="$(tc-getCC)"
 		CFLAGS="${CFLAGS}"
 		OPT="${CFLAGS}"
 	)


^ permalink raw reply related	[flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-biology/velvet/
@ 2024-05-08 10:45 Sam James
  0 siblings, 0 replies; 8+ messages in thread
From: Sam James @ 2024-05-08 10:45 UTC (permalink / raw
  To: gentoo-commits

commit:     db6cf7a1354743f4de574963a6d3cb409138896c
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Wed May  8 10:44:56 2024 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Wed May  8 10:45:15 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=db6cf7a1

sci-biology/velvet: fixup whitespace & openmp check

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-biology/velvet/velvet-1.2.10.ebuild | 27 ++++++++++++++++++---------
 1 file changed, 18 insertions(+), 9 deletions(-)

diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index bb1a0b441b1e..07b44eb65254 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
@@ -16,17 +16,26 @@ SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="doc openmp"
 
-BDEPEND="doc? ( virtual/latex-base )
-        openmp? (
-                || (
-                        sys-devel/gcc[openmp]
-                        sys-devel/clang-runtime[openmp]
-                )
-        )
+BDEPEND="
+	doc? ( virtual/latex-base )
+	openmp? (
+		|| (
+			sys-devel/gcc[openmp]
+			sys-devel/clang-runtime[openmp]
+		)
+	)
 "
 
 PATCHES=( "${FILESDIR}/${P}-incompatible-pointers.patch" )
 
+pkg_pretend() {
+	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
+pkg_setup() {
+	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
 src_prepare() {
 	default
 	if ! use doc; then
@@ -58,7 +67,7 @@ src_prepare() {
 		CFLAGS="${CFLAGS}"
 		OPT="${CFLAGS}"
 	)
-	use openmp && MAKE_XOPTS+=( OPENMP=1 ) && tc-check-openmp
+	use openmp && MAKE_XOPTS+=( OPENMP=1 )
 	[[ ! -z "${VELVET_MAXKMERLENGTH}" ]] && MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} )
 	[[ ! -z "${VELVET_CATEGORIES}" ]] && MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} )
 	[[ ! -z "${VELVET_BIGASSEMBLY}" ]] && MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} )


^ permalink raw reply related	[flat|nested] 8+ messages in thread
end of thread, other threads:[~2024-05-08 10:45 UTC | newest]

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