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* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2015-09-20  3:04 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2015-09-20  3:04 UTC (permalink / raw
  To: gentoo-commits

commit:     781fdf38053da604fcb269c354ad3cd86bd0e0ec
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 20 03:03:17 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Sep 20 03:04:09 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=781fdf38

sci-visualization/paraview: Only keep version 4.3.1

Package-Manager: portage-2.2.20.1

 sci-visualization/paraview/Manifest                |   2 -
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 ---
 .../files/paraview-4.0.1-removesqlite.patch        | 517 ---------------------
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 --
 .../paraview/files/paraview-4.0.1-vtknetcd.patch   |  79 ----
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 -
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 -
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ------------
 .../paraview/paraview-4.2.0-r1.ebuild              | 300 ------------
 9 files changed, 1339 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 98844ec..0ce9e37 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,3 +1 @@
-DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
-DIST ParaView-v4.2.0-source.tar.gz 50285547 SHA256 ac26cc5fe5ce82d27531727a01242353d40984826eaa580edea0791887a07b6b SHA512 611f641ccaa62b285c595df0318da94a9e0e67a1c3040f60c33bdd32bf980db8371c84958c9d5f3191cfd5249969a60f51f8e5dfa9bd234c96ec51caecdb37c8 WHIRLPOOL 1c81a95e00f06b3c60e31c82aa6e87979c6d9b8000ca7298904d8c3f09df58153f6dde7b96df5f538a991f5764862d3059d1395db61f12464306d3c3fe919fe7
 DIST ParaView-v4.3.1-source.tar.gz 50842525 SHA256 d534c475fc052215ecadf4ad19d9c7996c634b5d965951292b966710509a2542 SHA512 73c17f7ba757647869b26992c0ac3a6b9298bce9d2b8c2fca28286064f2b83a29753028a29c6f478654fffc96c9d9f5dd638c64df2b05ded425da122109d31e3 WHIRLPOOL 3db1d02db95acf16f29c4784714985e4f6f7a32fbdf7fa58ad85ecfaf6ab60d7959ea3d5a3ab5d36739e56f1ee5b025d9b6275749966b576324629f14e96bde0

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
deleted file mode 100644
index 6a09a1a..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
+++ /dev/null
@@ -1,72 +0,0 @@
-http://paraview.org/Bug/view.php?id=13656
-
-diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
---- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
-@@ -81,16 +81,24 @@
- #------------------------------------------------------------------------------
- # Generate the protbuf message file.
- #------------------------------------------------------------------------------
--get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	set (_PROTOC_COMPILER protoc)
-+	set (_PROTOC_DEPEND "")
-+else()
-+	set (_PROTOC_COMPILER protoc_compiler)
-+	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
-+endif()
-+
-+get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
- add_custom_command(
-     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
-            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
-     
--    COMMAND protoc_compiler
-+    COMMAND ${_PROTOC_COMPILER}
-            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
-            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
-            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
--    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
-+    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
-     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- )
- 
-@@ -109,5 +117,9 @@
- vtk_module_library(vtkPVServerImplementationCore
-   ${Module_SRCS})
- 
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
-+endif()
-+
- add_dependencies(vtkPVServerImplementationCore
-   protobuf_code_generation)
-diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
---- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
-@@ -34,7 +34,7 @@
- set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
- set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
- 
--vtk_module_third_party(protobuf
-+vtk_module_third_party(Protobuf
-   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
-   LIBRARIES protobuf
- )
-@@ -42,10 +42,12 @@
- # protobuf exports it's build-dir targets to a custom file
- # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
- # build-dir targets ourselves.
--vtk_target_export(protobuf)
--vtk_target_export(protobuf-lite)
--if (NOT CMAKE_CROSSCOMPILING)
--  vtk_compile_tools_target_export(protoc_compiler)
-+if (NOT VTK_USE_SYSTEM_PROTOBUF)
-+  vtk_target_export(protobuf)
-+  vtk_target_export(protobuf-lite)
-+  if (NOT CMAKE_CROSSCOMPILING)
-+    vtk_compile_tools_target_export(protoc_compiler)
-+  endif()
- endif()
- 
- # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
deleted file mode 100644
index be495b4..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
+++ /dev/null
@@ -1,517 +0,0 @@
-Description: Import patch from VTK to remove sqlite
-Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
-Last-Update: Mon Feb 11 14:58:03 UTC 2013
-
-remove the internal copy of sqlite (vtksqlite)
-http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
-
---- VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <vtksys/ios/fstream>
- #include <vtksys/ios/sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
---- VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <assert.h>
- 
-@@ -43,7 +43,7 @@
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -131,8 +131,8 @@
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -151,19 +151,19 @@
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -194,31 +194,31 @@
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -239,7 +239,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -259,7 +259,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -279,22 +279,22 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -315,7 +315,7 @@
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -326,12 +326,12 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -339,8 +339,8 @@
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -366,33 +366,33 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       vtksys_ios::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -423,11 +423,11 @@
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -451,7 +451,7 @@
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -463,11 +463,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -499,11 +499,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -647,11 +647,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -676,11 +676,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -705,12 +705,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -734,12 +734,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -763,17 +763,17 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -797,12 +797,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
---- VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
---- VTK/IO/SQL/vtkSQLiteQuery.h
-+++ VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
---- VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+set(vtksqlite_LIBRARIES sqlite3)
- vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
deleted file mode 100644
index 58ddde9..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
+++ /dev/null
@@ -1,36 +0,0 @@
---- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-+++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-@@ -82,6 +82,7 @@
-     FIND_PROGRAM( CG_COMPILER cgc
-       /usr/bin
-       /usr/local/bin
-+      /opt/nvidia-cg-toolkit/bin
-       DOC "The Cg Compiler"
-       )
-     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
-@@ -89,6 +90,7 @@
-     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
-       /usr/include
-       /usr/local/include
-+      /opt/nvidia-cg-toolkit/include
-       ${CG_COMPILER_SUPER_DIR}/include
-       DOC "The directory where Cg/cg.h resides"
-       )
-@@ -98,6 +100,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"
-@@ -108,6 +112,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
deleted file mode 100644
index a478b7d..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
+++ /dev/null
@@ -1,79 +0,0 @@
-adapted from debian patch need to be applied after paraview-3.14.1-removesqlite.patch
-
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
-@@ -1,8 +1,8 @@
--set(vtknetcdf_THIRD_PARTY 1)
--set(vtknetcdf_LIBRARIES vtkNetCDF vtkNetCDF_cxx)
--set(vtknetcdf_INCLUDE_DIRS
--  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
--  ${vtknetcdf_BINARY_DIR}/vtknetcdf
--  )
-+#set(vtknetcdf_THIRD_PARTY 1)
-+set(vtknetcdf_LIBRARIES netcdf netcdf_c++)
-+#set(vtknetcdf_INCLUDE_DIRS
-+#  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
-+#  ${vtknetcdf_BINARY_DIR}/vtknetcdf
-+#  )
- vtk_module_export_info()
--add_subdirectory(vtknetcdf)
-+#add_subdirectory(vtknetcdf)
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
-@@ -16,6 +16,6 @@
- #define __vtk_netcdf_h
- 
- /* Use the netcdf library configured for VTK.  */
--#include <vtknetcdf/include/netcdf.h>
-+#include <netcdf.h>
- 
- #endif
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
-@@ -16,6 +16,6 @@
- #define __vtk_netcdfcpp_h
- 
- /* Use the netcdf library configured for VTK.  */
--#include <vtknetcdf/cxx/netcdfcpp.h>
-+#include <netcdfcpp.h>
- 
- #endif
---- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
-@@ -21,7 +21,7 @@
-   )
- 
- add_executable(ExoIICTests ${ExoIICTests})
--target_link_libraries(ExoIICTests vtkCommon vtkexoIIc vtkNetCDF)
-+target_link_libraries(ExoIICTests vtkCommon vtkexoIIc netcdf)
- 
- set(TestsToRun ${ExoIICTests})
- remove(TestsToRun ExoIICTests.cxx)
---- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
-@@ -241,7 +241,7 @@
- 
- 
- VTK_ADD_LIBRARY(vtkexoIIc ${cbind_SRCS})
--TARGET_LINK_LIBRARIES(vtkexoIIc vtkNetCDF)
-+TARGET_LINK_LIBRARIES(vtkexoIIc netcdf)
- 
- IF(NOT VTK_INSTALL_NO_DEVELOPMENT)
- #  INSTALL_FILES(${VTK_INSTALL_INCLUDE_DIR}/vtkexodus2 .h
---- ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
-@@ -10,5 +10,5 @@
- 
- vtk_module_library(vtkIONetCDF ${Module_SRCS})
- 
--target_link_libraries(vtkIONetCDF vtkNetCDF_cxx)
-+target_link_libraries(vtkIONetCDF netcdf netcdf_c++)
- set_target_properties(vtkIONetCDF PROPERTIES LINK_INTERFACE_LIBRARIES "")
---- ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
-@@ -8,4 +8,4 @@
- 
- vtk_module_library(vtkIOParallelNetCDF ${Module_SRCS})
- 
--target_link_libraries(vtkIOParallelNetCDF vtkNetCDF_cxx)
-+target_link_libraries(vtkIOParallelNetCDF netcdf netcdf_c++)

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
deleted file mode 100644
index 65a5b20..0000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
-+++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
-@@ -28,5 +28,5 @@
- // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
- // the system
--//#define GLX_GLXEXT_LEGACY
-+#define GLX_GLXEXT_LEGACY
- #include "GL/glx.h"
- 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
deleted file mode 100644
index b7d3e40..0000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
-+++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
-@@ -1185,7 +1185,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1952,8 +1952,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
-+      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
deleted file mode 100644
index 20bed18..0000000
--- a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
+++ /dev/null
@@ -1,302 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S=${WORKDIR}/${MY_P%-source}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
-		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
-		"${FILESDIR}"/${P}-glxext-legacy.patch \
-		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}

diff --git a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
deleted file mode 100644
index 7777925..0000000
--- a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
+++ /dev/null
@@ -1,300 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${P}-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${P}-protobuf.patch \
-		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2015-09-20  4:02 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2015-09-20  4:02 UTC (permalink / raw
  To: gentoo-commits

commit:     2d35dd5128f6e72d52a9077aad9614b5d1d12efa
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 20 03:25:16 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Sep 20 03:25:16 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2d35dd51

sci-visualization/paraview: Version bump to 4.4.0

Package-Manager: portage-2.2.20.1

 sci-visualization/paraview/Manifest                |   1 +
 .../files/paraview-4.4.0-removesqlite.patch        | 550 +++++++++++++++++++++
 sci-visualization/paraview/paraview-4.4.0.ebuild   | 300 +++++++++++
 3 files changed, 851 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 0ce9e37..011c260 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1 +1,2 @@
 DIST ParaView-v4.3.1-source.tar.gz 50842525 SHA256 d534c475fc052215ecadf4ad19d9c7996c634b5d965951292b966710509a2542 SHA512 73c17f7ba757647869b26992c0ac3a6b9298bce9d2b8c2fca28286064f2b83a29753028a29c6f478654fffc96c9d9f5dd638c64df2b05ded425da122109d31e3 WHIRLPOOL 3db1d02db95acf16f29c4784714985e4f6f7a32fbdf7fa58ad85ecfaf6ab60d7959ea3d5a3ab5d36739e56f1ee5b025d9b6275749966b576324629f14e96bde0
+DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b

diff --git a/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch
new file mode 100644
index 0000000..6016b8d
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.4.0-removesqlite.patch
@@ -0,0 +1,550 @@
+diff --git a/VTK/IO/SQL/CMakeLists.txt b/VTK/IO/SQL/CMakeLists.txt
+index a62a0b3..25089d9 100644
+--- a/VTK/IO/SQL/CMakeLists.txt
++++ b/VTK/IO/SQL/CMakeLists.txt
+@@ -28,3 +28,4 @@ set_source_files_properties(
+   )
+ 
+ vtk_module_library(vtkIOSQL ${Module_SRCS} ${SQLite_SRCS})
++target_link_libraries(vtkIOSQL -lsqlite3)
+diff --git a/VTK/IO/SQL/module.cmake b/VTK/IO/SQL/module.cmake
+index f00bfd0..db7792f 100644
+--- a/VTK/IO/SQL/module.cmake
++++ b/VTK/IO/SQL/module.cmake
+@@ -5,7 +5,7 @@ vtk_module(vtkIOSQL
+     vtkIOCore
+   PRIVATE_DEPENDS
+     vtksys
+-    vtksqlite # We should consider splitting this into a module.
++#   vtksqlite # We should consider splitting this into a module.
+   TEST_DEPENDS
+     vtkIOLegacy
+     vtkTestingIOSQL
+diff --git a/VTK/IO/SQL/vtkSQLiteDatabase.cxx b/VTK/IO/SQL/vtkSQLiteDatabase.cxx
+index 8651670..07acfc2 100644
+--- a/VTK/IO/SQL/vtkSQLiteDatabase.cxx
++++ b/VTK/IO/SQL/vtkSQLiteDatabase.cxx
+@@ -29,7 +29,7 @@
+ #include <fstream>
+ #include <sstream>
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ vtkStandardNewMacro(vtkSQLiteDatabase);
+ 
+@@ -307,15 +307,15 @@ bool vtkSQLiteDatabase::Open(const char* password, int mode)
+       }
+     }
+ 
+-  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
++  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
+ 
+-  if (result != VTK_SQLITE_OK)
++  if (result != SQLITE_OK)
+     {
+     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
+                   << result << " and message is "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+ 
+-    vtk_sqlite3_close(this->SQLiteInstance);
++    sqlite3_close(this->SQLiteInstance);
+     return false;
+     }
+   else
+@@ -334,8 +334,8 @@ void vtkSQLiteDatabase::Close()
+     }
+   else
+     {
+-    int result = vtk_sqlite3_close(this->SQLiteInstance);
+-    if (result != VTK_SQLITE_OK)
++    int result = sqlite3_close(this->SQLiteInstance);
++    if (result != SQLITE_OK)
+       {
+       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
+       }
+@@ -374,7 +374,7 @@ vtkStringArray * vtkSQLiteDatabase::GetTables()
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetTables(): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return this->Tables;
+     }
+@@ -403,7 +403,7 @@ vtkStringArray * vtkSQLiteDatabase::GetRecord(const char *table)
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return NULL;
+     }
+@@ -467,10 +467,10 @@ bool vtkSQLiteDatabase::ParseURL(const char* URL)
+ // ----------------------------------------------------------------------
+ bool vtkSQLiteDatabase::HasError()
+ {
+-  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
++  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
+ }
+ 
+ const char* vtkSQLiteDatabase::GetLastErrorText()
+ {
+-  return vtk_sqlite3_errmsg(this->SQLiteInstance);
++  return sqlite3_errmsg(this->SQLiteInstance);
+ }
+diff --git a/VTK/IO/SQL/vtkSQLiteDatabase.h b/VTK/IO/SQL/vtkSQLiteDatabase.h
+index 640355a..3e8cd57 100644
+--- a/VTK/IO/SQL/vtkSQLiteDatabase.h
++++ b/VTK/IO/SQL/vtkSQLiteDatabase.h
+@@ -49,7 +49,7 @@
+ class vtkSQLQuery;
+ class vtkSQLiteQuery;
+ class vtkStringArray;
+-struct vtk_sqlite3;
++struct sqlite3;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
+ {
+@@ -147,7 +147,7 @@ protected:
+   virtual bool ParseURL(const char* url);
+ 
+ private:
+-  vtk_sqlite3 *SQLiteInstance;
++  sqlite3 *SQLiteInstance;
+ 
+   // We want this to be private, a user of this class
+   // should not be setting this for any reason
+diff --git a/VTK/IO/SQL/vtkSQLiteQuery.cxx b/VTK/IO/SQL/vtkSQLiteQuery.cxx
+index 31a15f1..ea12405 100644
+--- a/VTK/IO/SQL/vtkSQLiteQuery.cxx
++++ b/VTK/IO/SQL/vtkSQLiteQuery.cxx
+@@ -25,7 +25,7 @@
+ #include "vtkVariant.h"
+ #include "vtkVariantArray.h"
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ #include <cassert>
+ 
+@@ -43,7 +43,7 @@ vtkSQLiteQuery::vtkSQLiteQuery()
+ {
+   this->Statement = NULL;
+   this->InitialFetch = true;
+-  this->InitialFetchResult=VTK_SQLITE_DONE;
++  this->InitialFetchResult=SQLITE_DONE;
+   this->LastErrorText = NULL;
+   this->TransactionInProgress = false;
+ }
+@@ -61,7 +61,7 @@ vtkSQLiteQuery::~vtkSQLiteQuery()
+     {
+     if (this->Database != NULL)
+       {
+-      vtk_sqlite3_finalize(this->Statement);
++      sqlite3_finalize(this->Statement);
+       this->Statement = NULL;
+       }
+     }
+@@ -128,8 +128,8 @@ bool vtkSQLiteQuery::SetQuery(const char *newQuery)
+   if (this->Statement)
+     {
+     vtkDebugMacro(<<"Finalizing old statement");
+-    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
+-    if (finalizeStatus != VTK_SQLITE_OK)
++    int finalizeStatus = sqlite3_finalize(this->Statement);
++    if (finalizeStatus != SQLITE_OK)
+       {
+       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
+                       << finalizeStatus);
+@@ -148,19 +148,19 @@ bool vtkSQLiteQuery::SetQuery(const char *newQuery)
+       return false;
+       }
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+     const char *unused_statement;
+ 
+-    int prepareStatus = vtk_sqlite3_prepare_v2(db,
++    int prepareStatus = sqlite3_prepare_v2(db,
+                                                this->Query,
+                                                static_cast<int>(strlen(this->Query)),
+                                                &this->Statement,
+                                                &unused_statement);
+ 
+-    if (prepareStatus != VTK_SQLITE_OK)
++    if (prepareStatus != SQLITE_OK)
+       {
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
++      this->SetLastErrorText(sqlite3_errmsg(db));
++      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
+                     << this->GetLastErrorText()
+                     << " on statement: '"
+                     << this->Query << "'");
+@@ -191,31 +191,31 @@ bool vtkSQLiteQuery::Execute()
+     }
+   else
+     {
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   vtkDebugMacro(<<"Execute(): Query ready to execute.");
+ 
+   this->InitialFetch = true;
+-  int result = vtk_sqlite3_step(this->Statement);
++  int result = sqlite3_step(this->Statement);
+   this->InitialFetchResult = result;
+ 
+-  if (result == VTK_SQLITE_DONE)
++  if (result == SQLITE_DONE)
+     {
+     this->SetLastErrorText(NULL);
+     this->Active = true;
+     return true;
+     }
+-  else if (result != VTK_SQLITE_ROW)
++  else if (result != SQLITE_ROW)
+     {
+     vtkSQLiteDatabase *dbContainer =
+       vtkSQLiteDatabase::SafeDownCast(this->Database);
+     assert(dbContainer != NULL);
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+ 
+-    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
++    this->SetLastErrorText(sqlite3_errmsg(db));
++    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
+                   << this->GetLastErrorText());
+     this->Active = false;
+     return false;
+@@ -236,7 +236,7 @@ int vtkSQLiteQuery::GetNumberOfFields()
+     }
+   else
+     {
+-    return vtk_sqlite3_column_count(this->Statement);
++    return sqlite3_column_count(this->Statement);
+     }
+ }
+ 
+@@ -256,7 +256,7 @@ const char * vtkSQLiteQuery::GetFieldName(int column)
+     }
+   else
+     {
+-    return vtk_sqlite3_column_name(this->Statement, column);
++    return sqlite3_column_name(this->Statement, column);
+     }
+ }
+ 
+@@ -276,22 +276,22 @@ int vtkSQLiteQuery::GetFieldType(int column)
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
++      case SQLITE_INTEGER:
+         return VTK_INT;
+-      case VTK_SQLITE_FLOAT:
++      case SQLITE_FLOAT:
+         return VTK_FLOAT;
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+         return VTK_STRING;
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+         return VTK_STRING; // until we have a BLOB type of our own
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+         return VTK_VOID; // ??? what makes sense here?
+       default:
+       {
+       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
+-                    << vtk_sqlite3_column_type(this->Statement, column)
++                    << sqlite3_column_type(this->Statement, column)
+                     <<" from SQLite.");
+       return VTK_VOID;
+       }
+@@ -312,7 +312,7 @@ bool vtkSQLiteQuery::NextRow()
+     {
+     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
+     this->InitialFetch = false;
+-    if (this->InitialFetchResult == VTK_SQLITE_DONE)
++    if (this->InitialFetchResult == SQLITE_DONE)
+       {
+       return false;
+       }
+@@ -323,12 +323,12 @@ bool vtkSQLiteQuery::NextRow()
+     }
+   else
+     {
+-    int result = vtk_sqlite3_step(this->Statement);
+-    if (result == VTK_SQLITE_DONE)
++    int result = sqlite3_step(this->Statement);
++    if (result == SQLITE_DONE)
+       {
+       return false;
+       }
+-    else if (result == VTK_SQLITE_ROW)
++    else if (result == SQLITE_ROW)
+       {
+       return true;
+       }
+@@ -336,8 +336,8 @@ bool vtkSQLiteQuery::NextRow()
+       {
+       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+       assert(dbContainer != NULL);
+-      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
++      sqlite3 *db = dbContainer->SQLiteInstance;
++      this->SetLastErrorText(sqlite3_errmsg(db));
+       vtkErrorMacro(<<"NextRow(): Database returned error code "
+                     << result << " with the following message: "
+                     << this->GetLastErrorText());
+@@ -363,33 +363,33 @@ vtkVariant vtkSQLiteQuery::DataValue(vtkIdType column)
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
+-        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
++      case SQLITE_INTEGER:
++        return vtkVariant(sqlite3_column_int(this->Statement, column));
+ 
+-      case VTK_SQLITE_FLOAT:
+-        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
++      case SQLITE_FLOAT:
++        return vtkVariant(sqlite3_column_double(this->Statement, column));
+ 
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+       {
+       std::ostringstream str;
+-      str << vtk_sqlite3_column_text(this->Statement, column);
++      str << sqlite3_column_text(this->Statement, column);
+       return vtkVariant(vtkStdString(str.str()));
+       }
+ 
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+       {
+       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
+       // byte count, we ensure that the string will store all of the BLOB's bytes,
+       // even if there are NULL values.
+ 
+       return vtkVariant(vtkStdString(
+-        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
+-        vtk_sqlite3_column_bytes(this->Statement, column)));
++        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
++        sqlite3_column_bytes(this->Statement, column)));
+       }
+ 
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+       default:
+         return vtkVariant();
+       }
+@@ -420,11 +420,11 @@ bool vtkSQLiteQuery::BeginTransaction()
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+ 
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = true;
+     this->SetLastErrorText(NULL);
+@@ -448,7 +448,7 @@ bool vtkSQLiteQuery::CommitTransaction()
+ {
+   if (this->Statement)
+     {
+-    vtk_sqlite3_finalize(this->Statement);
++    sqlite3_finalize(this->Statement);
+     this->Statement = NULL;
+     }
+ 
+@@ -460,11 +460,11 @@ bool vtkSQLiteQuery::CommitTransaction()
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -496,11 +496,11 @@ bool vtkSQLiteQuery::RollbackTransaction()
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -644,11 +644,11 @@ bool vtkSQLiteQuery::BindIntegerParameter(int index, int value)
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
++  int status = sqlite3_bind_int(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_bind_int returned error: " << status;
+@@ -673,11 +673,11 @@ bool vtkSQLiteQuery::BindInt64Parameter(int index, vtkTypeInt64 value)
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
++  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_bind_int64 returned error: " << status;
+@@ -702,12 +702,12 @@ bool vtkSQLiteQuery::BindDoubleParameter(int index, double value)
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
++  int status = sqlite3_bind_double(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_bind_double returned error: " << status;
+@@ -731,12 +731,12 @@ bool vtkSQLiteQuery::BindStringParameter(int index, const char *value, int lengt
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
++  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_bind_text returned error: " << status;
+@@ -760,17 +760,17 @@ bool vtkSQLiteQuery::BindBlobParameter(int index, const void *data, int length)
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   int status =
+-    vtk_sqlite3_bind_blob(this->Statement,
++    sqlite3_bind_blob(this->Statement,
+                           index+1,
+                           data,
+                           length,
+-                          VTK_SQLITE_TRANSIENT);
++                          SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_bind_blob returned error: " << status;
+@@ -794,12 +794,12 @@ bool vtkSQLiteQuery::ClearParameterBindings()
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_clear_bindings(this->Statement);
++  int status = sqlite3_clear_bindings(this->Statement);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     std::ostringstream errormessage;
+     errormessage << "sqlite_clear_bindings returned error: " << status;
+diff --git a/VTK/IO/SQL/vtkSQLiteQuery.h b/VTK/IO/SQL/vtkSQLiteQuery.h
+index bfab39a..db4deb4 100644
+--- a/VTK/IO/SQL/vtkSQLiteQuery.h
++++ b/VTK/IO/SQL/vtkSQLiteQuery.h
+@@ -47,7 +47,7 @@
+ class vtkSQLiteDatabase;
+ class vtkVariant;
+ class vtkVariantArray;
+-struct vtk_sqlite3_stmt;
++struct sqlite3_stmt;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
+ {
+@@ -155,7 +155,7 @@ private:
+   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
+   void operator=(const vtkSQLiteQuery &); // Not implemented.
+ 
+-  vtk_sqlite3_stmt *Statement;
++  sqlite3_stmt *Statement;
+   bool InitialFetch;
+   int InitialFetchResult;
+   char *LastErrorText;
+diff --git a/VTK/ThirdParty/sqlite/CMakeLists.txt b/VTK/ThirdParty/sqlite/CMakeLists.txt
+index 9e1c067..a55764b 100644
+--- a/VTK/ThirdParty/sqlite/CMakeLists.txt
++++ b/VTK/ThirdParty/sqlite/CMakeLists.txt
+@@ -1,4 +1,4 @@
+-set(vtksqlite_THIRD_PARTY 1)
+-set(vtksqlite_LIBRARIES vtksqlite)
+-vtk_module_export_info()
+-add_subdirectory(vtksqlite)
++#set(vtksqlite_THIRD_PARTY 1)
++#set(vtksqlite_LIBRARIES sqlite3)
++#vtk_module_export_info()
++#add_subdirectory(vtksqlite)
+diff --git a/VTK/ThirdParty/sqlite/module.cmake b/VTK/ThirdParty/sqlite/module.cmake
+index 8dbb3a7..db837c5 100644
+--- a/VTK/ThirdParty/sqlite/module.cmake
++++ b/VTK/ThirdParty/sqlite/module.cmake
+@@ -1 +1 @@
+-vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)
++#vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)

diff --git a/sci-visualization/paraview/paraview-4.4.0.ebuild b/sci-visualization/paraview/paraview-4.4.0.ebuild
new file mode 100644
index 0000000..21ac4ab
--- /dev/null
+++ b/sci-visualization/paraview/paraview-4.4.0.ebuild
@@ -0,0 +1,300 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils multilib versionator python-single-r1 cmake-utils
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}-source"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	>=dev-libs/jsoncpp-0.10.1
+	dev-libs/libxml2:2
+	dev-libs/protobuf
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	>=x11-libs/gl2ps-1.3.8
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt4
+			dev-qt/qtgui:4
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py )
+		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt4? (
+		dev-qt/designer:4
+		dev-qt/qtgui:4
+		dev-qt/qtopengl:4
+		dev-qt/qthelp:4[compat]
+		dev-qt/qtsql:4
+		dev-qt/qtwebkit:4
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	${PYTHON_DEPS}
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	# see patch headers for description
+	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
+		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${PN}-4.2.0-protobuf.patch \
+		"${FILESDIR}"/${PN}-4.3.1-fix-development-install.patch \
+		"${FILESDIR}"/${PN}-4.3.1-protobuf-2.6.patch \
+		"${FILESDIR}"/${P}-removesqlite.patch
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		Plugins/SciberQuestToolKit/CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
+		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
+		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	local mysql_lib mysql_includedir
+
+	if use mysql ; then
+		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
+			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
+			mysql_includedir="/usr/include/mysql"
+		else
+			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
+			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
+		fi
+	fi
+
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
+		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt4 Module_vtkRenderingQt)
+		$(cmake-utils_use qt4 Module_vtkViewsQt)
+		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt4 VTK_Group_Qt)
+		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use qt4 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+pkg_postinst() {
+	# with Qt4.5 there seem to be issues reading data files
+	# under certain locales. Setting LC_ALL=C should fix these.
+	elog ""
+	elog "If you experience data corruption during parsing of"
+	elog "data files with paraview please try setting your"
+	elog "locale to LC_ALL=C."
+	elog "If you plan to use paraview component from an existing shell"
+	elog "you should run env-update and . /etc/profile first"
+	elog ""
+	elog "paraview no longer exports bundled python modules in PYTHONPATH"
+	elog "globally due to clashes of bundled packages with system-wide"
+	elog "site-packages. If you want to use paraview's python modules"
+	elog "export"
+	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
+	elog "as needed."
+}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2015-09-20  6:56 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2015-09-20  6:56 UTC (permalink / raw
  To: gentoo-commits

commit:     96b0c167e73c6230e4e77336b9e8bb602a8c5c04
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 20 06:53:39 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Sep 20 06:56:20 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=96b0c167

Revert "sci-visualization/paraview: Only keep version 4.3.1"

This reverts commit 781fdf38053da604fcb269c354ad3cd86bd0e0ec.

Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   2 +
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 +++
 .../files/paraview-4.0.1-removesqlite.patch        | 517 +++++++++++++++++++++
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 ++
 .../paraview/files/paraview-4.0.1-vtknetcd.patch   |  79 ++++
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 +
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 +
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ++++++++++++
 .../paraview/paraview-4.2.0-r1.ebuild              | 300 ++++++++++++
 9 files changed, 1339 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 011c260..4b660f9 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1,4 @@
+DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
+DIST ParaView-v4.2.0-source.tar.gz 50285547 SHA256 ac26cc5fe5ce82d27531727a01242353d40984826eaa580edea0791887a07b6b SHA512 611f641ccaa62b285c595df0318da94a9e0e67a1c3040f60c33bdd32bf980db8371c84958c9d5f3191cfd5249969a60f51f8e5dfa9bd234c96ec51caecdb37c8 WHIRLPOOL 1c81a95e00f06b3c60e31c82aa6e87979c6d9b8000ca7298904d8c3f09df58153f6dde7b96df5f538a991f5764862d3059d1395db61f12464306d3c3fe919fe7
 DIST ParaView-v4.3.1-source.tar.gz 50842525 SHA256 d534c475fc052215ecadf4ad19d9c7996c634b5d965951292b966710509a2542 SHA512 73c17f7ba757647869b26992c0ac3a6b9298bce9d2b8c2fca28286064f2b83a29753028a29c6f478654fffc96c9d9f5dd638c64df2b05ded425da122109d31e3 WHIRLPOOL 3db1d02db95acf16f29c4784714985e4f6f7a32fbdf7fa58ad85ecfaf6ab60d7959ea3d5a3ab5d36739e56f1ee5b025d9b6275749966b576324629f14e96bde0
 DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
new file mode 100644
index 0000000..6a09a1a
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
@@ -0,0 +1,72 @@
+http://paraview.org/Bug/view.php?id=13656
+
+diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
+--- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
+@@ -81,16 +81,24 @@
+ #------------------------------------------------------------------------------
+ # Generate the protbuf message file.
+ #------------------------------------------------------------------------------
+-get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
++if (VTK_USE_SYSTEM_PROTOBUF)
++	set (_PROTOC_COMPILER protoc)
++	set (_PROTOC_DEPEND "")
++else()
++	set (_PROTOC_COMPILER protoc_compiler)
++	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
++endif()
++
++get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
+ add_custom_command(
+     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
+            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
+     
+-    COMMAND protoc_compiler
++    COMMAND ${_PROTOC_COMPILER}
+            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
+            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
+            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
+-    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
++    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
+     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ )
+ 
+@@ -109,5 +117,9 @@
+ vtk_module_library(vtkPVServerImplementationCore
+   ${Module_SRCS})
+ 
++if (VTK_USE_SYSTEM_PROTOBUF)
++	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
++endif()
++
+ add_dependencies(vtkPVServerImplementationCore
+   protobuf_code_generation)
+diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
+--- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
++++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
+@@ -34,7 +34,7 @@
+ set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
+ set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
+ 
+-vtk_module_third_party(protobuf
++vtk_module_third_party(Protobuf
+   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
+   LIBRARIES protobuf
+ )
+@@ -42,10 +42,12 @@
+ # protobuf exports it's build-dir targets to a custom file
+ # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
+ # build-dir targets ourselves.
+-vtk_target_export(protobuf)
+-vtk_target_export(protobuf-lite)
+-if (NOT CMAKE_CROSSCOMPILING)
+-  vtk_compile_tools_target_export(protoc_compiler)
++if (NOT VTK_USE_SYSTEM_PROTOBUF)
++  vtk_target_export(protobuf)
++  vtk_target_export(protobuf-lite)
++  if (NOT CMAKE_CROSSCOMPILING)
++    vtk_compile_tools_target_export(protoc_compiler)
++  endif()
+ endif()
+ 
+ # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
new file mode 100644
index 0000000..be495b4
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
@@ -0,0 +1,517 @@
+Description: Import patch from VTK to remove sqlite
+Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
+Last-Update: Mon Feb 11 14:58:03 UTC 2013
+
+remove the internal copy of sqlite (vtksqlite)
+http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
+
+--- VTK/IO/SQL/vtkSQLiteDatabase.cxx
++++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
+@@ -29,7 +29,7 @@
+ #include <vtksys/ios/fstream>
+ #include <vtksys/ios/sstream>
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ vtkStandardNewMacro(vtkSQLiteDatabase);
+ 
+@@ -307,15 +307,15 @@
+       }
+     }
+ 
+-  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
++  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
+ 
+-  if (result != VTK_SQLITE_OK)
++  if (result != SQLITE_OK)
+     {
+     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
+                   << result << " and message is "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+ 
+-    vtk_sqlite3_close(this->SQLiteInstance);
++    sqlite3_close(this->SQLiteInstance);
+     return false;
+     }
+   else
+@@ -334,8 +334,8 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_close(this->SQLiteInstance);
+-    if (result != VTK_SQLITE_OK)
++    int result = sqlite3_close(this->SQLiteInstance);
++    if (result != SQLITE_OK)
+       {
+       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
+       }
+@@ -374,7 +374,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetTables(): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return this->Tables;
+     }
+@@ -403,7 +403,7 @@
+   if (!status)
+     {
+     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
+-                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
++                  << sqlite3_errmsg(this->SQLiteInstance) );
+     query->Delete();
+     return NULL;
+     }
+@@ -467,10 +467,10 @@
+ // ----------------------------------------------------------------------
+ bool vtkSQLiteDatabase::HasError()
+ {
+-  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
++  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
+ }
+ 
+ const char* vtkSQLiteDatabase::GetLastErrorText()
+ {
+-  return vtk_sqlite3_errmsg(this->SQLiteInstance);
++  return sqlite3_errmsg(this->SQLiteInstance);
+ }
+--- VTK/IO/SQL/vtkSQLiteQuery.cxx
++++ VTK/IO/SQL/vtkSQLiteQuery.cxx
+@@ -25,7 +25,7 @@
+ #include "vtkVariant.h"
+ #include "vtkVariantArray.h"
+ 
+-#include <vtksqlite/vtk_sqlite3.h>
++#include <sqlite3.h>
+ 
+ #include <assert.h>
+ 
+@@ -43,7 +43,7 @@
+ {
+   this->Statement = NULL;
+   this->InitialFetch = true;
+-  this->InitialFetchResult=VTK_SQLITE_DONE;
++  this->InitialFetchResult=SQLITE_DONE;
+   this->LastErrorText = NULL;
+   this->TransactionInProgress = false;
+ }
+@@ -61,7 +61,7 @@
+     {
+     if (this->Database != NULL)
+       {
+-      vtk_sqlite3_finalize(this->Statement);
++      sqlite3_finalize(this->Statement);
+       this->Statement = NULL;
+       }
+     }
+@@ -131,8 +131,8 @@
+   if (this->Statement)
+     {
+     vtkDebugMacro(<<"Finalizing old statement");
+-    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
+-    if (finalizeStatus != VTK_SQLITE_OK)
++    int finalizeStatus = sqlite3_finalize(this->Statement);
++    if (finalizeStatus != SQLITE_OK)
+       {
+       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
+                       << finalizeStatus);
+@@ -151,19 +151,19 @@
+       return false;
+       }
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+     const char *unused_statement;
+ 
+-    int prepareStatus = vtk_sqlite3_prepare_v2(db,
++    int prepareStatus = sqlite3_prepare_v2(db,
+                                                this->Query,
+                                                static_cast<int>(strlen(this->Query)),
+                                                &this->Statement,
+                                                &unused_statement);
+ 
+-    if (prepareStatus != VTK_SQLITE_OK)
++    if (prepareStatus != SQLITE_OK)
+       {
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
++      this->SetLastErrorText(sqlite3_errmsg(db));
++      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
+                     << this->GetLastErrorText()
+                     << " on statement: '"
+                     << this->Query << "'");
+@@ -194,31 +194,31 @@
+     }
+   else
+     {
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   vtkDebugMacro(<<"Execute(): Query ready to execute.");
+ 
+   this->InitialFetch = true;
+-  int result = vtk_sqlite3_step(this->Statement);
++  int result = sqlite3_step(this->Statement);
+   this->InitialFetchResult = result;
+ 
+-  if (result == VTK_SQLITE_DONE)
++  if (result == SQLITE_DONE)
+     {
+     this->SetLastErrorText(NULL);
+     this->Active = true;
+     return true;
+     }
+-  else if (result != VTK_SQLITE_ROW)
++  else if (result != SQLITE_ROW)
+     {
+     vtkSQLiteDatabase *dbContainer =
+       vtkSQLiteDatabase::SafeDownCast(this->Database);
+     assert(dbContainer != NULL);
+ 
+-    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++    sqlite3 *db = dbContainer->SQLiteInstance;
+ 
+-    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
+-    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
++    this->SetLastErrorText(sqlite3_errmsg(db));
++    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
+                   << this->GetLastErrorText());
+     this->Active = false;
+     return false;
+@@ -239,7 +239,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_count(this->Statement);
++    return sqlite3_column_count(this->Statement);
+     }
+ }
+ 
+@@ -259,7 +259,7 @@
+     }
+   else
+     {
+-    return vtk_sqlite3_column_name(this->Statement, column);
++    return sqlite3_column_name(this->Statement, column);
+     }
+ }
+ 
+@@ -279,22 +279,22 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
++      case SQLITE_INTEGER:
+         return VTK_INT;
+-      case VTK_SQLITE_FLOAT:
++      case SQLITE_FLOAT:
+         return VTK_FLOAT;
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+         return VTK_STRING;
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+         return VTK_STRING; // until we have a BLOB type of our own
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+         return VTK_VOID; // ??? what makes sense here?
+       default:
+       {
+       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
+-                    << vtk_sqlite3_column_type(this->Statement, column)
++                    << sqlite3_column_type(this->Statement, column)
+                     <<" from SQLite.");
+       return VTK_VOID;
+       }
+@@ -315,7 +315,7 @@
+     {
+     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
+     this->InitialFetch = false;
+-    if (this->InitialFetchResult == VTK_SQLITE_DONE)
++    if (this->InitialFetchResult == SQLITE_DONE)
+       {
+       return false;
+       }
+@@ -326,12 +326,12 @@
+     }
+   else
+     {
+-    int result = vtk_sqlite3_step(this->Statement);
+-    if (result == VTK_SQLITE_DONE)
++    int result = sqlite3_step(this->Statement);
++    if (result == SQLITE_DONE)
+       {
+       return false;
+       }
+-    else if (result == VTK_SQLITE_ROW)
++    else if (result == SQLITE_ROW)
+       {
+       return true;
+       }
+@@ -339,8 +339,8 @@
+       {
+       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+       assert(dbContainer != NULL);
+-      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
+-      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
++      sqlite3 *db = dbContainer->SQLiteInstance;
++      this->SetLastErrorText(sqlite3_errmsg(db));
+       vtkErrorMacro(<<"NextRow(): Database returned error code "
+                     << result << " with the following message: "
+                     << this->GetLastErrorText());
+@@ -366,33 +366,33 @@
+     }
+   else
+     {
+-    switch (vtk_sqlite3_column_type(this->Statement, column))
++    switch (sqlite3_column_type(this->Statement, column))
+       {
+-      case VTK_SQLITE_INTEGER:
+-        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
++      case SQLITE_INTEGER:
++        return vtkVariant(sqlite3_column_int(this->Statement, column));
+ 
+-      case VTK_SQLITE_FLOAT:
+-        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
++      case SQLITE_FLOAT:
++        return vtkVariant(sqlite3_column_double(this->Statement, column));
+ 
+-      case VTK_SQLITE_TEXT:
++      case SQLITE_TEXT:
+       {
+       vtksys_ios::ostringstream str;
+-      str << vtk_sqlite3_column_text(this->Statement, column);
++      str << sqlite3_column_text(this->Statement, column);
+       return vtkVariant(vtkStdString(str.str()));
+       }
+ 
+-      case VTK_SQLITE_BLOB:
++      case SQLITE_BLOB:
+       {
+       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
+       // byte count, we ensure that the string will store all of the BLOB's bytes,
+       // even if there are NULL values.
+ 
+       return vtkVariant(vtkStdString(
+-        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
+-        vtk_sqlite3_column_bytes(this->Statement, column)));
++        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
++        sqlite3_column_bytes(this->Statement, column)));
+       }
+ 
+-      case VTK_SQLITE_NULL:
++      case SQLITE_NULL:
+       default:
+         return vtkVariant();
+       }
+@@ -423,11 +423,11 @@
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+ 
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = true;
+     this->SetLastErrorText(NULL);
+@@ -451,7 +451,7 @@
+ {
+   if (this->Statement)
+     {
+-    vtk_sqlite3_finalize(this->Statement);
++    sqlite3_finalize(this->Statement);
+     this->Statement = NULL;
+     }
+ 
+@@ -463,11 +463,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -499,11 +499,11 @@
+ 
+   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
+   assert(dbContainer != NULL);
+-  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
++  sqlite3 *db = dbContainer->SQLiteInstance;
+   char *errorMessage = NULL;
+-  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
++  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
+ 
+-  if (result == VTK_SQLITE_OK)
++  if (result == SQLITE_OK)
+     {
+     this->TransactionInProgress = false;
+     this->SetLastErrorText(NULL);
+@@ -647,11 +647,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
++  int status = sqlite3_bind_int(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int returned error: " << status;
+@@ -676,11 +676,11 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+-  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
++  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_int64 returned error: " << status;
+@@ -705,12 +705,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
++  int status = sqlite3_bind_double(this->Statement, index+1, value);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_double returned error: " << status;
+@@ -734,12 +734,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
++  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_text returned error: " << status;
+@@ -763,17 +763,17 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+   int status =
+-    vtk_sqlite3_bind_blob(this->Statement,
++    sqlite3_bind_blob(this->Statement,
+                           index+1,
+                           data,
+                           length,
+-                          VTK_SQLITE_TRANSIENT);
++                          SQLITE_TRANSIENT);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_bind_blob returned error: " << status;
+@@ -797,12 +797,12 @@
+   if (this->Active)
+     {
+     this->Active = false;
+-    vtk_sqlite3_reset(this->Statement);
++    sqlite3_reset(this->Statement);
+     }
+ 
+-  int status = vtk_sqlite3_clear_bindings(this->Statement);
++  int status = sqlite3_clear_bindings(this->Statement);
+ 
+-  if (status != VTK_SQLITE_OK)
++  if (status != SQLITE_OK)
+     {
+     vtksys_ios::ostringstream errormessage;
+     errormessage << "sqlite_clear_bindings returned error: " << status;
+--- VTK/IO/SQL/vtkSQLiteDatabase.h
++++ VTK/IO/SQL/vtkSQLiteDatabase.h
+@@ -49,7 +49,7 @@
+ class vtkSQLQuery;
+ class vtkSQLiteQuery;
+ class vtkStringArray;
+-struct vtk_sqlite3;
++struct sqlite3;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
+ {
+@@ -147,7 +147,7 @@
+   virtual bool ParseURL(const char* url);
+ 
+ private:
+-  vtk_sqlite3 *SQLiteInstance;
++  sqlite3 *SQLiteInstance;
+ 
+   // We want this to be private, a user of this class
+   // should not be setting this for any reason
+--- VTK/IO/SQL/vtkSQLiteQuery.h
++++ VTK/IO/SQL/vtkSQLiteQuery.h
+@@ -47,7 +47,7 @@
+ class vtkSQLiteDatabase;
+ class vtkVariant;
+ class vtkVariantArray;
+-struct vtk_sqlite3_stmt;
++struct sqlite3_stmt;
+ 
+ class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
+ {
+@@ -155,7 +155,7 @@
+   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
+   void operator=(const vtkSQLiteQuery &); // Not implemented.
+ 
+-  vtk_sqlite3_stmt *Statement;
++  sqlite3_stmt *Statement;
+   bool InitialFetch;
+   int InitialFetchResult;
+   char *LastErrorText;
+--- VTK/ThirdParty/sqlite/CMakeLists.txt
++++ VTK/ThirdParty/sqlite/CMakeLists.txt
+@@ -1,4 +1,4 @@
+-set(vtksqlite_THIRD_PARTY 1)
+-set(vtksqlite_LIBRARIES vtksqlite)
++#set(vtksqlite_THIRD_PARTY 1)
++set(vtksqlite_LIBRARIES sqlite3)
+ vtk_module_export_info()
+-add_subdirectory(vtksqlite)
++#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
new file mode 100644
index 0000000..58ddde9
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
@@ -0,0 +1,36 @@
+--- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
++++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
+@@ -82,6 +82,7 @@
+     FIND_PROGRAM( CG_COMPILER cgc
+       /usr/bin
+       /usr/local/bin
++      /opt/nvidia-cg-toolkit/bin
+       DOC "The Cg Compiler"
+       )
+     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
+@@ -89,6 +90,7 @@
+     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
+       /usr/include
+       /usr/local/include
++      /opt/nvidia-cg-toolkit/include
+       ${CG_COMPILER_SUPER_DIR}/include
+       DOC "The directory where Cg/cg.h resides"
+       )
+@@ -98,6 +100,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"
+@@ -108,6 +112,8 @@
+       /usr/lib
+       /usr/local/lib64
+       /usr/local/lib
++      /opt/nvidia-cg-toolkit/lib64
++      /opt/nvidia-cg-toolkit/lib
+       ${CG_COMPILER_SUPER_DIR}/lib64
+       ${CG_COMPILER_SUPER_DIR}/lib
+       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
new file mode 100644
index 0000000..a478b7d
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
@@ -0,0 +1,79 @@
+adapted from debian patch need to be applied after paraview-3.14.1-removesqlite.patch
+
+--- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
++++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
+@@ -1,8 +1,8 @@
+-set(vtknetcdf_THIRD_PARTY 1)
+-set(vtknetcdf_LIBRARIES vtkNetCDF vtkNetCDF_cxx)
+-set(vtknetcdf_INCLUDE_DIRS
+-  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
+-  ${vtknetcdf_BINARY_DIR}/vtknetcdf
+-  )
++#set(vtknetcdf_THIRD_PARTY 1)
++set(vtknetcdf_LIBRARIES netcdf netcdf_c++)
++#set(vtknetcdf_INCLUDE_DIRS
++#  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
++#  ${vtknetcdf_BINARY_DIR}/vtknetcdf
++#  )
+ vtk_module_export_info()
+-add_subdirectory(vtknetcdf)
++#add_subdirectory(vtknetcdf)
+--- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
++++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
+@@ -16,6 +16,6 @@
+ #define __vtk_netcdf_h
+ 
+ /* Use the netcdf library configured for VTK.  */
+-#include <vtknetcdf/include/netcdf.h>
++#include <netcdf.h>
+ 
+ #endif
+--- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
++++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
+@@ -16,6 +16,6 @@
+ #define __vtk_netcdfcpp_h
+ 
+ /* Use the netcdf library configured for VTK.  */
+-#include <vtknetcdf/cxx/netcdfcpp.h>
++#include <netcdfcpp.h>
+ 
+ #endif
+--- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
++++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
+@@ -21,7 +21,7 @@
+   )
+ 
+ add_executable(ExoIICTests ${ExoIICTests})
+-target_link_libraries(ExoIICTests vtkCommon vtkexoIIc vtkNetCDF)
++target_link_libraries(ExoIICTests vtkCommon vtkexoIIc netcdf)
+ 
+ set(TestsToRun ${ExoIICTests})
+ remove(TestsToRun ExoIICTests.cxx)
+--- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
++++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
+@@ -241,7 +241,7 @@
+ 
+ 
+ VTK_ADD_LIBRARY(vtkexoIIc ${cbind_SRCS})
+-TARGET_LINK_LIBRARIES(vtkexoIIc vtkNetCDF)
++TARGET_LINK_LIBRARIES(vtkexoIIc netcdf)
+ 
+ IF(NOT VTK_INSTALL_NO_DEVELOPMENT)
+ #  INSTALL_FILES(${VTK_INSTALL_INCLUDE_DIR}/vtkexodus2 .h
+--- ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
++++ ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
+@@ -10,5 +10,5 @@
+ 
+ vtk_module_library(vtkIONetCDF ${Module_SRCS})
+ 
+-target_link_libraries(vtkIONetCDF vtkNetCDF_cxx)
++target_link_libraries(vtkIONetCDF netcdf netcdf_c++)
+ set_target_properties(vtkIONetCDF PROPERTIES LINK_INTERFACE_LIBRARIES "")
+--- ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
++++ ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
+@@ -8,4 +8,4 @@
+ 
+ vtk_module_library(vtkIOParallelNetCDF ${Module_SRCS})
+ 
+-target_link_libraries(vtkIOParallelNetCDF vtkNetCDF_cxx)
++target_link_libraries(vtkIOParallelNetCDF netcdf netcdf_c++)

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
new file mode 100644
index 0000000..65a5b20
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
@@ -0,0 +1,9 @@
+--- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
++++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
+@@ -28,5 +28,5 @@
+ // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
+ // the system
+-//#define GLX_GLXEXT_LEGACY
++#define GLX_GLXEXT_LEGACY
+ #include "GL/glx.h"
+ 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
new file mode 100644
index 0000000..b7d3e40
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
@@ -0,0 +1,22 @@
+--- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
++++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
+@@ -1185,7 +1185,7 @@
+     if (bitmap)
+       {
+       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
+-      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
++      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
+                                   metaData.descent);
+       }
+     ++heightString;
+@@ -1952,8 +1952,8 @@
+     if (bitmap)
+       {
+       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
+-      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
+-      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
++      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
++      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
+       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
+       }
+     else

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
new file mode 100644
index 0000000..20bed18
--- /dev/null
+++ b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
@@ -0,0 +1,302 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils multilib versionator python-single-r1 cmake-utils
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}-source"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	<dev-libs/protobuf-2.6
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	>=x11-libs/gl2ps-1.3.8
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt4
+			dev-qt/qtgui:4
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
+		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt4? (
+		dev-qt/designer:4
+		dev-qt/qtgui:4
+		dev-qt/qtopengl:4
+		dev-qt/qthelp:4[compat]
+		dev-qt/qtsql:4
+		dev-qt/qtwebkit:4
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	doc? ( app-doc/doxygen )"
+
+S=${WORKDIR}/${MY_P%-source}
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	# see patch headers for description
+	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
+		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
+		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
+		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
+		"${FILESDIR}"/${P}-glxext-legacy.patch \
+		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
+		"${FILESDIR}"/${P}-vtk-freetype.patch
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		Plugins/SciberQuestToolKit/CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
+		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
+		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	local mysql_lib mysql_includedir
+
+	if use mysql ; then
+		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
+			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
+			mysql_includedir="/usr/include/mysql"
+		else
+			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
+			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
+		fi
+	fi
+
+	# TODO: use system jsoncpp
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
+		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt4 Module_vtkRenderingQt)
+		$(cmake-utils_use qt4 Module_vtkViewsQt)
+		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt4 VTK_Group_Qt)
+		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use qt4 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+pkg_postinst() {
+	# with Qt4.5 there seem to be issues reading data files
+	# under certain locales. Setting LC_ALL=C should fix these.
+	elog ""
+	elog "If you experience data corruption during parsing of"
+	elog "data files with paraview please try setting your"
+	elog "locale to LC_ALL=C."
+	elog "If you plan to use paraview component from an existing shell"
+	elog "you should run env-update and . /etc/profile first"
+	elog ""
+	elog "paraview no longer exports bundled python modules in PYTHONPATH"
+	elog "globally due to clashes of bundled packages with system-wide"
+	elog "site-packages. If you want to use paraview's python modules"
+	elog "export"
+	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
+	elog "as needed."
+}

diff --git a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
new file mode 100644
index 0000000..7777925
--- /dev/null
+++ b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
@@ -0,0 +1,300 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils multilib versionator python-single-r1 cmake-utils
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}-source"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	<dev-libs/protobuf-2.6
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	>=x11-libs/gl2ps-1.3.8
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt4
+			dev-qt/qtgui:4
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
+		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt4? (
+		dev-qt/designer:4
+		dev-qt/qtgui:4
+		dev-qt/qtopengl:4
+		dev-qt/qthelp:4[compat]
+		dev-qt/qtsql:4
+		dev-qt/qtwebkit:4
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	# see patch headers for description
+	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
+		"${FILESDIR}"/${P}-removesqlite.patch \
+		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
+		"${FILESDIR}"/${P}-protobuf.patch \
+		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
+		"${FILESDIR}"/${P}-vtk-freetype.patch
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		Plugins/SciberQuestToolKit/CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
+		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
+		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	local mysql_lib mysql_includedir
+
+	if use mysql ; then
+		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
+			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
+			mysql_includedir="/usr/include/mysql"
+		else
+			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
+			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
+		fi
+	fi
+
+	# TODO: use system jsoncpp
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
+		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt4 Module_vtkRenderingQt)
+		$(cmake-utils_use qt4 Module_vtkViewsQt)
+		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt4 VTK_Group_Qt)
+		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use qt4 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+pkg_postinst() {
+	# with Qt4.5 there seem to be issues reading data files
+	# under certain locales. Setting LC_ALL=C should fix these.
+	elog ""
+	elog "If you experience data corruption during parsing of"
+	elog "data files with paraview please try setting your"
+	elog "locale to LC_ALL=C."
+	elog "If you plan to use paraview component from an existing shell"
+	elog "you should run env-update and . /etc/profile first"
+	elog ""
+	elog "paraview no longer exports bundled python modules in PYTHONPATH"
+	elog "globally due to clashes of bundled packages with system-wide"
+	elog "site-packages. If you want to use paraview's python modules"
+	elog "export"
+	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
+	elog "as needed."
+}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2015-09-21 21:36 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2015-09-21 21:36 UTC (permalink / raw
  To: gentoo-commits

commit:     3dcb8854a1862b2b215bad47782f184b8f3f6a39
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Mon Sep 21 21:35:02 2015 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Mon Sep 21 21:35:55 2015 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3dcb8854

sci-visualization/paraview: drop version 4.2.0-r1

Package-Manager: portage-2.2.20.1

 sci-visualization/paraview/Manifest                |   1 -
 .../paraview/files/paraview-4.0.1-vtknetcd.patch   |  79 ------
 .../paraview/paraview-4.2.0-r1.ebuild              | 300 ---------------------
 3 files changed, 380 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 4b660f9..f97d7ed 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,4 +1,3 @@
 DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
-DIST ParaView-v4.2.0-source.tar.gz 50285547 SHA256 ac26cc5fe5ce82d27531727a01242353d40984826eaa580edea0791887a07b6b SHA512 611f641ccaa62b285c595df0318da94a9e0e67a1c3040f60c33bdd32bf980db8371c84958c9d5f3191cfd5249969a60f51f8e5dfa9bd234c96ec51caecdb37c8 WHIRLPOOL 1c81a95e00f06b3c60e31c82aa6e87979c6d9b8000ca7298904d8c3f09df58153f6dde7b96df5f538a991f5764862d3059d1395db61f12464306d3c3fe919fe7
 DIST ParaView-v4.3.1-source.tar.gz 50842525 SHA256 d534c475fc052215ecadf4ad19d9c7996c634b5d965951292b966710509a2542 SHA512 73c17f7ba757647869b26992c0ac3a6b9298bce9d2b8c2fca28286064f2b83a29753028a29c6f478654fffc96c9d9f5dd638c64df2b05ded425da122109d31e3 WHIRLPOOL 3db1d02db95acf16f29c4784714985e4f6f7a32fbdf7fa58ad85ecfaf6ab60d7959ea3d5a3ab5d36739e56f1ee5b025d9b6275749966b576324629f14e96bde0
 DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
deleted file mode 100644
index a478b7d..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtknetcd.patch
+++ /dev/null
@@ -1,79 +0,0 @@
-adapted from debian patch need to be applied after paraview-3.14.1-removesqlite.patch
-
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/CMakeLists.txt
-@@ -1,8 +1,8 @@
--set(vtknetcdf_THIRD_PARTY 1)
--set(vtknetcdf_LIBRARIES vtkNetCDF vtkNetCDF_cxx)
--set(vtknetcdf_INCLUDE_DIRS
--  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
--  ${vtknetcdf_BINARY_DIR}/vtknetcdf
--  )
-+#set(vtknetcdf_THIRD_PARTY 1)
-+set(vtknetcdf_LIBRARIES netcdf netcdf_c++)
-+#set(vtknetcdf_INCLUDE_DIRS
-+#  ${vtknetcdf_SOURCE_DIR}/vtknetcdf/include
-+#  ${vtknetcdf_BINARY_DIR}/vtknetcdf
-+#  )
- vtk_module_export_info()
--add_subdirectory(vtknetcdf)
-+#add_subdirectory(vtknetcdf)
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdf.h
-@@ -16,6 +16,6 @@
- #define __vtk_netcdf_h
- 
- /* Use the netcdf library configured for VTK.  */
--#include <vtknetcdf/include/netcdf.h>
-+#include <netcdf.h>
- 
- #endif
---- ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
-+++ ParaView-3.98.0-src/VTK/ThirdParty/netcdf/vtk_netcdfcpp.h
-@@ -16,6 +16,6 @@
- #define __vtk_netcdfcpp_h
- 
- /* Use the netcdf library configured for VTK.  */
--#include <vtknetcdf/cxx/netcdfcpp.h>
-+#include <netcdfcpp.h>
- 
- #endif
---- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/test/CMakeLists.txt
-@@ -21,7 +21,7 @@
-   )
- 
- add_executable(ExoIICTests ${ExoIICTests})
--target_link_libraries(ExoIICTests vtkCommon vtkexoIIc vtkNetCDF)
-+target_link_libraries(ExoIICTests vtkCommon vtkexoIIc netcdf)
- 
- set(TestsToRun ${ExoIICTests})
- remove(TestsToRun ExoIICTests.cxx)
---- ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/ThirdParty/exodusII/vtkexodusII/CMakeLists.txt
-@@ -241,7 +241,7 @@
- 
- 
- VTK_ADD_LIBRARY(vtkexoIIc ${cbind_SRCS})
--TARGET_LINK_LIBRARIES(vtkexoIIc vtkNetCDF)
-+TARGET_LINK_LIBRARIES(vtkexoIIc netcdf)
- 
- IF(NOT VTK_INSTALL_NO_DEVELOPMENT)
- #  INSTALL_FILES(${VTK_INSTALL_INCLUDE_DIR}/vtkexodus2 .h
---- ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/IO/NetCDF/CMakeLists.txt
-@@ -10,5 +10,5 @@
- 
- vtk_module_library(vtkIONetCDF ${Module_SRCS})
- 
--target_link_libraries(vtkIONetCDF vtkNetCDF_cxx)
-+target_link_libraries(vtkIONetCDF netcdf netcdf_c++)
- set_target_properties(vtkIONetCDF PROPERTIES LINK_INTERFACE_LIBRARIES "")
---- ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
-+++ ParaView-3.98.0-src/VTK/IO/ParallelNetCDF/CMakeLists.txt
-@@ -8,4 +8,4 @@
- 
- vtk_module_library(vtkIOParallelNetCDF ${Module_SRCS})
- 
--target_link_libraries(vtkIOParallelNetCDF vtkNetCDF_cxx)
-+target_link_libraries(vtkIOParallelNetCDF netcdf netcdf_c++)

diff --git a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild b/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
deleted file mode 100644
index 7777925..0000000
--- a/sci-visualization/paraview/paraview-4.2.0-r1.ebuild
+++ /dev/null
@@ -1,300 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${P}-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${P}-protobuf.patch \
-		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2016-07-09 18:57 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2016-07-09 18:57 UTC (permalink / raw
  To: gentoo-commits

commit:     941b4a90ddb5b32021782dc2f4239abf2dd8da46
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sat Jul  9 17:17:35 2016 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sat Jul  9 18:57:33 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=941b4a90

sci-visualization/paraview: remove old versions

Package-Manager: portage-2.2.28

 sci-visualization/paraview/Manifest                |   2 -
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 ---
 .../files/paraview-4.0.1-removesqlite.patch        | 517 --------------------
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 --
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 -
 .../files/paraview-4.1.0-no-fatal-warnings.patch   |  19 -
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 -
 .../files/paraview-4.2.0-removesqlite.patch        | 541 ---------------------
 .../files/paraview-4.2.0-vtk-freetype.patch        |  22 -
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ------------
 sci-visualization/paraview/paraview-4.3.1.ebuild   | 288 -----------
 11 files changed, 1830 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index f97d7ed..3b515b6 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,3 +1 @@
-DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
-DIST ParaView-v4.3.1-source.tar.gz 50842525 SHA256 d534c475fc052215ecadf4ad19d9c7996c634b5d965951292b966710509a2542 SHA512 73c17f7ba757647869b26992c0ac3a6b9298bce9d2b8c2fca28286064f2b83a29753028a29c6f478654fffc96c9d9f5dd638c64df2b05ded425da122109d31e3 WHIRLPOOL 3db1d02db95acf16f29c4784714985e4f6f7a32fbdf7fa58ad85ecfaf6ab60d7959ea3d5a3ab5d36739e56f1ee5b025d9b6275749966b576324629f14e96bde0
 DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
deleted file mode 100644
index 6a09a1a..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
+++ /dev/null
@@ -1,72 +0,0 @@
-http://paraview.org/Bug/view.php?id=13656
-
-diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
---- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
-@@ -81,16 +81,24 @@
- #------------------------------------------------------------------------------
- # Generate the protbuf message file.
- #------------------------------------------------------------------------------
--get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	set (_PROTOC_COMPILER protoc)
-+	set (_PROTOC_DEPEND "")
-+else()
-+	set (_PROTOC_COMPILER protoc_compiler)
-+	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
-+endif()
-+
-+get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
- add_custom_command(
-     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
-            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
-     
--    COMMAND protoc_compiler
-+    COMMAND ${_PROTOC_COMPILER}
-            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
-            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
-            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
--    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
-+    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
-     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- )
- 
-@@ -109,5 +117,9 @@
- vtk_module_library(vtkPVServerImplementationCore
-   ${Module_SRCS})
- 
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
-+endif()
-+
- add_dependencies(vtkPVServerImplementationCore
-   protobuf_code_generation)
-diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
---- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
-@@ -34,7 +34,7 @@
- set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
- set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
- 
--vtk_module_third_party(protobuf
-+vtk_module_third_party(Protobuf
-   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
-   LIBRARIES protobuf
- )
-@@ -42,10 +42,12 @@
- # protobuf exports it's build-dir targets to a custom file
- # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
- # build-dir targets ourselves.
--vtk_target_export(protobuf)
--vtk_target_export(protobuf-lite)
--if (NOT CMAKE_CROSSCOMPILING)
--  vtk_compile_tools_target_export(protoc_compiler)
-+if (NOT VTK_USE_SYSTEM_PROTOBUF)
-+  vtk_target_export(protobuf)
-+  vtk_target_export(protobuf-lite)
-+  if (NOT CMAKE_CROSSCOMPILING)
-+    vtk_compile_tools_target_export(protoc_compiler)
-+  endif()
- endif()
- 
- # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
deleted file mode 100644
index be495b4..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
+++ /dev/null
@@ -1,517 +0,0 @@
-Description: Import patch from VTK to remove sqlite
-Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
-Last-Update: Mon Feb 11 14:58:03 UTC 2013
-
-remove the internal copy of sqlite (vtksqlite)
-http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
-
---- VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <vtksys/ios/fstream>
- #include <vtksys/ios/sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
---- VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <assert.h>
- 
-@@ -43,7 +43,7 @@
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -131,8 +131,8 @@
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -151,19 +151,19 @@
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -194,31 +194,31 @@
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -239,7 +239,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -259,7 +259,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -279,22 +279,22 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -315,7 +315,7 @@
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -326,12 +326,12 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -339,8 +339,8 @@
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -366,33 +366,33 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       vtksys_ios::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -423,11 +423,11 @@
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -451,7 +451,7 @@
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -463,11 +463,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -499,11 +499,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -647,11 +647,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -676,11 +676,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -705,12 +705,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -734,12 +734,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -763,17 +763,17 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -797,12 +797,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
---- VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
---- VTK/IO/SQL/vtkSQLiteQuery.h
-+++ VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
---- VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+set(vtksqlite_LIBRARIES sqlite3)
- vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
deleted file mode 100644
index 58ddde9..0000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
+++ /dev/null
@@ -1,36 +0,0 @@
---- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-+++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-@@ -82,6 +82,7 @@
-     FIND_PROGRAM( CG_COMPILER cgc
-       /usr/bin
-       /usr/local/bin
-+      /opt/nvidia-cg-toolkit/bin
-       DOC "The Cg Compiler"
-       )
-     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
-@@ -89,6 +90,7 @@
-     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
-       /usr/include
-       /usr/local/include
-+      /opt/nvidia-cg-toolkit/include
-       ${CG_COMPILER_SUPER_DIR}/include
-       DOC "The directory where Cg/cg.h resides"
-       )
-@@ -98,6 +100,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"
-@@ -108,6 +112,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
deleted file mode 100644
index 65a5b20..0000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
-+++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
-@@ -28,5 +28,5 @@
- // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
- // the system
--//#define GLX_GLXEXT_LEGACY
-+#define GLX_GLXEXT_LEGACY
- #include "GL/glx.h"
- 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch b/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
deleted file mode 100644
index 531be2f..0000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-diff --git a/VTK/CMake/vtkCompilerExtras.cmake b/VTK/CMake/vtkCompilerExtras.cmake
-index 05b2db9..48d9395 100644
---- a/VTK/CMake/vtkCompilerExtras.cmake
-+++ b/VTK/CMake/vtkCompilerExtras.cmake
-@@ -15,11 +15,11 @@ if(CMAKE_COMPILER_IS_GNUCXX)
-   # If we are compiling on Linux then set some extra linker flags too
-   if(CMAKE_SYSTEM_NAME MATCHES Linux)
-     set(CMAKE_SHARED_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set(CMAKE_MODULE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set (CMAKE_EXE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-   endif()
- 
-   # Now check if we can use visibility to selectively export symbols

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
deleted file mode 100644
index b7d3e40..0000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
-+++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
-@@ -1185,7 +1185,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1952,8 +1952,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
-+      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else

diff --git a/sci-visualization/paraview/files/paraview-4.2.0-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.2.0-removesqlite.patch
deleted file mode 100644
index 9861962..0000000
--- a/sci-visualization/paraview/files/paraview-4.2.0-removesqlite.patch
+++ /dev/null
@@ -1,541 +0,0 @@
-Description: Import patch from VTK to remove sqlite
-Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
-Last-Update: Mon Feb 11 14:58:03 UTC 2013
-
-remove the internal copy of sqlite (vtksqlite)
-http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
-
---- VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <vtksys/ios/fstream>
- #include <vtksys/ios/sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
---- VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <assert.h>
- 
-@@ -43,7 +43,7 @@
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -131,8 +131,8 @@
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -151,19 +151,19 @@
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -194,31 +194,31 @@
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -239,7 +239,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -259,7 +259,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -279,22 +279,22 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -315,7 +315,7 @@
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -326,12 +326,12 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -339,8 +339,8 @@
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -366,33 +366,33 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       vtksys_ios::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -423,11 +423,11 @@
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -451,7 +451,7 @@
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -463,11 +463,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -499,11 +499,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -647,11 +647,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -676,11 +676,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -705,12 +705,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -734,12 +734,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -763,17 +763,17 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -797,12 +797,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
---- VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
---- VTK/IO/SQL/vtkSQLiteQuery.h
-+++ VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
---- VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
--vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+#set(vtksqlite_LIBRARIES sqlite3)
-+#vtk_module_export_info()
-+#add_subdirectory(vtksqlite)
---- VTK/ThirdParty/sqlite/module.cmake
-+++ VTK/ThirdParty/sqlite/module.cmake
-@@ -1 +1 @@
--vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)
-+#vtk_module(vtksqlite EXCLUDE_FROM_WRAPPING)
---- VTK/IO/SQL/module.cmake
-+++ VTK/IO/SQL/module.cmake
-@@ -5,7 +5,7 @@
-     vtkIOCore
-   PRIVATE_DEPENDS
-     vtksys
--    vtksqlite # We should consider splitting this into a module.
-+#   vtksqlite # We should consider splitting this into a module.
-   TEST_DEPENDS
-     vtkIOLegacy
-     vtkTestingIOSQL
---- VTK/IO/SQL/CMakeLists.txt
-+++ VTK/IO/SQL/CMakeLists.txt
-@@ -28,3 +28,4 @@
-   )
- 
- vtk_module_library(vtkIOSQL ${Module_SRCS} ${SQLite_SRCS})
-+target_link_libraries(vtkIOSQL -lsqlite3)

diff --git a/sci-visualization/paraview/files/paraview-4.2.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.2.0-vtk-freetype.patch
deleted file mode 100644
index b7d3e40..0000000
--- a/sci-visualization/paraview/files/paraview-4.2.0-vtk-freetype.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
-+++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
-@@ -1185,7 +1185,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1952,8 +1952,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
-+      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
deleted file mode 100644
index 20bed18..0000000
--- a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
+++ /dev/null
@@ -1,302 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S=${WORKDIR}/${MY_P%-source}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
-		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
-		"${FILESDIR}"/${P}-glxext-legacy.patch \
-		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}

diff --git a/sci-visualization/paraview/paraview-4.3.1.ebuild b/sci-visualization/paraview/paraview-4.3.1.ebuild
deleted file mode 100644
index c9a1b26..0000000
--- a/sci-visualization/paraview/paraview-4.3.1.ebuild
+++ /dev/null
@@ -1,288 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	>=dev-libs/jsoncpp-0.10.1
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.1.0-no-fatal-warnings.patch \
-		"${FILESDIR}"/${PN}-4.2.0-protobuf.patch \
-		"${FILESDIR}"/${PN}-4.2.0-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.2.0-vtk-freetype.patch \
-		"${FILESDIR}"/${P}-protobuf-2.6.patch \
-		"${FILESDIR}"/${P}-fix-development-install.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2016-09-22 12:47 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2016-09-22 12:47 UTC (permalink / raw
  To: gentoo-commits

commit:     9bff88b6adfc72d4698ef6b00de09bfb86052f0a
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Thu Sep 22 12:45:13 2016 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Thu Sep 22 12:47:01 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9bff88b6

sci-visualization/paraview: remove old versions < 5.1.2

Package-Manager: portage-2.2.28

 sci-visualization/paraview/Manifest                |   3 -
 .../paraview/files/paraview-4.0.1-Protobuf.patch   |  72 ---
 .../paraview/files/paraview-4.0.1-gcc-4.7.patch    |  28 --
 .../files/paraview-4.0.1-removesqlite.patch        | 517 ---------------------
 .../files/paraview-4.0.1-vtk-cg-path.patch         |  36 --
 .../files/paraview-4.1.0-glxext-legacy.patch       |   9 -
 .../files/paraview-4.1.0-no-fatal-warnings.patch   |  19 -
 .../files/paraview-4.1.0-vtk-freetype.patch        |  22 -
 .../paraview/files/paraview-4.2.0-protobuf.patch   |  39 --
 .../files/paraview-4.3.1-protobuf-2.6.patch        | 177 -------
 .../paraview-5.1.0-only-require-cmake-3.3.patch    |  13 -
 .../paraview/paraview-4.1.0-r2.ebuild              | 302 ------------
 sci-visualization/paraview/paraview-4.4.0.ebuild   | 286 ------------
 .../paraview/paraview-5.1.0-r1.ebuild              | 274 -----------
 14 files changed, 1797 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 897fb95..7e51626 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,4 +1 @@
-DIST ParaView-v4.1.0-source.tar.gz 50460304 SHA256 80ef898c158d7fd9ceb0bcd83be1f679eef06ce4f20514a2435330cc97a3fdf3 SHA512 da91f7332a91746d60968a9d6cc1fe4878a3710f8e4a3d675dc65c337d6844f39df4c3e307d424ee0d2a832fd3c0f3d0c4da6a8b0a2aa6902920988fb53b9f7f WHIRLPOOL c3572d12f05b8443eb21a342c140d55e3c41e2af383aa850491aaeec412e62a45a4ee44e6d772dc9b6f141028911cb96b22a7818c6f15bc80bb8553d37008d96
-DIST ParaView-v4.4.0-source.tar.gz 58397252 SHA256 c2dc334a89df24ce5233b81b74740fc9f10bc181cd604109fd13f6ad2381fc73 SHA512 092dee4ca75b9f4e3b4a53c85ebc89f406a91f6dd9ac9a3deb65de776189c2582d15c2b1f8f0393ff4d7a438333f8801de22d2cf916b314d8b85d93cc5f4671e WHIRLPOOL 722be36c45563066a2e91e7ea3e382d6928056a38c01920089f6e16a721259e1e8f99b26c982f136f9cfac8f1cb1d9f54ee0267cea79360ace4c00e81a47e61b
-DIST ParaView-v5.1.0.tar.gz 51613148 SHA256 1ce345e9c5533c2854ad7e89cf4f90992bafee23707ae9f85d12b38405169f2a SHA512 c9af27d8be03783c7353735718a41ee03732db0f2e4f6e2db5e1e72d3df01801bb77294713c2b96eaf17e75d1fd6a30e340b3c33f496f7e705d07badfa196e69 WHIRLPOOL 08cd669f02fd54b7fc4054f23f04a3dc274e4ba8ebdf54fb14caaa95bc0c9fb2e2e5551a9e74d88062f2230eb511b7e18d6cb75bb43f4291e19dbaa2ed53cd1f
 DIST ParaView-v5.1.2.tar.gz 51635420 SHA256 ff02b7307a256b7c6e8ad900dee5796297494df7f9a0804fe801eb2f66e6a187 SHA512 9204732ecbe5048c96536a2d63f37ec51f331416bab11c982797d07cd0233e1424193d1c8cac6dfe7e91696997f8aaf92c3a32d7b05674c0b176d93444672e40 WHIRLPOOL 1bbb95672279317304dde1f3123a51f3ca787f0f0b1a28ce09e53f0fbfdf685da89efeb2b13c0409982cbc5566e3984542eeeb519aa757bdd849186135c57a64

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch b/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
deleted file mode 100644
index 6a09a1a..00000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-Protobuf.patch
+++ /dev/null
@@ -1,72 +0,0 @@
-http://paraview.org/Bug/view.php?id=13656
-
-diff -up ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
---- ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ParaViewCore/ServerImplementation/Core/CMakeLists.txt	2012-11-13 15:17:53.980027098 -0700
-@@ -81,16 +81,24 @@
- #------------------------------------------------------------------------------
- # Generate the protbuf message file.
- #------------------------------------------------------------------------------
--get_target_property(PROTOC_LOCATION protoc_compiler LOCATION)
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	set (_PROTOC_COMPILER protoc)
-+	set (_PROTOC_DEPEND "")
-+else()
-+	set (_PROTOC_COMPILER protoc_compiler)
-+	set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
-+endif()
-+
-+get_target_property(PROTOC_LOCATION ${_PROTOC_COMPILER} LOCATION)
- add_custom_command(
-     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
-            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
-     
--    COMMAND protoc_compiler
-+    COMMAND ${_PROTOC_COMPILER}
-            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
-            --proto_path "@CMAKE_CURRENT_SOURCE_DIR@"
-            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
--    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
-+    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
-     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- )
- 
-@@ -109,5 +117,9 @@
- vtk_module_library(vtkPVServerImplementationCore
-   ${Module_SRCS})
- 
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+	target_link_libraries(vtkPVServerImplementationCore ${CMAKE_THREAD_LIBS_INIT})
-+endif()
-+
- add_dependencies(vtkPVServerImplementationCore
-   protobuf_code_generation)
-diff -up ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf ParaView/ThirdParty/protobuf/CMakeLists.txt
---- ParaView/ThirdParty/protobuf/CMakeLists.txt.Protobuf	2012-11-08 07:51:51.000000000 -0700
-+++ ParaView/ThirdParty/protobuf/CMakeLists.txt	2012-11-13 15:09:31.526673020 -0700
-@@ -34,7 +34,7 @@
- set (PROTOBUF_INSTALL_LIB_DIR ${VTK_INSTALL_LIBRARY_DIR})
- set (PROTOBUF_INSTALL_EXPORT_NAME ${VTK_INSTALL_EXPORT_NAME})
- 
--vtk_module_third_party(protobuf
-+vtk_module_third_party(Protobuf
-   INCLUDE_DIRS ${CMAKE_CURRENT_SOURCE_DIR}/vtkprotobuf/src
-   LIBRARIES protobuf
- )
-@@ -42,10 +42,12 @@
- # protobuf exports it's build-dir targets to a custom file
- # (PROTOBUF_EXPORTS.cmake). We don't care much about that. We export
- # build-dir targets ourselves.
--vtk_target_export(protobuf)
--vtk_target_export(protobuf-lite)
--if (NOT CMAKE_CROSSCOMPILING)
--  vtk_compile_tools_target_export(protoc_compiler)
-+if (NOT VTK_USE_SYSTEM_PROTOBUF)
-+  vtk_target_export(protobuf)
-+  vtk_target_export(protobuf-lite)
-+  if (NOT CMAKE_CROSSCOMPILING)
-+    vtk_compile_tools_target_export(protoc_compiler)
-+  endif()
- endif()
- 
- # All these exports don't add any install rules. However we make protobuf itself

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch b/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch
deleted file mode 100644
index 1b941cf..00000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-gcc-4.7.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-Description: fix FTBFS with gcc-4.7
-Author: Mathieu Malaterre <malat@debian.org>
-Origin: http://anonscm.debian.org/gitweb/?p=collab-maint/vtk.git;a=commitdiff;h=428e763c995bb303805e07da70c1a34fc103d208
-Reviewed-by: Anton Gladky <gladky.anton@gmail.com>
-Last-Update: 2012-05-08
-
---- a/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx
-+++ b/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx
-@@ -35,6 +35,8 @@
- using namespace ftgl;
- #endif
- 
-+#include <stdint.h>
-+
- // Print debug info
- #define VTK_FTFC_DEBUG 0
- #define VTK_FTFC_DEBUG_CD 0
---- a/VTK/Rendering/FreeType/vtkFreeTypeUtilities.cxx
-+++ b/VTK/Rendering/FreeType/vtkFreeTypeUtilities.cxx
-@@ -36,6 +36,8 @@
- using namespace ftgl;
- #endif
- 
-+#include <stdint.h>
-+
- // Print debug info
- 
- #define VTK_FTFC_DEBUG 0

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch b/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
deleted file mode 100644
index be495b4..00000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-removesqlite.patch
+++ /dev/null
@@ -1,517 +0,0 @@
-Description: Import patch from VTK to remove sqlite
-Author: Mathieu Malaterre <mathieu.malaterre@gmail.com>
-Last-Update: Mon Feb 11 14:58:03 UTC 2013
-
-remove the internal copy of sqlite (vtksqlite)
-http://patch-tracker.debian.org/patch/series/view/paraview/3.14.1-7/removesqlite.patch
-
---- VTK/IO/SQL/vtkSQLiteDatabase.cxx
-+++ VTK/IO/SQL/vtkSQLiteDatabase.cxx
-@@ -29,7 +29,7 @@
- #include <vtksys/ios/fstream>
- #include <vtksys/ios/sstream>
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- vtkStandardNewMacro(vtkSQLiteDatabase);
- 
-@@ -307,15 +307,15 @@
-       }
-     }
- 
--  int result = vtk_sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
-+  int result = sqlite3_open(this->DatabaseFileName, & (this->SQLiteInstance));
- 
--  if (result != VTK_SQLITE_OK)
-+  if (result != SQLITE_OK)
-     {
-     vtkDebugMacro(<<"SQLite open() failed.  Error code is "
-                   << result << " and message is "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
- 
--    vtk_sqlite3_close(this->SQLiteInstance);
-+    sqlite3_close(this->SQLiteInstance);
-     return false;
-     }
-   else
-@@ -334,8 +334,8 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_close(this->SQLiteInstance);
--    if (result != VTK_SQLITE_OK)
-+    int result = sqlite3_close(this->SQLiteInstance);
-+    if (result != SQLITE_OK)
-       {
-       vtkWarningMacro(<< "Close(): SQLite returned result code " << result);
-       }
-@@ -374,7 +374,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetTables(): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return this->Tables;
-     }
-@@ -403,7 +403,7 @@
-   if (!status)
-     {
-     vtkErrorMacro(<< "GetRecord(" << table << "): Database returned error: "
--                  << vtk_sqlite3_errmsg(this->SQLiteInstance) );
-+                  << sqlite3_errmsg(this->SQLiteInstance) );
-     query->Delete();
-     return NULL;
-     }
-@@ -467,10 +467,10 @@
- // ----------------------------------------------------------------------
- bool vtkSQLiteDatabase::HasError()
- {
--  return (vtk_sqlite3_errcode(this->SQLiteInstance)!=VTK_SQLITE_OK);
-+  return (sqlite3_errcode(this->SQLiteInstance)!=SQLITE_OK);
- }
- 
- const char* vtkSQLiteDatabase::GetLastErrorText()
- {
--  return vtk_sqlite3_errmsg(this->SQLiteInstance);
-+  return sqlite3_errmsg(this->SQLiteInstance);
- }
---- VTK/IO/SQL/vtkSQLiteQuery.cxx
-+++ VTK/IO/SQL/vtkSQLiteQuery.cxx
-@@ -25,7 +25,7 @@
- #include "vtkVariant.h"
- #include "vtkVariantArray.h"
- 
--#include <vtksqlite/vtk_sqlite3.h>
-+#include <sqlite3.h>
- 
- #include <assert.h>
- 
-@@ -43,7 +43,7 @@
- {
-   this->Statement = NULL;
-   this->InitialFetch = true;
--  this->InitialFetchResult=VTK_SQLITE_DONE;
-+  this->InitialFetchResult=SQLITE_DONE;
-   this->LastErrorText = NULL;
-   this->TransactionInProgress = false;
- }
-@@ -61,7 +61,7 @@
-     {
-     if (this->Database != NULL)
-       {
--      vtk_sqlite3_finalize(this->Statement);
-+      sqlite3_finalize(this->Statement);
-       this->Statement = NULL;
-       }
-     }
-@@ -131,8 +131,8 @@
-   if (this->Statement)
-     {
-     vtkDebugMacro(<<"Finalizing old statement");
--    int finalizeStatus = vtk_sqlite3_finalize(this->Statement);
--    if (finalizeStatus != VTK_SQLITE_OK)
-+    int finalizeStatus = sqlite3_finalize(this->Statement);
-+    if (finalizeStatus != SQLITE_OK)
-       {
-       vtkWarningMacro(<<"SetQuery(): Finalize returned unexpected code "
-                       << finalizeStatus);
-@@ -151,19 +151,19 @@
-       return false;
-       }
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
-     const char *unused_statement;
- 
--    int prepareStatus = vtk_sqlite3_prepare_v2(db,
-+    int prepareStatus = sqlite3_prepare_v2(db,
-                                                this->Query,
-                                                static_cast<int>(strlen(this->Query)),
-                                                &this->Statement,
-                                                &unused_statement);
- 
--    if (prepareStatus != VTK_SQLITE_OK)
-+    if (prepareStatus != SQLITE_OK)
-       {
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--      vtkWarningMacro(<<"SetQuery(): vtk_sqlite3_prepare_v2() failed with error message "
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-+      vtkWarningMacro(<<"SetQuery(): sqlite3_prepare_v2() failed with error message "
-                     << this->GetLastErrorText()
-                     << " on statement: '"
-                     << this->Query << "'");
-@@ -194,31 +194,31 @@
-     }
-   else
-     {
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   vtkDebugMacro(<<"Execute(): Query ready to execute.");
- 
-   this->InitialFetch = true;
--  int result = vtk_sqlite3_step(this->Statement);
-+  int result = sqlite3_step(this->Statement);
-   this->InitialFetchResult = result;
- 
--  if (result == VTK_SQLITE_DONE)
-+  if (result == SQLITE_DONE)
-     {
-     this->SetLastErrorText(NULL);
-     this->Active = true;
-     return true;
-     }
--  else if (result != VTK_SQLITE_ROW)
-+  else if (result != SQLITE_ROW)
-     {
-     vtkSQLiteDatabase *dbContainer =
-       vtkSQLiteDatabase::SafeDownCast(this->Database);
-     assert(dbContainer != NULL);
- 
--    vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+    sqlite3 *db = dbContainer->SQLiteInstance;
- 
--    this->SetLastErrorText(vtk_sqlite3_errmsg(db));
--    vtkDebugMacro(<< "Execute(): vtk_sqlite3_step() returned error message "
-+    this->SetLastErrorText(sqlite3_errmsg(db));
-+    vtkDebugMacro(<< "Execute(): sqlite3_step() returned error message "
-                   << this->GetLastErrorText());
-     this->Active = false;
-     return false;
-@@ -239,7 +239,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_count(this->Statement);
-+    return sqlite3_column_count(this->Statement);
-     }
- }
- 
-@@ -259,7 +259,7 @@
-     }
-   else
-     {
--    return vtk_sqlite3_column_name(this->Statement, column);
-+    return sqlite3_column_name(this->Statement, column);
-     }
- }
- 
-@@ -279,22 +279,22 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
-+      case SQLITE_INTEGER:
-         return VTK_INT;
--      case VTK_SQLITE_FLOAT:
-+      case SQLITE_FLOAT:
-         return VTK_FLOAT;
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-         return VTK_STRING;
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-         return VTK_STRING; // until we have a BLOB type of our own
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-         return VTK_VOID; // ??? what makes sense here?
-       default:
-       {
-       vtkErrorMacro(<<"GetFieldType(): Unknown data type "
--                    << vtk_sqlite3_column_type(this->Statement, column)
-+                    << sqlite3_column_type(this->Statement, column)
-                     <<" from SQLite.");
-       return VTK_VOID;
-       }
-@@ -315,7 +315,7 @@
-     {
-     vtkDebugMacro(<<"NextRow(): Initial fetch being handled.");
-     this->InitialFetch = false;
--    if (this->InitialFetchResult == VTK_SQLITE_DONE)
-+    if (this->InitialFetchResult == SQLITE_DONE)
-       {
-       return false;
-       }
-@@ -326,12 +326,12 @@
-     }
-   else
-     {
--    int result = vtk_sqlite3_step(this->Statement);
--    if (result == VTK_SQLITE_DONE)
-+    int result = sqlite3_step(this->Statement);
-+    if (result == SQLITE_DONE)
-       {
-       return false;
-       }
--    else if (result == VTK_SQLITE_ROW)
-+    else if (result == SQLITE_ROW)
-       {
-       return true;
-       }
-@@ -339,8 +339,8 @@
-       {
-       vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-       assert(dbContainer != NULL);
--      vtk_sqlite3 *db = dbContainer->SQLiteInstance;
--      this->SetLastErrorText(vtk_sqlite3_errmsg(db));
-+      sqlite3 *db = dbContainer->SQLiteInstance;
-+      this->SetLastErrorText(sqlite3_errmsg(db));
-       vtkErrorMacro(<<"NextRow(): Database returned error code "
-                     << result << " with the following message: "
-                     << this->GetLastErrorText());
-@@ -366,33 +366,33 @@
-     }
-   else
-     {
--    switch (vtk_sqlite3_column_type(this->Statement, column))
-+    switch (sqlite3_column_type(this->Statement, column))
-       {
--      case VTK_SQLITE_INTEGER:
--        return vtkVariant(vtk_sqlite3_column_int(this->Statement, column));
-+      case SQLITE_INTEGER:
-+        return vtkVariant(sqlite3_column_int(this->Statement, column));
- 
--      case VTK_SQLITE_FLOAT:
--        return vtkVariant(vtk_sqlite3_column_double(this->Statement, column));
-+      case SQLITE_FLOAT:
-+        return vtkVariant(sqlite3_column_double(this->Statement, column));
- 
--      case VTK_SQLITE_TEXT:
-+      case SQLITE_TEXT:
-       {
-       vtksys_ios::ostringstream str;
--      str << vtk_sqlite3_column_text(this->Statement, column);
-+      str << sqlite3_column_text(this->Statement, column);
-       return vtkVariant(vtkStdString(str.str()));
-       }
- 
--      case VTK_SQLITE_BLOB:
-+      case SQLITE_BLOB:
-       {
-       // This is a hack ... by passing the BLOB to vtkStdString with an explicit
-       // byte count, we ensure that the string will store all of the BLOB's bytes,
-       // even if there are NULL values.
- 
-       return vtkVariant(vtkStdString(
--        static_cast<const char*>(vtk_sqlite3_column_blob(this->Statement, column)),
--        vtk_sqlite3_column_bytes(this->Statement, column)));
-+        static_cast<const char*>(sqlite3_column_blob(this->Statement, column)),
-+        sqlite3_column_bytes(this->Statement, column)));
-       }
- 
--      case VTK_SQLITE_NULL:
-+      case SQLITE_NULL:
-       default:
-         return vtkVariant();
-       }
-@@ -423,11 +423,11 @@
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
- 
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, BEGIN_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = true;
-     this->SetLastErrorText(NULL);
-@@ -451,7 +451,7 @@
- {
-   if (this->Statement)
-     {
--    vtk_sqlite3_finalize(this->Statement);
-+    sqlite3_finalize(this->Statement);
-     this->Statement = NULL;
-     }
- 
-@@ -463,11 +463,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, COMMIT_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -499,11 +499,11 @@
- 
-   vtkSQLiteDatabase *dbContainer = vtkSQLiteDatabase::SafeDownCast( this->Database );
-   assert(dbContainer != NULL);
--  vtk_sqlite3 *db = dbContainer->SQLiteInstance;
-+  sqlite3 *db = dbContainer->SQLiteInstance;
-   char *errorMessage = NULL;
--  int result = vtk_sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
-+  int result = sqlite3_exec(db, ROLLBACK_TRANSACTION, NULL, NULL, &errorMessage);
- 
--  if (result == VTK_SQLITE_OK)
-+  if (result == SQLITE_OK)
-     {
-     this->TransactionInProgress = false;
-     this->SetLastErrorText(NULL);
-@@ -647,11 +647,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, value);
-+  int status = sqlite3_bind_int(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int returned error: " << status;
-@@ -676,11 +676,11 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
--  int status = vtk_sqlite3_bind_int(this->Statement, index+1, static_cast<vtk_sqlite_int64>(value));
-+  int status = sqlite3_bind_int(this->Statement, index+1, static_cast<sqlite_int64>(value));
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_int64 returned error: " << status;
-@@ -705,12 +705,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_double(this->Statement, index+1, value);
-+  int status = sqlite3_bind_double(this->Statement, index+1, value);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_double returned error: " << status;
-@@ -734,12 +734,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_bind_text(this->Statement, index+1, value, length, VTK_SQLITE_TRANSIENT);
-+  int status = sqlite3_bind_text(this->Statement, index+1, value, length, SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_text returned error: " << status;
-@@ -763,17 +763,17 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
-   int status =
--    vtk_sqlite3_bind_blob(this->Statement,
-+    sqlite3_bind_blob(this->Statement,
-                           index+1,
-                           data,
-                           length,
--                          VTK_SQLITE_TRANSIENT);
-+                          SQLITE_TRANSIENT);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_bind_blob returned error: " << status;
-@@ -797,12 +797,12 @@
-   if (this->Active)
-     {
-     this->Active = false;
--    vtk_sqlite3_reset(this->Statement);
-+    sqlite3_reset(this->Statement);
-     }
- 
--  int status = vtk_sqlite3_clear_bindings(this->Statement);
-+  int status = sqlite3_clear_bindings(this->Statement);
- 
--  if (status != VTK_SQLITE_OK)
-+  if (status != SQLITE_OK)
-     {
-     vtksys_ios::ostringstream errormessage;
-     errormessage << "sqlite_clear_bindings returned error: " << status;
---- VTK/IO/SQL/vtkSQLiteDatabase.h
-+++ VTK/IO/SQL/vtkSQLiteDatabase.h
-@@ -49,7 +49,7 @@
- class vtkSQLQuery;
- class vtkSQLiteQuery;
- class vtkStringArray;
--struct vtk_sqlite3;
-+struct sqlite3;
- 
- class VTKIOSQL_EXPORT vtkSQLiteDatabase : public vtkSQLDatabase
- {
-@@ -147,7 +147,7 @@
-   virtual bool ParseURL(const char* url);
- 
- private:
--  vtk_sqlite3 *SQLiteInstance;
-+  sqlite3 *SQLiteInstance;
- 
-   // We want this to be private, a user of this class
-   // should not be setting this for any reason
---- VTK/IO/SQL/vtkSQLiteQuery.h
-+++ VTK/IO/SQL/vtkSQLiteQuery.h
-@@ -47,7 +47,7 @@
- class vtkSQLiteDatabase;
- class vtkVariant;
- class vtkVariantArray;
--struct vtk_sqlite3_stmt;
-+struct sqlite3_stmt;
- 
- class VTKIOSQL_EXPORT vtkSQLiteQuery : public vtkSQLQuery
- {
-@@ -155,7 +155,7 @@
-   vtkSQLiteQuery(const vtkSQLiteQuery &); // Not implemented.
-   void operator=(const vtkSQLiteQuery &); // Not implemented.
- 
--  vtk_sqlite3_stmt *Statement;
-+  sqlite3_stmt *Statement;
-   bool InitialFetch;
-   int InitialFetchResult;
-   char *LastErrorText;
---- VTK/ThirdParty/sqlite/CMakeLists.txt
-+++ VTK/ThirdParty/sqlite/CMakeLists.txt
-@@ -1,4 +1,4 @@
--set(vtksqlite_THIRD_PARTY 1)
--set(vtksqlite_LIBRARIES vtksqlite)
-+#set(vtksqlite_THIRD_PARTY 1)
-+set(vtksqlite_LIBRARIES sqlite3)
- vtk_module_export_info()
--add_subdirectory(vtksqlite)
-+#add_subdirectory(vtksqlite)

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch b/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
deleted file mode 100644
index 58ddde9..00000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-vtk-cg-path.patch
+++ /dev/null
@@ -1,36 +0,0 @@
---- ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-+++ ParaView-3.98.0-src/VTK/CMake/FindCg.cmake
-@@ -82,6 +82,7 @@
-     FIND_PROGRAM( CG_COMPILER cgc
-       /usr/bin
-       /usr/local/bin
-+      /opt/nvidia-cg-toolkit/bin
-       DOC "The Cg Compiler"
-       )
-     GET_FILENAME_COMPONENT(CG_COMPILER_DIR "${CG_COMPILER}" PATH)
-@@ -89,6 +90,7 @@
-     FIND_PATH( CG_INCLUDE_PATH Cg/cg.h
-       /usr/include
-       /usr/local/include
-+      /opt/nvidia-cg-toolkit/include
-       ${CG_COMPILER_SUPER_DIR}/include
-       DOC "The directory where Cg/cg.h resides"
-       )
-@@ -98,6 +100,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"
-@@ -108,6 +112,8 @@
-       /usr/lib
-       /usr/local/lib64
-       /usr/local/lib
-+      /opt/nvidia-cg-toolkit/lib64
-+      /opt/nvidia-cg-toolkit/lib
-       ${CG_COMPILER_SUPER_DIR}/lib64
-       ${CG_COMPILER_SUPER_DIR}/lib
-       DOC "The Cg runtime library"

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch b/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
deleted file mode 100644
index 65a5b20..00000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-glxext-legacy.patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- a/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx_orig	2014-01-11 15:02:10.000000000 +0100
-+++ b/ParaView-v4.1.0/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx	2014-11-11 13:12:25.000000000 +0100
-@@ -28,5 +28,5 @@
- // define GLX_GLXEXT_LEGACY to prevent glx.h to include glxext.h provided by
- // the system
--//#define GLX_GLXEXT_LEGACY
-+#define GLX_GLXEXT_LEGACY
- #include "GL/glx.h"
- 

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch b/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
deleted file mode 100644
index 531be2f..00000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-no-fatal-warnings.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-diff --git a/VTK/CMake/vtkCompilerExtras.cmake b/VTK/CMake/vtkCompilerExtras.cmake
-index 05b2db9..48d9395 100644
---- a/VTK/CMake/vtkCompilerExtras.cmake
-+++ b/VTK/CMake/vtkCompilerExtras.cmake
-@@ -15,11 +15,11 @@ if(CMAKE_COMPILER_IS_GNUCXX)
-   # If we are compiling on Linux then set some extra linker flags too
-   if(CMAKE_SYSTEM_NAME MATCHES Linux)
-     set(CMAKE_SHARED_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set(CMAKE_MODULE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-     set (CMAKE_EXE_LINKER_FLAGS
--      "-Wl,--fatal-warnings -Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-+      "-Wl,--no-undefined -lc ${CMAKE_SHARED_LINKER_FLAGS}")
-   endif()
- 
-   # Now check if we can use visibility to selectively export symbols

diff --git a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch b/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
deleted file mode 100644
index b7d3e40..00000000
--- a/sci-visualization/paraview/files/paraview-4.1.0-vtk-freetype.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx_orig	2014-12-23 09:25:35.000000000 +0100
-+++ b/ParaView-v4.2.0-source/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx	2014-12-24 09:40:31.886953389 +0100
-@@ -1185,7 +1185,7 @@
-     if (bitmap)
-       {
-       metaData.ascent = std::max(bitmapGlyph->top - 1, metaData.ascent);
--      metaData.descent = std::min(-(bitmap->rows - (bitmapGlyph->top - 1)),
-+      metaData.descent = std::min(-(static_cast<int>(bitmap->rows) - (bitmapGlyph->top - 1)),
-                                   metaData.descent);
-       }
-     ++heightString;
-@@ -1952,8 +1952,8 @@
-     if (bitmap)
-       {
-       bbox[0] = std::min(bbox[0], pen[0] + bitmapGlyph->left);
--      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + bitmap->width);
--      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - bitmap->rows);
-+      bbox[1] = std::max(bbox[1], pen[0] + bitmapGlyph->left + static_cast<int>(bitmap->width));
-+      bbox[2] = std::min(bbox[2], pen[1] + bitmapGlyph->top - 1 - static_cast<int>(bitmap->rows));
-       bbox[3] = std::max(bbox[3], pen[1] + bitmapGlyph->top - 1);
-       }
-     else

diff --git a/sci-visualization/paraview/files/paraview-4.2.0-protobuf.patch b/sci-visualization/paraview/files/paraview-4.2.0-protobuf.patch
deleted file mode 100644
index 498ad9b..00000000
--- a/sci-visualization/paraview/files/paraview-4.2.0-protobuf.patch
+++ /dev/null
@@ -1,39 +0,0 @@
-http://paraview.org/Bug/view.php?id=13656
-
----
- ParaViewCore/ServerImplementation/Core/CMakeLists.txt | 12 ++++++++++--
- 1 file changed, 10 insertions(+), 2 deletions(-)
-
-diff --git a/ParaViewCore/ServerImplementation/Core/CMakeLists.txt b/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
-index 5ca5168..2a7ff4b 100644
---- a/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
-+++ b/ParaViewCore/ServerImplementation/Core/CMakeLists.txt
-@@ -82,15 +82,23 @@ set (${vtk-module}_HDRS
- #------------------------------------------------------------------------------
- # Generate the protbuf message file.
- #------------------------------------------------------------------------------
-+if (VTK_USE_SYSTEM_PROTOBUF)
-+    set (_PROTOC_COMPILER protoc)
-+    set (_PROTOC_DEPEND "")
-+else()
-+    set (_PROTOC_COMPILER protoc_compiler)
-+    set (_PROTOC_DEPEND ${_PROTOC_COMPILER})
-+endif()
-+
- add_custom_command(
-     OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.h
-            ${CMAKE_CURRENT_BINARY_DIR}/vtkPVMessage.pb.cc
-     
--    COMMAND protoc_compiler
-+    COMMAND ${_PROTOC_COMPILER}
-            "--cpp_out=dllexport_decl=VTKPVSERVERIMPLEMENTATIONCORE_EXPORT:${CMAKE_CURRENT_BINARY_DIR}"
-            --proto_path "${CMAKE_CURRENT_SOURCE_DIR}"
-            "${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto"
--    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto protoc_compiler
-+    DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/vtkPVMessage.proto ${_PROTOC_DEPEND}
-     WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- )
- 
--- 
-2.0.5
-

diff --git a/sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch b/sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch
deleted file mode 100644
index 5a7871f..00000000
--- a/sci-visualization/paraview/files/paraview-4.3.1-protobuf-2.6.patch
+++ /dev/null
@@ -1,177 +0,0 @@
-https://gitlab.kitware.com/ben.boeckel/paraview/commit/40a62e0bd20ceb73d7a545dab73e975fa07cddbb
-http://www.vtk.org/Bug/view.php?id=15442#c34997
-
-https://bugs.gentoo.org/show_bug.cgi?id=537988
-
-This updates the *.proto files to be compatible with version 2.6 and fixes
-a bug that prevented successful compilation with protobuf 2.6.
-
---- a/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto
-+++ b/ParaViewCore/ServerImplementation/Core/vtkPVMessage.proto
-@@ -21,7 +21,7 @@ message Variant {
-     MAP     = 7;
-     }
- 
--  required Type    type            = 1;
-+  optional Type    type            = 1;
-   repeated sint64  idtype          = 3;
-   repeated sint32  integer         = 4;
-   repeated double  float64         = 5;
-@@ -47,8 +47,8 @@ message MessageCollection
- 
- message Message
- {
--  required uint64 global_id  = 1;
--  required uint32 location   = 2;
-+  optional uint64 global_id  = 1;
-+  optional uint32 location   = 2;
-   optional bool   share_only = 3 [default = false];
-   optional bool   req_def    = 4 [default = false];
-   optional uint32 client_id  = 5 [default = 0];
-@@ -62,10 +62,10 @@ message DefinitionHeader
- {
-   extend Message {
-     // The classname for the driver process i.e. the client, typically
--    required string client_class = 10;
-+    optional string client_class = 10;
- 
-     // The classname for the process where the processing occurs
--    required string server_class = 11;
-+    optional string server_class = 11;
-   }
- }
- 
-@@ -76,32 +76,32 @@ message ProxyState
- 
-   message SubProxy
-     {
--    required string name      = 1;
--    required uint32 global_id = 2;
-+    optional string name      = 1;
-+    optional uint32 global_id = 2;
-     }
- 
-   message Annotation
-     {
--    required string key   = 1;
--    required string value = 2;
-+    optional string key   = 1;
-+    optional string value = 2;
-     }
- 
-   message UserData
-     {
--    required string key   = 1;
-+    optional string key   = 1;
-     repeated Variant variant = 2;
-     }
- 
-   message Property
-     {
--    required string  name  = 1;
-+    optional string  name  = 1;
-     optional Variant value = 2;
-     repeated UserData user_data = 3;
-     }
- 
-   extend Message {
--    required string     xml_group           = 20;
--    required string     xml_name            = 21;
-+    optional string     xml_group           = 20;
-+    optional string     xml_name            = 21;
-     optional string     xml_sub_proxy_name  = 22;
-     repeated Property   property            = 23;
-     repeated SubProxy   subproxy            = 24;
-@@ -118,8 +118,8 @@ message PXMRegistrationState
-   message Entry
-     {
-     optional string group     = 1;
--    required string name      = 2;
--    required uint64 global_id = 3;
-+    optional string name      = 2;
-+    optional uint64 global_id = 3;
-     }
- 
-   extend Message {
-@@ -135,9 +135,9 @@ message ProxyDefinitionState
- {
-   message ProxyXMLDefinition
-     {
--    required string group = 1;
--    required string name  = 2;
--    required string xml   = 3;
-+    optional string group = 1;
-+    optional string name  = 2;
-+    optional string xml   = 3;
-     }
- 
-   extend Message {
-@@ -181,9 +181,9 @@ message LinkState {
-       OUTPUT = 2;
-       }
- 
--    required uint32 proxy         = 1;
-+    optional uint32 proxy         = 1;
-     optional string property_name = 2;
--    required Direction direction  = 3;
-+    optional Direction direction  = 3;
-     }
- 
-   extend Message {
-@@ -206,7 +206,7 @@ message MousePointer {
-   }
- 
-   extend Message {
--    required uint32 view      = 70;
-+    optional uint32 view      = 70;
-     optional double x         = 71 [default = 0];
-     optional double y         = 72 [default = 0];
-     optional bool   forceShow = 73 [default = false];
-@@ -219,7 +219,7 @@ message MousePointer {
- message ChartViewBounds {
- 
-   extend Message {
--    required uint32 view  = 75;
-+    optional uint32 view  = 75;
-     repeated double range = 76;
-   }
- }
-@@ -229,7 +229,7 @@ message ChartViewBounds {
- message ClientsInformation {
- 
-   message ClientInfo {
--    required uint32 user       = 1;
-+    optional uint32 user       = 1;
-     optional string name       = 2;
-     optional bool   is_master  = 3 [default = false];
-     optional bool   follow_cam = 4 [default = false];
-@@ -242,8 +242,8 @@ message ClientsInformation {
- 
- message ChatMessage {
-   extend Message {
--    required uint32 author = 84;
--    required string txt    = 85;
-+    optional uint32 author = 84;
-+    optional string txt    = 85;
-   }
- }
- 
-@@ -256,7 +256,7 @@ message QtEvent {
-   }
- 
-   extend Message {
--    required QtEventType type  = 98;
-+    optional QtEventType type  = 98;
-   }
- }
- 
---- a/ParaViewCore/ServerManager/Rendering/vtkSMCameraLink.cxx
-+++ b/ParaViewCore/ServerManager/Rendering/vtkSMCameraLink.cxx
-@@ -363,6 +363,6 @@ void vtkSMCameraLink::LoadState(const vtkSMMessage *msg, vtkSMProxyLocator *loca
- void vtkSMCameraLink::UpdateState()
- {
-   this->Superclass::UpdateState();
--  this->State->GetExtension(LinkState::sync_interactive_renders,
-+  this->State->SetExtension(LinkState::sync_interactive_renders,
-     this->GetSynchronizeInteractiveRenders());
- }

diff --git a/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch b/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch
deleted file mode 100644
index 103c28a..00000000
--- a/sci-visualization/paraview/files/paraview-5.1.0-only-require-cmake-3.3.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index d476bb2..bc814f9 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -28,7 +28,7 @@
- #  SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #
- #==========================================================================
--cmake_minimum_required(VERSION 3.5)
-+cmake_minimum_required(VERSION 3.3)
- 
- project(ParaView)
- 

diff --git a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild b/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
deleted file mode 100644
index 5745716..00000000
--- a/sci-visualization/paraview/paraview-4.1.0-r2.ebuild
+++ /dev/null
@@ -1,302 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	<dev-libs/protobuf-2.6
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S=${WORKDIR}/${MY_P%-source}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-removesqlite.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.0.1-vtk-cg-path.patch \
-		"${FILESDIR}"/${PN}-4.0.1-Protobuf.patch \
-		"${FILESDIR}"/${P}-glxext-legacy.patch \
-		"${FILESDIR}"/${P}-no-fatal-warnings.patch \
-		"${FILESDIR}"/${P}-vtk-freetype.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	local mysql_lib mysql_includedir
-
-	if use mysql ; then
-		if [[ $(mysql_config --version | sed 's/\.//g') -lt 5529 ]] ; then
-			mysql_lib="/usr/$(get_libdir)/mysql/libmysqlclient.so"
-			mysql_includedir="/usr/include/mysql"
-		else
-			mysql_lib="$(mysql_config --variable=pkglibdir)/libmysqlclient.so"
-			mysql_includedir="$(mysql_config --variable=pkgincludedir)"
-		fi
-	fi
-
-	# TODO: use system jsoncpp
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		-DMYSQL_INCLUDE_DIRECTORIES="$(usex mysql "${mysql_includedir}" "")"
-		-DMYSQL_LIBRARY="$(usex mysql "${mysql_lib}" "")"
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}

diff --git a/sci-visualization/paraview/paraview-4.4.0.ebuild b/sci-visualization/paraview/paraview-4.4.0.ebuild
deleted file mode 100644
index e583325..00000000
--- a/sci-visualization/paraview/paraview-4.4.0.ebuild
+++ /dev/null
@@ -1,286 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}-source"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python qt4 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	>=dev-libs/jsoncpp-0.10.1
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt4
-			dev-qt/qtgui:4
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt4? ( dev-python/PyQt4[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt4? (
-		dev-qt/designer:4
-		dev-qt/qtgui:4
-		dev-qt/qtopengl:4
-		dev-qt/qthelp:4[compat]
-		dev-qt/qtsql:4
-		dev-qt/qtwebkit:4
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.0.1-gcc-4.7.patch \
-		"${FILESDIR}"/${PN}-4.2.0-protobuf.patch \
-		"${FILESDIR}"/${PN}-4.3.1-fix-development-install.patch \
-		"${FILESDIR}"/${PN}-4.3.1-protobuf-2.6.patch \
-		"${FILESDIR}"/${P}-removesqlite.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt4 PARAVIEW_BUILD_QT_GUI)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt4 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt4 Module_vtkRenderingQt)
-		$(cmake-utils_use qt4 Module_vtkViewsQt)
-		$(cmake-utils_use qt4 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt4 VTK_Group_Qt)
-		$(cmake-utils_use !qt4 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt4 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt4 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	# with Qt4.5 there seem to be issues reading data files
-	# under certain locales. Setting LC_ALL=C should fix these.
-	elog ""
-	elog "If you experience data corruption during parsing of"
-	elog "data files with paraview please try setting your"
-	elog "locale to LC_ALL=C."
-	elog "If you plan to use paraview component from an existing shell"
-	elog "you should run env-update and . /etc/profile first"
-	elog ""
-	elog "paraview no longer exports bundled python modules in PYTHONPATH"
-	elog "globally due to clashes of bundled packages with system-wide"
-	elog "site-packages. If you want to use paraview's python modules"
-	elog "export"
-	elog "  PYTHONPATH=${EPREFIX}/usr/${PVLIBDIR}:${EPREFIX}/usr/${PVLIBDIR}/site-packages"
-	elog "as needed."
-}

diff --git a/sci-visualization/paraview/paraview-5.1.0-r1.ebuild b/sci-visualization/paraview/paraview-5.1.0-r1.ebuild
deleted file mode 100644
index 23fa295..00000000
--- a/sci-visualization/paraview/paraview-5.1.0-r1.ebuild
+++ /dev/null
@@ -1,274 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils multilib versionator python-single-r1 cmake-utils
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol plugins python +qt5 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	dev-libs/expat
-	>=dev-libs/jsoncpp-0.10.1
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	media-libs/freetype
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/jpeg:0
-	virtual/opengl
-	>=x11-libs/gl2ps-1.3.8
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/twisted-core
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebkit:5
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	>=dev-util/cmake-3.3.1
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# see patch headers for description
-	epatch "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch \
-		"${FILESDIR}"/${PN}-4.3.1-fix-development-install.patch \
-		"${FILESDIR}"/${PN}-4.4.0-removesqlite.patch \
-		"${FILESDIR}"/${P}-only-require-cmake-3.3.patch
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		Plugins/SciberQuestToolKit/CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx \
-		Plugins/SciberQuestToolKit/ParaViewPlugin/CMakeLists.txt \
-		Plugins/SciberQuestToolKit/SciberQuest/CMakeLists.txt || die
-
-	# no proper switch
-	use nvcontrol || {
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	}
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	# VTK_USE_SYSTEM_QTTESTING
-	# PARAVIEW_USE_SYSTEM_AUTOBAHN
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
-		-DVTK_USE_SYSTEM_ZOPE=ON
-		-DVTK_USE_SYSTEM_TWISTED=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DVTK_USE_OFFSCREEN=TRUE
-		-DCMAKE_USE_PTHREADS=ON
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DPROTOC_LOCATION=$(type -P protoc)
-		-DVTK_Group_StandAlone=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	# TODO: XDMF_USE_MYSQL?
-	# VTK_WRAP_JAVA
-	mycmakeargs+=(
-		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
-		$(cmake-utils_use qt5 PARAVIEW_BUILD_QT_GUI)
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtOpenGL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtSQL)
-		$(cmake-utils_use qt5 Module_vtkGUISupportQtWebkit)
-		$(cmake-utils_use qt5 Module_vtkRenderingQt)
-		$(cmake-utils_use qt5 Module_vtkViewsQt)
-		$(cmake-utils_use qt5 VTK_Group_ParaViewQt)
-		$(cmake-utils_use qt5 VTK_Group_Qt)
-		$(cmake-utils_use !qt5 PQWIDGETS_DISABLE_QTWEBKIT)
-		$(cmake-utils_use boost Module_vtkInfovisBoost)
-		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
-		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
-		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
-		$(cmake-utils_use mpi VTK_Group_MPI)
-		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
-		$(cmake-utils_use mpi XDMF_BUILD_MPI)
-		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
-		$(cmake-utils_use python VTK_Group_ParaViewPython)
-		$(cmake-utils_use python XDMF_WRAP_PYTHON)
-		$(cmake-utils_use python Module_vtkPython)
-		$(cmake-utils_use python Module_pqPython)
-		$(cmake-utils_use python Module_vtkWrappingPythonCore)
-		$(cmake-utils_use python Module_vtkPVPythonSupport)
-		$(cmake-utils_use python Module_AutobahnPython)
-		$(cmake-utils_use python Module_Twisted)
-		$(cmake-utils_use python Module_ZopeInterface)
-		$(cmake-utils_use python Module_vtkmpi4py)
-		$(usex qt5 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
-		$(cmake-utils_use doc BUILD_DOCUMENTATION)
-		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
-		$(cmake-utils_use examples BUILD_EXAMPLES)
-		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
-		$(cmake-utils_use mysql Module_vtkIOMySQL)
-		$(cmake-utils_use sqlite Module_vtksqlite)
-		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
-		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
-		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
-		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
-		$(cmake-utils_use tk VTK_Group_Tk)
-		$(cmake-utils_use tk VTK_USE_TK)
-		$(cmake-utils_use tk Module_vtkRenderingTk)
-		$(cmake-utils_use tcl Module_vtkTclTk)
-		$(cmake-utils_use tcl Module_vtkWrappingTcl)
-		$(cmake-utils_use test BUILD_TESTING)
-		)
-
-	if use qt5 ; then
-		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
-		if use python ; then
-			# paraview cannot guess sip directory properly
-			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
-		fi
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
-		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
-		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
-		# these are always needed for plugins
-		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
-		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2017-06-01  7:36 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2017-06-01  7:36 UTC (permalink / raw
  To: gentoo-commits

commit:     566c3fcb2b7bc5da3dc457edc9c6153be48d6f4b
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Wed May 31 21:28:17 2017 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Thu Jun  1 07:36:35 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=566c3fcb

sci-visualization/paraview: version bump to 5.3.0

Package-Manager: Portage-2.3.5, Repoman-2.3.2

 sci-visualization/paraview/Manifest                |   1 +
 .../files/paraview-5.3.0-fix_buildsystem.patch     |  24 ++
 sci-visualization/paraview/paraview-5.3.0.ebuild   | 286 +++++++++++++++++++++
 3 files changed, 311 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 3e38d76c5b2..b6f448c2b83 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1 +1,2 @@
 DIST ParaView-v5.2.0.tar.gz 47087129 SHA256 894e42ef8475bb49e4e7e64f4ee2c37c714facd18bfbb1d6de7f69676b062c96 SHA512 d46b71a03717bde164fe2b6cdcc1c478384ad0d379e203e75e69e1532f8703b4ce12f8992d39e61d09e2ad7bbf1e249fc1f00c4cdd65aabef831e0dca83485f1 WHIRLPOOL bfc63e95d899e9d7be5432f5e6b6e7a68731726b199a7dd897a4bcbe242537fa5cf2210d20ef4c725ab8af92609b0fb875078ec537577a074672776771f4fd2f
+DIST ParaView-v5.3.0.tar.gz 45173528 SHA256 046631bbf00775edc927314a3db207509666c9c6aadc7079e5159440fd2f88a0 SHA512 3dc3c2a1c27a0f0dc82fc04ce84477a26aacb329d6ea42c276c4204e39d11bc78adbc1807e1e7168aade31aa48b6d628775841b8b94b5122084eac46e358a23f WHIRLPOOL b69945d2f260a2419339bb289eaca252f018557c520c96fb64c0625e72587e2f3f159fff83b845f29d7de55f50547463cca9b7fe6d0920a2f95cb58a707930b3

diff --git a/sci-visualization/paraview/files/paraview-5.3.0-fix_buildsystem.patch b/sci-visualization/paraview/files/paraview-5.3.0-fix_buildsystem.patch
new file mode 100644
index 00000000000..600c7d43744
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.3.0-fix_buildsystem.patch
@@ -0,0 +1,24 @@
+From dcc3d775bddc270aa1a4d06f85807979ab0c8358 Mon Sep 17 00:00:00 2001
+From: Matthias Maier <tamiko@kyomu.43-1.org>
+Date: Thu, 1 Jun 2017 02:27:16 -0500
+Subject: [PATCH] fix buildsystem
+
+---
+ VTK/Utilities/Doxygen/CMakeLists.txt | 3 ---
+ 1 file changed, 3 deletions(-)
+
+diff --git a/VTK/Utilities/Doxygen/CMakeLists.txt b/VTK/Utilities/Doxygen/CMakeLists.txt
+index 3f285f6..7ebf3ee 100644
+--- a/VTK/Utilities/Doxygen/CMakeLists.txt
++++ b/VTK/Utilities/Doxygen/CMakeLists.txt
+@@ -80,7 +80,4 @@ if(NOT VTK_INSTALL_NO_DOCUMENTATION)
+   install(FILES doc_readme.txt
+     DESTINATION ${VTK_INSTALL_DOXYGEN_DIR}
+     COMPONENT Development)
+-  install(DIRECTORY ${VTK_BINARY_DIR}/Utilities/Doxygen/doc/html
+-      DESTINATION ${VTK_INSTALL_DOXYGEN_DIR}
+-      COMPONENT Development)
+ endif()
+-- 
+2.13.0
+

diff --git a/sci-visualization/paraview/paraview-5.3.0.ebuild b/sci-visualization/paraview/paraview-5.3.0.ebuild
new file mode 100644
index 00000000000..221ba8da925
--- /dev/null
+++ b/sci-visualization/paraview/paraview-5.3.0.ebuild
@@ -0,0 +1,286 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs versionator
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	dev-libs/protobuf
+	media-libs/freetype
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/jpeg:0
+	virtual/opengl
+	virtual/glu
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt5
+			dev-qt/qtgui:5[-gles2]
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/twisted-core
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py )
+		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt5? (
+		dev-qt/designer:5
+		dev-qt/qtgui:5[-gles2]
+		dev-qt/qthelp:5
+		dev-qt/qtopengl:5[-gles2]
+		dev-qt/qtsql:5
+		dev-qt/qttest:5
+		dev-qt/qtwebkit:5
+		dev-qt/qtx11extras:5
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	${PYTHON_DEPS}
+	>=dev-util/cmake-3.4
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
+	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
+)
+
+pkg_pretend() {
+	if [[ ${MERGE_TYPE} != "binary" ]] && use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
+		eerror "For USE=openmp a gcc with openmp support is required"
+		eerror
+		return 1
+	fi
+}
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+
+	default
+	epatch "${PATCHES[@]}"
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
+	sed -i \
+		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
+		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		CMakeLists.txt \
+		ParaViewConfig.cmake.in \
+		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
+		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
+		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx || die
+
+	# no proper switch
+	use nvcontrol || {
+		sed -i \
+			-e '/VTK_USE_NVCONTROL/s#1#0#' \
+			VTK/Rendering/OpenGL/CMakeLists.txt || die
+	}
+}
+
+src_configure() {
+	if use qt5; then
+		export QT_SELECT=qt5
+	fi
+
+	# VTK_USE_SYSTEM_QTTESTING
+	# PARAVIEW_USE_SYSTEM_AUTOBAHN
+	local mycmakeargs=(
+		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DCMAKE_USE_PTHREADS=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DPARAVIEW_USE_SYSTEM_MPI4PY=ON
+		-DPROTOC_LOCATION=$(type -P protoc)
+		-DVTK_Group_StandAlone=ON
+		-DVTK_RENDERING_BACKEND=OpenGL2
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DVTK_USE_OFFSCREEN=TRUE
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=OFF
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_TWISTED=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		-DVTK_USE_SYSTEM_ZOPE=ON
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	# TODO: XDMF_USE_MYSQL?
+	# VTK_WRAP_JAVA
+	mycmakeargs+=(
+		$(cmake-utils_use development PARAVIEW_INSTALL_DEVELOPMENT_FILES)
+		$(cmake-utils_use qt5 PARAVIEW_BUILD_QT_GUI)
+		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
+		$(cmake-utils_use qt5 Module_vtkGUISupportQtOpenGL)
+		$(cmake-utils_use qt5 Module_vtkGUISupportQtSQL)
+		$(cmake-utils_use qt5 Module_vtkGUISupportQtWebkit)
+		$(cmake-utils_use qt5 Module_vtkRenderingQt)
+		$(cmake-utils_use qt5 Module_vtkViewsQt)
+		$(cmake-utils_use qt5 VTK_Group_ParaViewQt)
+		$(cmake-utils_use qt5 VTK_Group_Qt)
+		$(cmake-utils_use !qt5 PQWIDGETS_DISABLE_QTWEBKIT)
+		$(cmake-utils_use boost Module_vtkInfovisBoost)
+		$(cmake-utils_use boost Module_vtkInfovisBoostGraphAlg)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI)
+		$(cmake-utils_use mpi PARAVIEW_USE_MPI_SSEND)
+		$(cmake-utils_use mpi PARAVIEW_USE_ICE_T)
+		$(cmake-utils_use mpi VTK_Group_MPI)
+		$(cmake-utils_use mpi VTK_XDMF_USE_MPI)
+		$(cmake-utils_use mpi XDMF_BUILD_MPI)
+		$(cmake-utils_use python PARAVIEW_ENABLE_PYTHON)
+		$(cmake-utils_use python VTK_Group_ParaViewPython)
+		$(cmake-utils_use python XDMF_WRAP_PYTHON)
+		$(cmake-utils_use python Module_vtkPython)
+		$(cmake-utils_use python Module_pqPython)
+		$(cmake-utils_use python Module_vtkWrappingPythonCore)
+		$(cmake-utils_use python Module_vtkPVPythonSupport)
+		$(cmake-utils_use python Module_AutobahnPython)
+		$(cmake-utils_use python Module_Twisted)
+		$(cmake-utils_use python Module_ZopeInterface)
+		$(cmake-utils_use python Module_vtkmpi4py)
+		$(usex qt5 "$(cmake-utils_use python Module_pqPython)" "-DModule_pqPython=OFF")
+		$(cmake-utils_use doc BUILD_DOCUMENTATION)
+		$(cmake-utils_use doc PARAVIEW_BUILD_WEB_DOCUMENTATION)
+		$(cmake-utils_use examples BUILD_EXAMPLES)
+		$(cmake-utils_use cg VTK_USE_CG_SHADERS)
+		$(cmake-utils_use mysql Module_vtkIOMySQL)
+		$(cmake-utils_use sqlite Module_vtksqlite)
+		$(cmake-utils_use coprocessing PARAVIEW_ENABLE_CATALYST)
+		$(cmake-utils_use ffmpeg PARAVIEW_ENABLE_FFMPEG)
+		$(cmake-utils_use ffmpeg VTK_USE_FFMPEG_ENCODER)
+		$(cmake-utils_use ffmpeg Module_vtkIOFFMPEG)
+		$(cmake-utils_use tk VTK_Group_Tk)
+		$(cmake-utils_use tk VTK_USE_TK)
+		$(cmake-utils_use tk Module_vtkRenderingTk)
+		$(cmake-utils_use tcl Module_vtkTclTk)
+		$(cmake-utils_use tcl Module_vtkWrappingTcl)
+		$(cmake-utils_use test BUILD_TESTING)
+		)
+
+	if use openmp; then
+		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
+	fi
+
+	if use qt5 ; then
+		mycmakeargs+=( -DVTK_INSTALL_QT_DIR=/${PVLIBDIR}/plugins/designer )
+		if use python ; then
+			# paraview cannot guess sip directory properly
+			mycmakeargs+=( -DSIP_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" )
+		fi
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AdiosReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ArrowGlyph)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_EyeDomeLighting)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_ForceTime)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_GMVReader)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_H5PartReader)
+		$(cmake-utils_use plugins RAVIEW_BUILD_PLUGIN_MobileRemoteControl)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_Moments)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_NonOrthogonalSource)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PacMan)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PointSprite)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_PrismPlugin)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_QuadView)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SLACTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SciberQuestToolKit)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SierraPlotTools)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_StreamingParticles)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_SurfaceLIC)
+		$(cmake-utils_use plugins PARAVIEW_BUILD_PLUGIN_UncertaintyRendering)
+		# these are always needed for plugins
+		$(cmake-utils_use plugins Module_vtkFiltersFlowPaths)
+		$(cmake-utils_use plugins Module_vtkPVServerManagerApplication)
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2018-07-08  2:57 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2018-07-08  2:57 UTC (permalink / raw
  To: gentoo-commits

commit:     01a37861b1cc39f1b86581e4cdf38d5be563df5e
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Jul  8 02:55:45 2018 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Jul  8 02:56:42 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=01a37861

sci-visualization/paraview: drop old

Closes: https://bugs.gentoo.org/660654
Package-Manager: Portage-2.3.41, Repoman-2.3.9

 sci-visualization/paraview/Manifest                |   1 -
 .../files/paraview-5.4.1-jsoncpp_1.8.4.patch       |  17 --
 sci-visualization/paraview/paraview-5.4.1.ebuild   | 282 ---------------------
 3 files changed, 300 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 7c9055385da..93c27c17c6e 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1 @@
-DIST ParaView-v5.4.1.tar.gz 43783720 BLAKE2B 2197d7f390b7192eb58ad67b88c84119da35fc4229547a42ef12a600874304addb410d0a53684a785855f617011762bf6a819231821f0bff8ee226111df8e577 SHA512 6a720f9ed9e03b7b97f0e84bb6d67b2a28c4ffc5079427d544e9522ce313264eed273c9b7ae13b11e34ab4de903132a22bacc337452d1e9da9876416449520f5
 DIST ParaView-v5.5.2.tar.gz 51418473 BLAKE2B 3300ccbd3fdb522889e9689bd3ad3b37602168658332438d1403f0fcd235722b1751e5acdf01536e4398d759ad26abc4d87f98902f09f64e067a1025e4dcd7a3 SHA512 3150d01cdeaf04aba449b7ffdc22d425d4bace8f17923b56aaf9393695e61fc96406ca49a9ca33ff57f1a2b94a3111b080d4fce5763cce5d082cfbc5c68ea94a

diff --git a/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch b/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch
deleted file mode 100644
index b4b64e94eef..00000000000
--- a/sci-visualization/paraview/files/paraview-5.4.1-jsoncpp_1.8.4.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-diff --git a/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx b/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
-index b6e2b55..d27ad9d 100644
---- a/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
-+++ b/ParaViewCore/ServerManager/Core/vtkSMSettings.cxx
-@@ -788,7 +788,10 @@ public:
-           this->GetSettingBelowPriority(propertySettingCString, highestPriority);
-         if (lowerPriorityValue.isNull())
-         {
--          if (!proxyValue.removeMember(property->GetXMLName()).isNull())
-+          // Allocated as done in Json::Value removeMember(const char* key).
-+          Json::Value removedValue;
-+          if (proxyValue.removeMember(property->GetXMLName(), &removedValue) &&
-+            !removedValue.isNull())
-           {
-             this->Modified();
-           }
-

diff --git a/sci-visualization/paraview/paraview-5.4.1.ebuild b/sci-visualization/paraview/paraview-5.4.1.ebuild
deleted file mode 100644
index f1b68b99b8a..00000000000
--- a/sci-visualization/paraview/paraview-5.4.1.ebuild
+++ /dev/null
@@ -1,282 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs versionator
-
-MAIN_PV=$(get_major_version)
-MAJOR_PV=$(get_version_component_range 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="ParaView is a powerful scientific data visualization application"
-HOMEPAGE="http://www.paraview.org"
-SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-RESTRICT="mirror"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
-RESTRICT="test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sci-libs/xdmf2
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	virtual/opengl
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5[-gles2]
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( virtual/mysql )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/constantly[${PYTHON_USEDEP}]
-		dev-python/incremental[${PYTHON_USEDEP}]
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/pygments[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/six[${PYTHON_USEDEP}]
-		dev-python/twisted-core[${PYTHON_USEDEP}]
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2]
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebkit:5
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	>=dev-util/cmake-3.4
-	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
-	"${FILESDIR}"/${P}-jsoncpp_1.8.4.patch
-)
-
-pkg_pretend() {
-	if [[ ${MERGE_TYPE} != "binary" ]] && use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
-		eerror "For USE=openmp a gcc with openmp support is required"
-		eerror
-		return 1
-	fi
-}
-
-pkg_setup() {
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	cmake-utils_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/usr/lib:${EPREFIX}/usr/$(get_libdir):g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/CMakeLists.txt || die
-	sed -i \
-		-e "s:\/lib\/python:\/$(get_libdir)\/python:g" \
-		 VTK/ThirdParty/xdmf2/vtkxdmf2/CMake/setup_install_paths.py || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		CMakeLists.txt \
-		ParaViewConfig.cmake.in \
-		CoProcessing/PythonCatalyst/vtkCPPythonScriptPipeline.cxx \
-		ParaViewCore/ClientServerCore/Core/vtkProcessModuleInitializePython.h \
-		ParaViewCore/ClientServerCore/Core/vtkPVPluginTracker.cxx || die
-
-	# no proper switch
-	if ! use nvcontrol; then
-		sed -i \
-			-e '/VTK_USE_NVCONTROL/s#1#0#' \
-			VTK/Rendering/OpenGL/CMakeLists.txt || die
-	fi
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	local mycmakeargs=(
-		-DPV_INSTALL_LIB_DIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DVTK_Group_StandAlone=ON
-		-DVTK_RENDERING_BACKEND=OpenGL2
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DVTK_USE_OFFSCREEN=TRUE
-		# -DVTK_USE_SYSTEM_AUTOBAHN once we transitioned to Python 3...
-		-DVTK_USE_SYSTEM_CGNS=ON
-		-DVTK_USE_SYSTEM_PUGIXML=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_GLEW=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_INCREMENTAL=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBHARU=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_LZ4=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	mycmakeargs+=(
-		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
-
-		-DModule_vtkGUISupportQtOpenGL="$(usex qt5)"
-		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
-		-DModule_vtkGUISupportQtWebkit="$(usex qt5)"
-		-DModule_vtkRenderingQt="$(usex qt5)"
-		-DModule_vtkViewsQt="$(usex qt5)"
-		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
-		-DVTK_Group_ParaViewQt="$(usex qt5)"
-		-DVTK_Group_Qt="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-
-		-DModule_vtkInfovisBoost="$(usex boost)"
-
-		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
-		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DVTK_Group_MPI="$(usex mpi)"
-		-DVTK_XDMF_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-
-		-DModule_AutobahnPython="$(usex python)"
-		-DModule_pqPython="$(usex python)"
-		-DModule_Twisted="$(usex python)"
-		-DModule_vtkmpi4py="$(usex python)"
-		-DModule_vtkPython="$(usex python)"
-		-DModule_vtkWrappingPythonCore="$(usex python)"
-		-DModule_ZopeInterface="$(usex python)"
-		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
-		-DXDMF_WRAP_PYTHON="$(usex python)"
-
-		-DBUILD_DOCUMENTATION="$(usex doc)"
-
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		-DModule_vtkIOMySQL="$(usex mysql)"
-
-		-DModule_vtksqlite="$(usex sqlite)"
-
-		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
-
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
-
-		-DVTK_Group_Tk="$(usex tk)"
-		-DVTK_USE_TK="$(usex tk)"
-		-DModule_vtkRenderingTk="$(usex tk)"
-		-DModule_vtkTclTk="$(usex tcl)"
-		-DModule_vtkWrappingTcl="$(usex tcl)"
-		-DBUILD_TESTING="$(usex test)"
-		)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
-		# these are always needed for plugins
-		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
-		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2018-07-15 16:09 Andreas Sturmlechner
  0 siblings, 0 replies; 15+ messages in thread
From: Andreas Sturmlechner @ 2018-07-15 16:09 UTC (permalink / raw
  To: gentoo-commits

commit:     cd51ce629612c468a58d64303e6ec94d6e9c0e56
Author:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Sun Jul 15 08:54:42 2018 +0000
Commit:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Sun Jul 15 16:08:54 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cd51ce62

sci-visualization/paraview: Fix build with Qt 5.11

Closes: https://bugs.gentoo.org/660798
Package-Manager: Portage-2.3.41, Repoman-2.3.9

 .../paraview/files/paraview-5.5.2-qt-5.11.patch    | 142 +++++++++++++++++++++
 sci-visualization/paraview/paraview-5.5.2.ebuild   |   1 +
 2 files changed, 143 insertions(+)

diff --git a/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch b/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch
new file mode 100644
index 00000000000..b4299d4ee37
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch
@@ -0,0 +1,142 @@
+From 931c779dde8460fe32aa8a3d19956b175b96e4f9 Mon Sep 17 00:00:00 2001
+From: Robert O'Bara <bob.obara@kitware.com>
+Date: Thu, 24 May 2018 09:49:28 -0400
+Subject: [PATCH] ENH: Changes needed to support Qt 5.11
+
+Basically needed to add missing header files.
+---
+ Plugins/SLACTools/pqSLACDataLoadManager.cxx                     | 1 +
+ Qt/ApplicationComponents/pqColorMapEditor.cxx                   | 1 +
+ Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx  | 1 +
+ .../pqStandardViewFrameActionsImplementation.cxx                | 1 +
+ Qt/ApplicationComponents/pqTimeInspectorWidget.cxx              | 1 +
+ .../pqTransferFunctionWidgetPropertyDialog.cxx                  | 2 ++
+ Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx     | 1 +
+ Qt/Components/pqChangeInputDialog.cxx                           | 1 +
+ Qt/Components/pqCinemaTrackSelection.cxx                        | 1 +
+ Qt/Python/pqPythonShell.cxx                                     | 1 +
+ 10 files changed, 11 insertions(+)
+
+diff --git a/Plugins/SLACTools/pqSLACDataLoadManager.cxx b/Plugins/SLACTools/pqSLACDataLoadManager.cxx
+index 3ba019c26b..ce38396f68 100644
+--- a/Plugins/SLACTools/pqSLACDataLoadManager.cxx
++++ b/Plugins/SLACTools/pqSLACDataLoadManager.cxx
+@@ -34,6 +34,7 @@
+ #include "vtkSMProperty.h"
+ #include "vtkSMSourceProxy.h"
+ 
++#include <QAction>
+ #include <QPushButton>
+ #include <QtDebug>
+ 
+diff --git a/Qt/ApplicationComponents/pqColorMapEditor.cxx b/Qt/ApplicationComponents/pqColorMapEditor.cxx
+index 0395185e0a..88b56745eb 100644
+--- a/Qt/ApplicationComponents/pqColorMapEditor.cxx
++++ b/Qt/ApplicationComponents/pqColorMapEditor.cxx
+@@ -59,6 +59,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include <QDebug>
+ #include <QKeyEvent>
+ #include <QPointer>
++#include <QStyle>
+ #include <QVBoxLayout>
+ 
+ class pqColorMapEditor::pqInternals
+diff --git a/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx b/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
+index 908e4598e0..820361a2b3 100644
+--- a/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
++++ b/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
+@@ -43,6 +43,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkSMUncheckedPropertyHelper.h"
+ 
+ #include <QGridLayout>
++#include <QStyle>
+ 
+ class pqDoubleRangeSliderPropertyWidget::pqInternals
+ {
+diff --git a/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx b/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
+index c297dc3d9e..501633f63a 100644
+--- a/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
++++ b/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
+@@ -69,6 +69,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include <QPushButton>
+ #include <QSet>
+ #include <QShortcut>
++#include <QStyle>
+ 
+ //-----------------------------------------------------------------------------
+ pqStandardViewFrameActionsImplementation::pqStandardViewFrameActionsImplementation(
+diff --git a/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx b/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
+index 6774c2e48e..e85e614f04 100644
+--- a/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
++++ b/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
+@@ -49,6 +49,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkSMPropertyHelper.h"
+ #include "vtkSMSourceProxy.h"
+ 
++#include <QHeaderView>
+ #include <QLineF>
+ #include <QPainter>
+ #include <QVariant>
+diff --git a/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx b/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
+index 55d3146447..93cd995d92 100644
+--- a/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
++++ b/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
+@@ -36,6 +36,8 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkPiecewiseFunction.h"
+ #include <QString>
+ 
++#include <QDoubleValidator>
++
+ class pqTransferFunctionWidgetPropertyDialog::pqInternals
+ {
+ public:
+diff --git a/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx b/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
+index 6d2865431e..8d2c4b61cd 100644
+--- a/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
++++ b/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
+@@ -39,6 +39,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkSMProxy.h"
+ 
+ #include <QIntValidator>
++#include <QStyle>
+ 
+ class pqViewResolutionPropertyWidget::pqInternals
+ {
+diff --git a/Qt/Components/pqChangeInputDialog.cxx b/Qt/Components/pqChangeInputDialog.cxx
+index 8a67b10095..86db3de01c 100644
+--- a/Qt/Components/pqChangeInputDialog.cxx
++++ b/Qt/Components/pqChangeInputDialog.cxx
+@@ -45,6 +45,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkSMProxy.h"
+ #include "vtkSmartPointer.h"
+ 
++#include <QHeaderView>
+ #include <QItemSelectionModel>
+ #include <QLineEdit>
+ #include <QRadioButton>
+diff --git a/Qt/Components/pqCinemaTrackSelection.cxx b/Qt/Components/pqCinemaTrackSelection.cxx
+index 3d6d9dde19..eea2e37680 100644
+--- a/Qt/Components/pqCinemaTrackSelection.cxx
++++ b/Qt/Components/pqCinemaTrackSelection.cxx
+@@ -30,6 +30,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ 
+ ========================================================================*/
+ #include <QDebug>
++#include <QHeaderView>
+ 
+ #include "vtkPVArrayInformation.h"
+ #include "vtkPVDataInformation.h"
+diff --git a/Qt/Python/pqPythonShell.cxx b/Qt/Python/pqPythonShell.cxx
+index 3d01fd0a96..bc1a014936 100644
+--- a/Qt/Python/pqPythonShell.cxx
++++ b/Qt/Python/pqPythonShell.cxx
+@@ -52,6 +52,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ #include "vtkStringOutputWindow.h"
+ #include "vtkWeakPointer.h"
+ 
++#include <QAbstractItemView>
+ #include <QApplication>
+ #include <QCursor>
+ #include <QFile>
+-- 
+2.17.1

diff --git a/sci-visualization/paraview/paraview-5.5.2.ebuild b/sci-visualization/paraview/paraview-5.5.2.ebuild
index b34d4ec9805..01c949e0ed1 100644
--- a/sci-visualization/paraview/paraview-5.5.2.ebuild
+++ b/sci-visualization/paraview/paraview-5.5.2.ebuild
@@ -99,6 +99,7 @@ PATCHES=(
 	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
 	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
 	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+	"${FILESDIR}"/${P}-qt-5.11.patch
 )
 
 pkg_pretend() {


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2019-06-30 18:20 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2019-06-30 18:20 UTC (permalink / raw
  To: gentoo-commits

commit:     dc620c1481998584ba8269585d82f04fe980fffa
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 30 14:48:09 2019 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Sun Jun 30 18:19:07 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dc620c14

sci-visualization/paraview: version bump to 5.6.1

 - Version bump to 5.6.1
 - OpenMP 4.0 compatibility
 - Fix various dependencies

Closes: https://bugs.gentoo.org/661860
Closes: https://bugs.gentoo.org/686362
Closes: https://bugs.gentoo.org/686990
Closes: https://bugs.gentoo.org/687534
Closes: https://bugs.gentoo.org/687790
Package-Manager: Portage-2.3.67, Repoman-2.3.16
Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   1 +
 .../files/paraview-5.6.1-fix_openmp_4.0.patch      |  32 +++
 sci-visualization/paraview/paraview-5.6.1.ebuild   | 312 +++++++++++++++++++++
 3 files changed, 345 insertions(+)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 9b7d008bf85..396d42620be 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1,3 @@
 DIST ParaView-v5.5.2.tar.gz 51418473 BLAKE2B 3300ccbd3fdb522889e9689bd3ad3b37602168658332438d1403f0fcd235722b1751e5acdf01536e4398d759ad26abc4d87f98902f09f64e067a1025e4dcd7a3 SHA512 3150d01cdeaf04aba449b7ffdc22d425d4bace8f17923b56aaf9393695e61fc96406ca49a9ca33ff57f1a2b94a3111b080d4fce5763cce5d082cfbc5c68ea94a
 DIST ParaView-v5.6.0.tar.gz 54085457 BLAKE2B a99a320f87af19ad4d39336e148f4ab1989225111299341ff3ebb095c652f1392362e42ce90dab8fe7390c44f9200637e76c1076e07d61c7e6cd4aad93df3a83 SHA512 4d7c1b9f5781411cdd290a0ef105221deca1af28bb29b8e6e6c077f3377b110e7c86637c11514559d2d826d36f189d5b5c1caa9e5f9c53820cf35c3ade1ae1f6
+DIST ParaView-v5.6.1.tar.xz 38756076 BLAKE2B 65515a61493e5b9518c42b8b255c59086629bc863de9bfd5651b06ea96dce108ce93f559192d76411bfacaa93660add8ee181e68c46e36ba26b65d32dc141534 SHA512 33ca0b29d4dae8f2ecdad3148c30b5cecb4dc64a4fc898206f5f855cacbc18e554c86d6e259b39fb2f56d190cf76cdefe103009b233ce04ad2573caa34b9ca45

diff --git a/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch b/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch
new file mode 100644
index 00000000000..51562415031
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch
@@ -0,0 +1,32 @@
+diff -urNd ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h ParaView-v5.6.0-openmp/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h
+--- ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h	2018-11-07 05:05:18.000000000 +1000
++++ ParaView-v5.6.0-openmp/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h	2019-06-28 14:04:02.292922908 +1000
+@@ -290,7 +290,7 @@
+     std::unique_ptr<ReturnType[]> threadData;
+ 
+     VTKM_OPENMP_DIRECTIVE(parallel default(none) firstprivate(f)
+-                            shared(data, doParallel, numThreads, threadData))
++                            shared(data, doParallel, numThreads, threadData, numVals))
+     {
+ 
+       int tid = omp_get_thread_num();
+@@ -422,7 +422,7 @@
+   vtkm::Id outIdx = 0;
+ 
+   VTKM_OPENMP_DIRECTIVE(parallel default(none) firstprivate(keysIn, valuesIn, keysOut, valuesOut, f)
+-                          shared(outIdx))
++                          shared(outIdx, numValues))
+   {
+     int tid = omp_get_thread_num();
+     int numThreads = omp_get_num_threads();
+diff -urNd ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h ParaView-v5.6.0-openmp/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h
+--- ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h	2018-11-07 05:05:18.000000000 +1000
++++ ParaView-v5.6.0-openmp/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h	2019-06-28 13:54:33.132064191 +1000
+@@ -133,6 +133,7 @@
+       VTKM_OPENMP_DIRECTIVE(parallel for
+                             default(none)
+                             firstprivate(valuesInPortal, indexPortal, valuesOutPortal)
++                            shared(size)
+                             schedule(static))
+       for (vtkm::Id i = 0; i < size; ++i)
+       {

diff --git a/sci-visualization/paraview/paraview-5.6.1.ebuild b/sci-visualization/paraview/paraview-5.6.1.ebuild
new file mode 100644
index 00000000000..a1cc1d76516
--- /dev/null
+++ b/sci-visualization/paraview/paraview-5.6.1.ebuild
@@ -0,0 +1,312 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_5,3_6} )
+inherit cmake-utils desktop gnome2-utils python-single-r1 toolchain-funcs
+
+MAIN_PV=$(ver_cut 0-1)
+MAJOR_PV=$(ver_cut 1-2)
+MY_P="ParaView-v${PV}"
+
+DESCRIPTION="Powerful scientific data visualization application"
+HOMEPAGE="https://www.paraview.org"
+SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp offscreen plugins python +qt5 sqlite tcl test tk"
+
+RESTRICT="mirror test"
+
+# "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )
+	?? ( offscreen qt5 )"
+
+RDEPEND="
+	app-arch/lz4
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	dev-libs/protobuf:=
+	dev-libs/pugixml
+	media-libs/freetype
+	media-libs/glew:0
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/cgnslib
+	sci-libs/hdf5:=[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sys-libs/zlib
+	virtual/glu
+	virtual/jpeg:0
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt5
+			dev-qt/qtgui:5[-gles2]
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( dev-db/mysql-connector-c )
+	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
+	!offscreen? ( virtual/opengl )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/constantly[${PYTHON_USEDEP}]
+		dev-python/incremental[${PYTHON_USEDEP}]
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/pygments[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/six[${PYTHON_USEDEP}]
+		|| ( dev-python/twisted[${PYTHON_USEDEP}]
+			dev-python/twisted-core[${PYTHON_USEDEP}]
+		)
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py )
+		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt5? (
+		dev-qt/designer:5
+		dev-qt/qtgui:5[-gles2]
+		dev-qt/qthelp:5
+		dev-qt/qtopengl:5[-gles2]
+		dev-qt/qtsql:5
+		dev-qt/qttest:5
+		dev-qt/qtwebkit:5
+		dev-qt/qtx11extras:5
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	${PYTHON_DEPS}
+	boost? ( dev-libs/boost[mpi?,${PYTHON_USEDEP}] )
+	doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
+	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
+	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+	"${FILESDIR}"/${PN}-5.6.1-fix_openmp_4.0.patch
+)
+
+CMAKE_MAKEFILE_GENERATOR="emake" #579474
+
+pkg_setup() {
+	[[ ${MERGE_TYPE} != "binary" ]] && use openmp && tc-check-openmp
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+
+	# Bug #661812
+	mkdir -p Plugins/StreamLinesRepresentation/doc || die
+
+	cmake-utils_src_prepare
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/lib/python:/$(get_libdir)/python:g" \
+		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
+}
+
+src_configure() {
+	if use qt5; then
+		export QT_SELECT=qt5
+	fi
+
+	local mycmakeargs=(
+		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DBUILD_SHARED_LIBS=ON
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+
+		-DVTK_Group_StandAlone=ON
+		-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=TRUE
+
+		-DVTK_USE_OGGTHEORA_ENCODER=TRUE
+		-DVTK_USE_SYSTEM_CGNS=ON
+		-DVTK_USE_SYSTEM_PUGIXML=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
+		-DVTK_USE_SYSTEM_GLEW=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_LZ4=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF # does not compile with sci-libs/xdmf2-1.0_p141226
+		-DVTK_USE_SYSTEM_ZLIB=ON
+
+		# boost
+		-DModule_vtkInfovisBoost="$(usex boost)"
+
+		# coprocessing
+		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
+
+		# doc
+		-DBUILD_DOCUMENTATION="$(usex doc)"
+
+		# examples
+		-DBUILD_EXAMPLES="$(usex examples)"
+
+		# ffmpeg
+		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
+		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
+		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
+
+		# mpi
+		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
+		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
+		-DPARAVIEW_USE_MPI="$(usex mpi)"
+		-DVTK_Group_MPI="$(usex mpi)"
+		-DVTK_XDMF_USE_MPI="$(usex mpi)"
+		-DXDMF_BUILD_MPI="$(usex mpi)"
+
+		# mysql
+		-DModule_vtkIOMySQL="$(usex mysql)"
+
+		# offscreen
+		-DVTK_USE_X=$(usex !offscreen)
+		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
+		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
+
+		# plugins
+		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
+		# these are always needed for plugins
+		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
+		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
+		# force this module due to incorrect build system deps wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+
+		# python
+		-DModule_pqPython="$(usex python)"
+		-DModule_vtkmpi4py="$(usex python)"
+		-DModule_vtkPython="$(usex python)"
+		-DModule_vtkWrappingPythonCore="$(usex python)"
+		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
+		-DXDMF_WRAP_PYTHON="$(usex python)"
+
+		# qt5
+		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
+		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
+		-DModule_vtkRenderingQt="$(usex qt5)"
+		-DModule_vtkViewsQt="$(usex qt5)"
+		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
+		-DVTK_Group_ParaViewQt="$(usex qt5)"
+		-DVTK_Group_Qt="$(usex qt5)"
+		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
+		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
+		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
+
+		# sqlite
+		-DModule_vtksqlite="$(usex sqlite)"
+
+		# tcl
+		-DModule_vtkTclTk="$(usex tcl)"
+
+		# test
+		-DBUILD_TESTING="$(usex test)"
+
+		# tk
+		-DVTK_Group_Tk="$(usex tk)"
+		-DVTK_USE_TK="$(usex tk)"
+		-DModule_vtkRenderingTk="$(usex tk)"
+	)
+
+	if use openmp; then
+		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
+	fi
+
+	if use python; then
+		mycmakeargs+=(
+			-DVTK_USE_SYSTEM_TWISTED=ON
+			-DVTK_USE_SYSTEM_AUTOBAHN=ON
+			-DVTK_USE_SYSTEM_ZOPE=ON
+		)
+	fi
+
+	if use qt5; then
+		mycmakeargs+=(
+			-DVTK_USE_QVTK=ON
+			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+			-DVTK_QT_VERSION=5
+			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
+			-DQT_UIC_EXECUTABLE="$(qt5_get_bindir)/uic"
+			-DQT_QMAKE_EXECUTABLE="$(qt5_get_bindir)/qmake"
+			-DVTK_Group_Qt:BOOL=ON
+		)
+	fi
+
+	cmake-utils_src_configure
+}
+
+src_install() {
+	cmake-utils_src_install
+
+		# remove wrapper binaries and put the actual executable in place
+		for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
+			if [ -f "${ED}"/usr/lib/"$i" ]; then
+				mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
+			fi
+		done
+
+		# install libraries into correct directory respecting get_libdir:
+		mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
+		mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
+		mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
+		rmdir "${ED}"/usr/lib_tmp || die
+
+		# set up the environment
+		echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
+		doenvd "${T}"/40${PN}
+
+		newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+		make_desktop_entry paraview "Paraview" paraview
+
+		use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+	}
+
+	pkg_postinst() {
+		gnome2_icon_cache_update
+	}
+
+	pkg_postrm() {
+		gnome2_icon_cache_update
+	}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2019-08-05  0:08 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2019-08-05  0:08 UTC (permalink / raw
  To: gentoo-commits

commit:     ea2167810adac39a68b91f97cc3bdb4cff8b9c5e
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Sun Aug  4 22:49:25 2019 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Mon Aug  5 00:07:55 2019 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ea216781

sci-visualization/paraview: drop old

Package-Manager: Portage-2.3.70, Repoman-2.3.16
Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   2 -
 .../paraview/files/paraview-5.5.2-qt-5.11.patch    | 142 ----------
 sci-visualization/paraview/paraview-5.5.2.ebuild   | 284 -------------------
 .../paraview/paraview-5.6.0-r1.ebuild              | 309 ---------------------
 4 files changed, 737 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 396d42620be..c8a70e548ba 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,3 +1 @@
-DIST ParaView-v5.5.2.tar.gz 51418473 BLAKE2B 3300ccbd3fdb522889e9689bd3ad3b37602168658332438d1403f0fcd235722b1751e5acdf01536e4398d759ad26abc4d87f98902f09f64e067a1025e4dcd7a3 SHA512 3150d01cdeaf04aba449b7ffdc22d425d4bace8f17923b56aaf9393695e61fc96406ca49a9ca33ff57f1a2b94a3111b080d4fce5763cce5d082cfbc5c68ea94a
-DIST ParaView-v5.6.0.tar.gz 54085457 BLAKE2B a99a320f87af19ad4d39336e148f4ab1989225111299341ff3ebb095c652f1392362e42ce90dab8fe7390c44f9200637e76c1076e07d61c7e6cd4aad93df3a83 SHA512 4d7c1b9f5781411cdd290a0ef105221deca1af28bb29b8e6e6c077f3377b110e7c86637c11514559d2d826d36f189d5b5c1caa9e5f9c53820cf35c3ade1ae1f6
 DIST ParaView-v5.6.1.tar.xz 38756076 BLAKE2B 65515a61493e5b9518c42b8b255c59086629bc863de9bfd5651b06ea96dce108ce93f559192d76411bfacaa93660add8ee181e68c46e36ba26b65d32dc141534 SHA512 33ca0b29d4dae8f2ecdad3148c30b5cecb4dc64a4fc898206f5f855cacbc18e554c86d6e259b39fb2f56d190cf76cdefe103009b233ce04ad2573caa34b9ca45

diff --git a/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch b/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch
deleted file mode 100644
index b4299d4ee37..00000000000
--- a/sci-visualization/paraview/files/paraview-5.5.2-qt-5.11.patch
+++ /dev/null
@@ -1,142 +0,0 @@
-From 931c779dde8460fe32aa8a3d19956b175b96e4f9 Mon Sep 17 00:00:00 2001
-From: Robert O'Bara <bob.obara@kitware.com>
-Date: Thu, 24 May 2018 09:49:28 -0400
-Subject: [PATCH] ENH: Changes needed to support Qt 5.11
-
-Basically needed to add missing header files.
----
- Plugins/SLACTools/pqSLACDataLoadManager.cxx                     | 1 +
- Qt/ApplicationComponents/pqColorMapEditor.cxx                   | 1 +
- Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx  | 1 +
- .../pqStandardViewFrameActionsImplementation.cxx                | 1 +
- Qt/ApplicationComponents/pqTimeInspectorWidget.cxx              | 1 +
- .../pqTransferFunctionWidgetPropertyDialog.cxx                  | 2 ++
- Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx     | 1 +
- Qt/Components/pqChangeInputDialog.cxx                           | 1 +
- Qt/Components/pqCinemaTrackSelection.cxx                        | 1 +
- Qt/Python/pqPythonShell.cxx                                     | 1 +
- 10 files changed, 11 insertions(+)
-
-diff --git a/Plugins/SLACTools/pqSLACDataLoadManager.cxx b/Plugins/SLACTools/pqSLACDataLoadManager.cxx
-index 3ba019c26b..ce38396f68 100644
---- a/Plugins/SLACTools/pqSLACDataLoadManager.cxx
-+++ b/Plugins/SLACTools/pqSLACDataLoadManager.cxx
-@@ -34,6 +34,7 @@
- #include "vtkSMProperty.h"
- #include "vtkSMSourceProxy.h"
- 
-+#include <QAction>
- #include <QPushButton>
- #include <QtDebug>
- 
-diff --git a/Qt/ApplicationComponents/pqColorMapEditor.cxx b/Qt/ApplicationComponents/pqColorMapEditor.cxx
-index 0395185e0a..88b56745eb 100644
---- a/Qt/ApplicationComponents/pqColorMapEditor.cxx
-+++ b/Qt/ApplicationComponents/pqColorMapEditor.cxx
-@@ -59,6 +59,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include <QDebug>
- #include <QKeyEvent>
- #include <QPointer>
-+#include <QStyle>
- #include <QVBoxLayout>
- 
- class pqColorMapEditor::pqInternals
-diff --git a/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx b/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
-index 908e4598e0..820361a2b3 100644
---- a/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
-+++ b/Qt/ApplicationComponents/pqDoubleRangeSliderPropertyWidget.cxx
-@@ -43,6 +43,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkSMUncheckedPropertyHelper.h"
- 
- #include <QGridLayout>
-+#include <QStyle>
- 
- class pqDoubleRangeSliderPropertyWidget::pqInternals
- {
-diff --git a/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx b/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
-index c297dc3d9e..501633f63a 100644
---- a/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
-+++ b/Qt/ApplicationComponents/pqStandardViewFrameActionsImplementation.cxx
-@@ -69,6 +69,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include <QPushButton>
- #include <QSet>
- #include <QShortcut>
-+#include <QStyle>
- 
- //-----------------------------------------------------------------------------
- pqStandardViewFrameActionsImplementation::pqStandardViewFrameActionsImplementation(
-diff --git a/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx b/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
-index 6774c2e48e..e85e614f04 100644
---- a/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
-+++ b/Qt/ApplicationComponents/pqTimeInspectorWidget.cxx
-@@ -49,6 +49,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkSMPropertyHelper.h"
- #include "vtkSMSourceProxy.h"
- 
-+#include <QHeaderView>
- #include <QLineF>
- #include <QPainter>
- #include <QVariant>
-diff --git a/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx b/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
-index 55d3146447..93cd995d92 100644
---- a/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
-+++ b/Qt/ApplicationComponents/pqTransferFunctionWidgetPropertyDialog.cxx
-@@ -36,6 +36,8 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkPiecewiseFunction.h"
- #include <QString>
- 
-+#include <QDoubleValidator>
-+
- class pqTransferFunctionWidgetPropertyDialog::pqInternals
- {
- public:
-diff --git a/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx b/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
-index 6d2865431e..8d2c4b61cd 100644
---- a/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
-+++ b/Qt/ApplicationComponents/pqViewResolutionPropertyWidget.cxx
-@@ -39,6 +39,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkSMProxy.h"
- 
- #include <QIntValidator>
-+#include <QStyle>
- 
- class pqViewResolutionPropertyWidget::pqInternals
- {
-diff --git a/Qt/Components/pqChangeInputDialog.cxx b/Qt/Components/pqChangeInputDialog.cxx
-index 8a67b10095..86db3de01c 100644
---- a/Qt/Components/pqChangeInputDialog.cxx
-+++ b/Qt/Components/pqChangeInputDialog.cxx
-@@ -45,6 +45,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkSMProxy.h"
- #include "vtkSmartPointer.h"
- 
-+#include <QHeaderView>
- #include <QItemSelectionModel>
- #include <QLineEdit>
- #include <QRadioButton>
-diff --git a/Qt/Components/pqCinemaTrackSelection.cxx b/Qt/Components/pqCinemaTrackSelection.cxx
-index 3d6d9dde19..eea2e37680 100644
---- a/Qt/Components/pqCinemaTrackSelection.cxx
-+++ b/Qt/Components/pqCinemaTrackSelection.cxx
-@@ -30,6 +30,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- 
- ========================================================================*/
- #include <QDebug>
-+#include <QHeaderView>
- 
- #include "vtkPVArrayInformation.h"
- #include "vtkPVDataInformation.h"
-diff --git a/Qt/Python/pqPythonShell.cxx b/Qt/Python/pqPythonShell.cxx
-index 3d01fd0a96..bc1a014936 100644
---- a/Qt/Python/pqPythonShell.cxx
-+++ b/Qt/Python/pqPythonShell.cxx
-@@ -52,6 +52,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- #include "vtkStringOutputWindow.h"
- #include "vtkWeakPointer.h"
- 
-+#include <QAbstractItemView>
- #include <QApplication>
- #include <QCursor>
- #include <QFile>
--- 
-2.17.1

diff --git a/sci-visualization/paraview/paraview-5.5.2.ebuild b/sci-visualization/paraview/paraview-5.5.2.ebuild
deleted file mode 100644
index 533032935e8..00000000000
--- a/sci-visualization/paraview/paraview-5.5.2.ebuild
+++ /dev/null
@@ -1,284 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-inherit cmake-utils desktop eapi7-ver gnome2-utils python-single-r1 toolchain-funcs
-
-MAIN_PV=$(ver_cut 0-1)
-MAJOR_PV=$(ver_cut 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
-
-RESTRICT="mirror test"
-
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	virtual/opengl
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5[-gles2]
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( dev-db/mysql-connector-c )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/constantly[${PYTHON_USEDEP}]
-		dev-python/incremental[${PYTHON_USEDEP}]
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/pygments[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/six[${PYTHON_USEDEP}]
-		|| ( dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/twisted-core[${PYTHON_USEDEP}]
-		)
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2]
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebkit:5
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? ( dev-libs/boost[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-	"${FILESDIR}"/${P}-qt-5.11.patch
-)
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != "binary" ]] && use openmp && tc-check-openmp
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake-utils_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-		-DBUILD_SHARED_LIBS=ON
-		-DCMAKE_COLOR_MAKEFILE=TRUE
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-		-DVTK_Group_StandAlone=ON
-		-DVTK_RENDERING_BACKEND=OpenGL2
-		-DVTK_USE_FFMPEG_ENCODER=OFF
-		-DVTK_USE_OFFSCREEN=TRUE
-		# -DVTK_USE_SYSTEM_AUTOBAHN once we transitioned to Python 3...
-		-DVTK_USE_SYSTEM_CGNS=ON
-		-DVTK_USE_SYSTEM_PUGIXML=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_GLEW=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_INCREMENTAL=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBHARU=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_LZ4=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_OGGTHEORA=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF # does not compile with sci-libs/xdmf2-1.0_p141226
-		-DVTK_USE_SYSTEM_ZLIB=ON
-		# force this module due to incorrect build system deps
-		# wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-		)
-
-	mycmakeargs+=(
-		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
-
-		-DModule_vtkGUISupportQtOpenGL="$(usex qt5)"
-		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
-		-DModule_vtkGUISupportQtWebkit="$(usex qt5)"
-		-DModule_vtkRenderingQt="$(usex qt5)"
-		-DModule_vtkViewsQt="$(usex qt5)"
-		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
-		-DVTK_Group_ParaViewQt="$(usex qt5)"
-		-DVTK_Group_Qt="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-
-		-DModule_vtkInfovisBoost="$(usex boost)"
-
-		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
-		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DVTK_Group_MPI="$(usex mpi)"
-		-DVTK_XDMF_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-
-		-DModule_AutobahnPython="$(usex python)"
-		-DModule_pqPython="$(usex python)"
-		-DModule_Twisted="$(usex python)"
-		-DModule_vtkmpi4py="$(usex python)"
-		-DModule_vtkPython="$(usex python)"
-		-DModule_vtkWrappingPythonCore="$(usex python)"
-		-DModule_ZopeInterface="$(usex python)"
-		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
-		-DXDMF_WRAP_PYTHON="$(usex python)"
-
-		-DBUILD_DOCUMENTATION="$(usex doc)"
-
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		-DModule_vtkIOMySQL="$(usex mysql)"
-
-		-DModule_vtksqlite="$(usex sqlite)"
-
-		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
-
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
-
-		-DVTK_Group_Tk="$(usex tk)"
-		-DVTK_USE_TK="$(usex tk)"
-		-DModule_vtkRenderingTk="$(usex tk)"
-		-DModule_vtkTclTk="$(usex tcl)"
-		-DModule_vtkWrappingTcl="$(usex tcl)"
-		-DBUILD_TESTING="$(usex test)"
-		)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	# TODO: MantaView VaporPlugin VRPlugin
-	mycmakeargs+=(
-		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
-		# these are always needed for plugins
-		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
-		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
-		)
-
-	cmake-utils_src_configure
-}
-
-src_install() {
-	cmake-utils_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# install libraries into correct directory respecting get_libdir:
-	mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
-	mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
-	mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
-	rmdir "${ED}"/usr/lib_tmp || die
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	gnome2_icon_cache_update
-}
-
-pkg_postrm() {
-	gnome2_icon_cache_update
-}

diff --git a/sci-visualization/paraview/paraview-5.6.0-r1.ebuild b/sci-visualization/paraview/paraview-5.6.0-r1.ebuild
deleted file mode 100644
index e566a2b7630..00000000000
--- a/sci-visualization/paraview/paraview-5.6.0-r1.ebuild
+++ /dev/null
@@ -1,309 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python{2_7,3_5,3_6} )
-inherit cmake-utils desktop gnome2-utils python-single-r1 qmake-utils toolchain-funcs
-
-MAIN_PV=$(ver_cut 0-1)
-MAJOR_PV=$(ver_cut 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp offscreen plugins python +qt5 sqlite tcl test tk"
-
-RESTRICT="mirror test"
-
-# "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )
-	?? ( offscreen qt5 )"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp
-	dev-libs/libxml2:2
-	dev-libs/protobuf
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5[-gles2]
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( dev-db/mysql-connector-c )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		dev-python/constantly[${PYTHON_USEDEP}]
-		dev-python/incremental[${PYTHON_USEDEP}]
-		dev-python/matplotlib[${PYTHON_USEDEP}]
-		dev-python/numpy[${PYTHON_USEDEP}]
-		dev-python/pygments[${PYTHON_USEDEP}]
-		dev-python/sip[${PYTHON_USEDEP}]
-		dev-python/six[${PYTHON_USEDEP}]
-		|| ( dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/twisted-core[${PYTHON_USEDEP}]
-		)
-		dev-python/zope-interface[${PYTHON_USEDEP}]
-		mpi? ( dev-python/mpi4py )
-		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2]
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebengine:5[widgets]
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? ( dev-libs/boost[mpi?,${PYTHON_USEDEP}] )
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-)
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != "binary" ]] && use openmp && tc-check-openmp
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake-utils_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DBUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		-DVTK_Group_StandAlone=ON
-		-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=TRUE
-
-		-DVTK_USE_OGGTHEORA_ENCODER=TRUE
-		-DVTK_USE_SYSTEM_CGNS=ON
-		-DVTK_USE_SYSTEM_PUGIXML=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_GLEW=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_LZ4=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF # does not compile with sci-libs/xdmf2-1.0_p141226
-		-DVTK_USE_SYSTEM_ZLIB=ON
-
-		# boost
-		-DModule_vtkInfovisBoost="$(usex boost)"
-
-		# coprocessing
-		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
-
-		# doc
-		-DBUILD_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
-		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DVTK_Group_MPI="$(usex mpi)"
-		-DVTK_XDMF_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-
-		# mysql
-		-DModule_vtkIOMySQL="$(usex mysql)"
-
-		# offscreen
-		-DVTK_USE_X=$(usex !offscreen)
-		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
-		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
-
-		# plugins
-		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
-		# these are always needed for plugins
-		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
-		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
-		# force this module due to incorrect build system deps wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DModule_vtkmpi4py="$(usex python)"
-		-DModule_vtkPython="$(usex python)"
-		-DModule_vtkWrappingPythonCore="$(usex python)"
-		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
-		-DXDMF_WRAP_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
-		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
-		-DModule_vtkRenderingQt="$(usex qt5)"
-		-DModule_vtkViewsQt="$(usex qt5)"
-		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
-		-DVTK_Group_ParaViewQt="$(usex qt5)"
-		-DVTK_Group_Qt="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-
-		# sqlite
-		-DModule_vtksqlite="$(usex sqlite)"
-
-		# tcl
-		-DModule_vtkTclTk="$(usex tcl)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_Group_Tk="$(usex tk)"
-		-DVTK_USE_TK="$(usex tk)"
-		-DModule_vtkRenderingTk="$(usex tk)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use python; then
-		mycmakeargs+=(
-			-DVTK_USE_SYSTEM_TWISTED=ON
-			-DVTK_USE_SYSTEM_AUTOBAHN=ON
-			-DVTK_USE_SYSTEM_ZOPE=ON
-		)
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DVTK_USE_QVTK=ON
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DVTK_QT_VERSION=5
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-DQT_UIC_EXECUTABLE="$(qt5_get_bindir)/uic"
-			-DQT_QMAKE_EXECUTABLE="$(qt5_get_bindir)/qmake"
-			-DVTK_Group_Qt:BOOL=ON
-		)
-	fi
-
-	cmake-utils_src_configure
-}
-
-src_install() {
-	cmake-utils_src_install
-
-		# remove wrapper binaries and put the actual executable in place
-		for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-			if [ -f "${ED}"/usr/lib/"$i" ]; then
-				mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-			fi
-		done
-
-		# install libraries into correct directory respecting get_libdir:
-		mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
-		mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
-		mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
-		rmdir "${ED}"/usr/lib_tmp || die
-
-		# set up the environment
-		echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-		doenvd "${T}"/40${PN}
-
-		newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-		make_desktop_entry paraview "Paraview" paraview
-
-		use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-	}
-
-	pkg_postinst() {
-		gnome2_icon_cache_update
-	}
-
-	pkg_postrm() {
-		gnome2_icon_cache_update
-	}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2020-04-03  2:49 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2020-04-03  2:49 UTC (permalink / raw
  To: gentoo-commits

commit:     9fcdb13aea164e1887a298a6ff5f718696762272
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Fri Apr  3 02:48:04 2020 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Fri Apr  3 02:48:40 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9fcdb13a

sci-visualization/paraview: drop old

Closes: https://bugs.gentoo.org/692674
Closes: https://bugs.gentoo.org/683896
Closes: https://bugs.gentoo.org/683810
Package-Manager: Portage-2.3.96, Repoman-2.3.22
Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   1 -
 .../files/paraview-5.6.1-fix_openmp_4.0.patch      |  81 ------
 .../paraview/paraview-5.6.1-r1.ebuild              | 315 ---------------------
 3 files changed, 397 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 1b17968014f..3173c63282b 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1 @@
-DIST ParaView-v5.6.1.tar.xz 38756076 BLAKE2B 65515a61493e5b9518c42b8b255c59086629bc863de9bfd5651b06ea96dce108ce93f559192d76411bfacaa93660add8ee181e68c46e36ba26b65d32dc141534 SHA512 33ca0b29d4dae8f2ecdad3148c30b5cecb4dc64a4fc898206f5f855cacbc18e554c86d6e259b39fb2f56d190cf76cdefe103009b233ce04ad2573caa34b9ca45
 DIST ParaView-v5.8.0.tar.xz 49789116 BLAKE2B 25689220f506221731bb5a56c647c249df0de8654a4b3347a7c09067bb5755818597bd7cfff88c2d129f448189b107079995c93599d482f7bf8b4cc6c7430e72 SHA512 43304d62c3f55bc390e68c033fb4c7dc2c0789d0dadbb98ef734b7d9de0419af4c240ce94f36e2b52c939ac950fba1d70dbd9fc3a1e6da37c7ef847b5c8682a2

diff --git a/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch b/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch
deleted file mode 100644
index cf215070893..00000000000
--- a/sci-visualization/paraview/files/paraview-5.6.1-fix_openmp_4.0.patch
+++ /dev/null
@@ -1,81 +0,0 @@
-From e30cb0872593d1614392817762b871de36e4c2f3 Mon Sep 17 00:00:00 2001
-From: Allison Vacanti <allison.vacanti@kitware.com>
-Date: Thu, 27 Jun 2019 16:04:53 -0400
-Subject: [PATCH] Fix OpenMP for gcc-9 backwards incompatibility.
-
-For details, see
-
-https://www.gnu.org/software/gcc/gcc-9/porting_to.html
----
- vtkm/cont/openmp/internal/FunctorsOpenMP.h     | 18 +++++++++++++++---
- vtkm/cont/openmp/internal/ParallelSortOpenMP.h |  4 +++-
- 2 files changed, 18 insertions(+), 4 deletions(-)
-
-diff --git ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h b/vtkm/cont/openmp/internal/FunctorsOpenMP.h
-index 27cd2bc0..0271754c 100644
---- ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h
-+++ ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/FunctorsOpenMP.h
-@@ -36,6 +36,18 @@
- #define VTKM_OPENMP_DIRECTIVE(directive)
- #endif // _OPENMP
- 
-+// See "OpenMP data sharing" section of
-+// https://www.gnu.org/software/gcc/gcc-9/porting_to.html. OpenMP broke
-+// backwards compatibility regarding const variable handling.
-+// tl;dr, put all const variables accessed from openmp blocks in a
-+// VTKM_OPENMP_SHARED_CONST(var1, var2, ...) macro. This will do The Right Thing
-+// on all gcc.
-+#if defined(__GNUC__) && __GNUC__ >= 9
-+#define VTKM_OPENMP_SHARED_CONST(...) shared(__VA_ARGS__)
-+#else
-+#define VTKM_OPENMP_SHARED_CONST(...)
-+#endif
-+
- // When defined, supported type / operator combinations will use the OpenMP
- // reduction(...) clause. Otherwise, all reductions use the general
- // implementation with a manual reduction once the threads complete.
-@@ -279,8 +291,8 @@ struct ReduceHelper
-     int numThreads = 0;
-     std::unique_ptr<ReturnType[]> threadData;
- 
--    VTKM_OPENMP_DIRECTIVE(parallel default(none) firstprivate(f)
--                            shared(data, doParallel, numThreads, threadData))
-+    VTKM_OPENMP_DIRECTIVE(parallel default(none) firstprivate(f) shared(
-+      data, doParallel, numThreads, threadData) VTKM_OPENMP_SHARED_CONST(numVals))
-     {
- 
-       int tid = omp_get_thread_num();
-@@ -412,7 +424,7 @@ void ReduceByKeyHelper(KeysInArray keysInArray,
-   vtkm::Id outIdx = 0;
- 
-   VTKM_OPENMP_DIRECTIVE(parallel default(none) firstprivate(keysIn, valuesIn, keysOut, valuesOut, f)
--                          shared(outIdx))
-+                          shared(outIdx) VTKM_OPENMP_SHARED_CONST(numValues))
-   {
-     int tid = omp_get_thread_num();
-     int numThreads = omp_get_num_threads();
-diff --git a/vtkm/cont/openmp/internal/ParallelSortOpenMP.h b/vtkm/cont/openmp/internal/ParallelSortOpenMP.h
-index e06d1762..a973eee6 100644
---- ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h
-+++ ParaView-v5.6.0/VTK/ThirdParty/vtkm/vtk-m/vtkm/cont/openmp/internal/ParallelSortOpenMP.h
-@@ -123,7 +123,8 @@ void parallel_sort_bykey(vtkm::cont::ArrayHandle<T, StorageT>& keys,
-       VTKM_OPENMP_DIRECTIVE(parallel for
-                             default(none)
-                             firstprivate(valuesInPortal, indexPortal, valuesOutPortal)
--                            schedule(static))
-+                            schedule(static)
-+                            VTKM_OPENMP_SHARED_CONST(size))
-       for (vtkm::Id i = 0; i < size; ++i)
-       {
-         valuesOutPortal.Set(i, valuesInPortal.Get(indexPortal.Get(i)));
-@@ -209,6 +210,7 @@ void parallel_sort_bykey(vtkm::cont::ArrayHandle<T, StorageT>& keys,
-     VTKM_OPENMP_DIRECTIVE(parallel for
-                           default(none)
-                           firstprivate(valuesInPortal, indexPortal, valuesOutPortal)
-+                          VTKM_OPENMP_SHARED_CONST(size)
-                           schedule(static))
-     for (vtkm::Id i = 0; i < size; ++i)
-     {
--- 
-2.21.0
-

diff --git a/sci-visualization/paraview/paraview-5.6.1-r1.ebuild b/sci-visualization/paraview/paraview-5.6.1-r1.ebuild
deleted file mode 100644
index 5a52eb5730f..00000000000
--- a/sci-visualization/paraview/paraview-5.6.1-r1.ebuild
+++ /dev/null
@@ -1,315 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_6 )
-inherit cmake-utils desktop gnome2-utils python-single-r1 qmake-utils toolchain-funcs
-
-MAIN_PV=$(ver_cut 0-1)
-MAJOR_PV=$(ver_cut 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-
-LICENSE="paraview GPL-2"
-KEYWORDS="~amd64 ~x86"
-SLOT="0"
-IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp offscreen plugins python +qt5 sqlite tcl test tk"
-
-RESTRICT="mirror test"
-
-# "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )
-	?? ( offscreen qt5 )"
-
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	coprocessing? (
-		plugins? (
-			dev-python/PyQt5
-			dev-qt/qtgui:5[-gles2]
-		)
-	)
-	ffmpeg? ( virtual/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( dev-db/mysql-connector-c )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_MULTI_USEDEP}]
-			dev-python/incremental[${PYTHON_MULTI_USEDEP}]
-			dev-python/matplotlib[${PYTHON_MULTI_USEDEP}]
-			dev-python/numpy[${PYTHON_MULTI_USEDEP}]
-			dev-python/pygments[${PYTHON_MULTI_USEDEP}]
-			dev-python/sip[${PYTHON_MULTI_USEDEP}]
-			dev-python/six[${PYTHON_MULTI_USEDEP}]
-			dev-python/twisted[${PYTHON_MULTI_USEDEP}]
-			dev-python/zope-interface[${PYTHON_MULTI_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/PyQt5[opengl,${PYTHON_MULTI_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2]
-		dev-qt/qtsql:5
-		dev-qt/qttest:5
-		dev-qt/qtwebengine:5[widgets]
-		dev-qt/qtx11extras:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tcl? ( dev-lang/tcl:0= )
-	tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,${PYTHON_MULTI_USEDEP}]
-		')
-	)
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-	"${FILESDIR}"/${PN}-5.6.1-fix_openmp_4.0.patch
-)
-
-CMAKE_MAKEFILE_GENERATOR="emake" #579474
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != "binary" ]] && use openmp && tc-check-openmp
-	python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake-utils_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	if use qt5; then
-		export QT_SELECT=qt5
-	fi
-
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
-		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
-		-DBUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		-DVTK_Group_StandAlone=ON
-		-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=TRUE
-
-		-DVTK_USE_OGGTHEORA_ENCODER=TRUE
-		-DVTK_USE_SYSTEM_CGNS=ON
-		-DVTK_USE_SYSTEM_PUGIXML=ON
-		-DVTK_USE_SYSTEM_EXPAT=ON
-		-DVTK_USE_SYSTEM_FREETYPE=ON
-		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
-		-DVTK_USE_SYSTEM_GLEW=ON
-		-DVTK_USE_SYSTEM_HDF5=ON
-		-DVTK_USE_SYSTEM_JPEG=ON
-		-DVTK_USE_SYSTEM_JSONCPP=ON
-		-DVTK_USE_SYSTEM_LIBXML2=ON
-		-DVTK_USE_SYSTEM_LZ4=ON
-		-DVTK_USE_SYSTEM_NETCDF=ON
-		-DVTK_USE_SYSTEM_PNG=ON
-		-DVTK_USE_SYSTEM_PROTOBUF=ON
-		-DVTK_USE_SYSTEM_TIFF=ON
-		-DVTK_USE_SYSTEM_XDMF2=OFF # does not compile with sci-libs/xdmf2-1.0_p141226
-		-DVTK_USE_SYSTEM_ZLIB=ON
-
-		# boost
-		-DModule_vtkInfovisBoost="$(usex boost)"
-
-		# coprocessing
-		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
-
-		# doc
-		-DBUILD_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
-		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DVTK_Group_MPI="$(usex mpi)"
-		-DVTK_XDMF_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-
-		# mysql
-		-DModule_vtkIOMySQL="$(usex mysql)"
-
-		# offscreen
-		-DVTK_USE_X=$(usex !offscreen)
-		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
-		-DVTK_OPENGL_HAS_OSMESA=$(usex offscreen)
-
-		# plugins
-		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
-		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
-		# these are always needed for plugins
-		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
-		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
-		# force this module due to incorrect build system deps wrt bug 460528
-		-DModule_vtkUtilitiesProcessXML=ON
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DModule_vtkmpi4py="$(usex python)"
-		-DModule_vtkPython="$(usex python)"
-		-DModule_vtkWrappingPythonCore="$(usex python)"
-		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
-		-DXDMF_WRAP_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
-		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
-		-DModule_vtkRenderingQt="$(usex qt5)"
-		-DModule_vtkViewsQt="$(usex qt5)"
-		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
-		-DVTK_Group_ParaViewQt="$(usex qt5)"
-		-DVTK_Group_Qt="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-
-		# sqlite
-		-DModule_vtksqlite="$(usex sqlite)"
-
-		# tcl
-		-DModule_vtkTclTk="$(usex tcl)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_Group_Tk="$(usex tk)"
-		-DVTK_USE_TK="$(usex tk)"
-		-DModule_vtkRenderingTk="$(usex tk)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use python; then
-		mycmakeargs+=(
-			-DVTK_USE_SYSTEM_TWISTED=ON
-			-DVTK_USE_SYSTEM_AUTOBAHN=ON
-			-DVTK_USE_SYSTEM_ZOPE=ON
-		)
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DVTK_USE_QVTK=ON
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DVTK_QT_VERSION=5
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-DQT_UIC_EXECUTABLE="$(qt5_get_bindir)/uic"
-			-DQT_QMAKE_EXECUTABLE="$(qt5_get_bindir)/qmake"
-			-DVTK_Group_Qt:BOOL=ON
-		)
-	fi
-
-	cmake-utils_src_configure
-}
-
-src_install() {
-	cmake-utils_src_install
-
-		# remove wrapper binaries and put the actual executable in place
-		for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-			if [ -f "${ED}"/usr/lib/"$i" ]; then
-				mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-			fi
-		done
-
-		# install libraries into correct directory respecting get_libdir:
-		mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
-		mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
-		mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
-		rmdir "${ED}"/usr/lib_tmp || die
-
-		# set up the environment
-		echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-		doenvd "${T}"/40${PN}
-
-		newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
-		make_desktop_entry paraview "Paraview" paraview
-
-		use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-	}
-
-	pkg_postinst() {
-		xdg_icon_cache_update
-	}
-
-	pkg_postrm() {
-		xdg_icon_cache_update
-	}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2020-11-25 16:10 Andreas Sturmlechner
  0 siblings, 0 replies; 15+ messages in thread
From: Andreas Sturmlechner @ 2020-11-25 16:10 UTC (permalink / raw
  To: gentoo-commits

commit:     9905e1b6a085a2fe98b550d775b8ba158f76d8fc
Author:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Wed Nov 25 15:56:59 2020 +0000
Commit:     Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Wed Nov 25 16:10:40 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9905e1b6

sci-visualization/paraview: Inject path to xmlpatterns, drop QT_SELECT

Closes: https://bugs.gentoo.org/755977
Package-Manager: Portage-3.0.10, Repoman-3.0.2
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>

 .../files/paraview-5.8.1-find-xmlpatterns.patch    | 38 ++++++++++++++++++++++
 sci-visualization/paraview/paraview-5.8.1.ebuild   |  2 ++
 2 files changed, 40 insertions(+)

diff --git a/sci-visualization/paraview/files/paraview-5.8.1-find-xmlpatterns.patch b/sci-visualization/paraview/files/paraview-5.8.1-find-xmlpatterns.patch
new file mode 100644
index 00000000000..b02107bad7a
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.8.1-find-xmlpatterns.patch
@@ -0,0 +1,38 @@
+From 7fe2ebc709ecb3e7f3b2aa6fc124dda0622541d4 Mon Sep 17 00:00:00 2001
+From: Andreas Sturmlechner <asturm@gentoo.org>
+Date: Wed, 25 Nov 2020 16:32:56 +0100
+Subject: [PATCH] Make qt_xmlpatterns_executable overridable
+
+So far this relies on fragile guessing of path or binary being in PATH.
+
+Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
+---
+ CMake/ParaViewClient.cmake | 12 +++++++-----
+ 1 file changed, 7 insertions(+), 5 deletions(-)
+
+diff --git a/CMake/ParaViewClient.cmake b/CMake/ParaViewClient.cmake
+index b0dea2b328..13b59cd744 100644
+--- a/CMake/ParaViewClient.cmake
++++ b/CMake/ParaViewClient.cmake
+@@ -512,11 +512,13 @@ function (paraview_client_documentation)
+   endif ()
+ 
+   include("${_ParaViewClient_cmake_dir}/paraview-find-package-helpers.cmake" OPTIONAL)
+-  find_program(qt_xmlpatterns_executable
+-    NAMES xmlpatterns-qt5 xmlpatterns
+-    HINTS "${Qt5_DIR}/../../../bin"
+-          "${Qt5_DIR}/../../../libexec/qt5/bin"
+-    DOC   "Path to xmlpatterns")
++  if (NOT qt_xmlpatterns_executable)
++    find_program(qt_xmlpatterns_executable
++      NAMES xmlpatterns-qt5 xmlpatterns
++      HINTS "${Qt5_DIR}/../../../bin"
++            "${Qt5_DIR}/../../../libexec/qt5/bin"
++      DOC   "Path to xmlpatterns")
++  endif ()
+   mark_as_advanced(qt_xmlpatterns_executable)
+ 
+   if (NOT qt_xmlpatterns_executable)
+-- 
+2.29.2
+

diff --git a/sci-visualization/paraview/paraview-5.8.1.ebuild b/sci-visualization/paraview/paraview-5.8.1.ebuild
index 7592f9d169a..d647fcf19ce 100644
--- a/sci-visualization/paraview/paraview-5.8.1.ebuild
+++ b/sci-visualization/paraview/paraview-5.8.1.ebuild
@@ -107,6 +107,7 @@ PATCHES=(
 	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
 	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
 	"${FILESDIR}"/${PN}-5.8.0-w-vtk-8.2.0-qt-5.15.patch # bug 729348
+	"${FILESDIR}"/${P}-find-xmlpatterns.patch # bug 755977, downstream patch
 )
 
 pkg_setup() {
@@ -217,6 +218,7 @@ src_configure() {
 			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
 			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
 			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
+			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
 		)
 	fi
 


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2022-05-25  5:33 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2022-05-25  5:33 UTC (permalink / raw
  To: gentoo-commits

commit:     21b10dcf8333205528a096a4ba5223ee0713be60
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Wed May 25 04:08:36 2022 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Wed May 25 05:32:24 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=21b10dcf

sci-visualization/paraview: drop 5.9.0, 5.9.1

Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 sci-visualization/paraview/Manifest                |   2 -
 .../files/paraview-4.0.1-xdmf-cstring.patch        |  12 --
 .../files/paraview-5.9.0-gcc11-include.patch       |  41 ----
 sci-visualization/paraview/paraview-5.9.0.ebuild   | 238 ---------------------
 sci-visualization/paraview/paraview-5.9.1.ebuild   | 238 ---------------------
 5 files changed, 531 deletions(-)

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 657b09e18500..30d39dae379e 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,3 +1 @@
 DIST ParaView-v5.10.1.tar.xz 70218088 BLAKE2B 3134c5df35994a3a153ebd97770066b9963911ae7fb1877681135e01a19c4a879306ae844ef3a29719be5cd509f35117f74eb3c264f1a101fa19180d9a126011 SHA512 1feb855432ea7bc40f77ee214e5877d5170e4f31f520dc7198d72a271506b65a4bc79922875d2c176e54219818a428497c606390a2b9da2770de403bd1593e6c
-DIST ParaView-v5.9.0.tar.xz 62784788 BLAKE2B f07bfce50304b2bfba0de4ba3127d686cf4c32633f8c707fbb2d93c19685f7e8a119ba211e27c29b986ca5b22afab4f57c273077a1c0a7ab0abefa55c8874e28 SHA512 44d93b49449262aa3f068aa990419415c3197916a002555d914efc407ed7ccd57b15b829f0fe711afee780e5e63fb1bd072175fc382f3afd36daecc541c382d5
-DIST ParaView-v5.9.1.tar.xz 62835572 BLAKE2B ba15771de9d972de533627ce3e2c74fd5f25df08884680ea6f1ceea0adb513c024f58e4436691bf17b11728f8e1c09f6ce1d55d9875729169dbc5f4b38c05de8 SHA512 d424e22d962f21c32971ca0001c10c266a1768713a3d0ae9d4c73dc83260c4661326cfbed7773845cf31dedc0474096ed9d6eb8a42ab7677cdde95f9f6abd2f2

diff --git a/sci-visualization/paraview/files/paraview-4.0.1-xdmf-cstring.patch b/sci-visualization/paraview/files/paraview-4.0.1-xdmf-cstring.patch
deleted file mode 100644
index 665f40ad4fa7..000000000000
--- a/sci-visualization/paraview/files/paraview-4.0.1-xdmf-cstring.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-gcc header fix
-
---- ParaView-3.98.0-src/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfObject.h
-+++ ParaView-3.98.0-src/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfObject.h
-@@ -82,6 +82,7 @@
- # ifdef UNIX
- #  include "sys/file.h"
- #  include "strings.h"
-+#  include <cstring>
- #  define STRCASECMP strcasecmp
- #  define STRNCASECMP strncasecmp
- #  define STRCMP strcmp

diff --git a/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch b/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch
deleted file mode 100644
index d5850073fb94..000000000000
--- a/sci-visualization/paraview/files/paraview-5.9.0-gcc11-include.patch
+++ /dev/null
@@ -1,41 +0,0 @@
-https://bugs.gentoo.org/789573
---- a/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h
-+++ b/VTK/Common/Core/vtkGenericDataArrayLookupHelper.h
-@@ -25,6 +25,7 @@
- #include "vtkIdList.h"
- #include <algorithm>
- #include <cmath>
-+#include <limits>
- #include <unordered_map>
- #include <vector>
- 
---- a/VTK/Common/DataModel/vtkPiecewiseFunction.cxx
-+++ b/VTK/Common/DataModel/vtkPiecewiseFunction.cxx
-@@ -22,6 +22,7 @@
- #include <cassert>
- #include <cmath>
- #include <iterator>
-+#include <limits>
- #include <set>
- #include <vector>
- 
---- a/VTK/Rendering/Core/vtkColorTransferFunction.cxx
-+++ b/VTK/Rendering/Core/vtkColorTransferFunction.cxx
-@@ -21,6 +21,7 @@
- #include <algorithm>
- #include <cmath>
- #include <iterator>
-+#include <limits>
- #include <set>
- #include <vector>
- 
---- a/VTK/Filters/HyperTree/vtkHyperTreeGridThreshold.cxx
-+++ b/VTK/Filters/HyperTree/vtkHyperTreeGridThreshold.cxx
-@@ -27,6 +27,7 @@
- #include "vtkHyperTreeGridNonOrientedCursor.h"
- 
- #include <cmath>
-+#include <limits>
- 
- vtkStandardNewMacro(vtkHyperTreeGridThreshold);
- 

diff --git a/sci-visualization/paraview/paraview-5.9.0.ebuild b/sci-visualization/paraview/paraview-5.9.0.ebuild
deleted file mode 100644
index f3ceac1728a1..000000000000
--- a/sci-visualization/paraview/paraview-5.9.0.ebuild
+++ /dev/null
@@ -1,238 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{8,9} )
-inherit cmake desktop python-single-r1 qmake-utils toolchain-funcs xdg-utils
-
-MAIN_PV=$(ver_cut 0-1)
-MAJOR_PV=$(ver_cut 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-
-LICENSE="paraview GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="boost cg doc examples ffmpeg mpi mysql nvcontrol openmp offscreen plugins python +qt5 +sqlite test tk +webengine"
-
-RESTRICT="mirror test"
-
-# "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-REQUIRED_USE="
-	python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )
-	webengine? ( qt5 )
-	qt5? ( sqlite )
-	?? ( offscreen qt5 )"
-
-# TODO: Verify that these two are not needed any more for the catalyst
-# module:
-#  - dev-python/PyQt5
-#  - dev-qt/qtgui:5[-gles2-only]
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	ffmpeg? ( media-video/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( dev-db/mysql-connector-c )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_USEDEP}]
-			dev-python/incremental[${PYTHON_USEDEP}]
-			dev-python/matplotlib[${PYTHON_USEDEP}]
-			dev-python/numpy[${PYTHON_USEDEP}]
-			dev-python/pygments[${PYTHON_USEDEP}]
-			dev-python/sip[${PYTHON_USEDEP}]
-			dev-python/six[${PYTHON_USEDEP}]
-			dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/zope-interface[${PYTHON_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/PyQt5[opengl,${PYTHON_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2-only]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2-only]
-		dev-qt/qtsql:5
-		dev-qt/qtsvg:5
-		dev-qt/qttest:5
-		dev-qt/qtx11extras:5
-		dev-qt/qtxmlpatterns:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tk? ( dev-lang/tk:0= )
-	webengine? ( dev-qt/qtwebengine:5[widgets] )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,${PYTHON_USEDEP}]
-		')
-	)
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-	"${FILESDIR}"/${PN}-5.9.0-gcc11-include.patch
-)
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-	use python && python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		Remoting/Application/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-UBUILD_SHARED_LIBS
-		-DPARAVIEW_BUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		# boost
-		-DVTK_MODULE_ENABLE_VTK_IOInfovis="$(usex boost YES NO)"
-
-		# doc
-		-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-		-DVTK_GROUP_ENABLE_MPI="$(usex mpi YES NO)"
-
-		# mysql
-		-DVTK_MODULE_ENABLE_VTK_IOMySQL="$(usex mysql YES NO)"
-
-		# offscreen
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-
-		# plugins
-		-DPARAVIEW_PLUGINS_DEFAULT="$(usex plugins)"
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DPARAVIEW_USE_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_USE_QT="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-		-DVTK_GROUP_ENABLE_Qt="$(usex qt5 YES NO)"
-
-		# sqlite
-		-DVTK_MODULE_ENABLE_VTK_sqlite="$(usex sqlite YES NO)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_USE_TK="$(usex tk)"
-		-DVTK_GROUP_ENABLE_Tk="$(usex tk YES NO)"
-
-		# webengine
-		-DPARAVIEW_USE_QTWEBENGINE="$(usex webengine)"
-		-DVTK_GROUP_ENABLE_Web="$(usex webengine YES NO)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
-		)
-	fi
-
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Clients/ParaView/pvIcon-96x96.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	xdg_icon_cache_update
-}
-
-pkg_postrm() {
-	xdg_icon_cache_update
-}

diff --git a/sci-visualization/paraview/paraview-5.9.1.ebuild b/sci-visualization/paraview/paraview-5.9.1.ebuild
deleted file mode 100644
index f3ceac1728a1..000000000000
--- a/sci-visualization/paraview/paraview-5.9.1.ebuild
+++ /dev/null
@@ -1,238 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{8,9} )
-inherit cmake desktop python-single-r1 qmake-utils toolchain-funcs xdg-utils
-
-MAIN_PV=$(ver_cut 0-1)
-MAJOR_PV=$(ver_cut 1-2)
-MY_P="ParaView-v${PV}"
-
-DESCRIPTION="Powerful scientific data visualization application"
-HOMEPAGE="https://www.paraview.org"
-SRC_URI="https://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.xz"
-
-LICENSE="paraview GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="boost cg doc examples ffmpeg mpi mysql nvcontrol openmp offscreen plugins python +qt5 +sqlite test tk +webengine"
-
-RESTRICT="mirror test"
-
-# "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
-REQUIRED_USE="
-	python? ( mpi ${PYTHON_REQUIRED_USE} )
-	mysql? ( sqlite )
-	webengine? ( qt5 )
-	qt5? ( sqlite )
-	?? ( offscreen qt5 )"
-
-# TODO: Verify that these two are not needed any more for the catalyst
-# module:
-#  - dev-python/PyQt5
-#  - dev-qt/qtgui:5[-gles2-only]
-RDEPEND="
-	app-arch/lz4
-	dev-libs/expat
-	dev-libs/jsoncpp:=
-	dev-libs/libxml2:2
-	dev-libs/protobuf:=
-	dev-libs/pugixml
-	media-libs/freetype
-	media-libs/glew:0
-	media-libs/libpng:0
-	media-libs/libtheora
-	media-libs/tiff:0=
-	sci-libs/cgnslib
-	sci-libs/hdf5:=[mpi=]
-	>=sci-libs/netcdf-4.2[hdf5]
-	>=sci-libs/netcdf-cxx-4.2:3
-	sys-libs/zlib
-	virtual/glu
-	virtual/jpeg:0
-	x11-libs/libX11
-	x11-libs/libXext
-	x11-libs/libXmu
-	x11-libs/libXt
-	ffmpeg? ( media-video/ffmpeg )
-	mpi? ( virtual/mpi[cxx,romio] )
-	mysql? ( dev-db/mysql-connector-c )
-	offscreen? ( >=media-libs/mesa-18.3.6[osmesa] )
-	!offscreen? ( virtual/opengl )
-	python? (
-		${PYTHON_DEPS}
-		$(python_gen_cond_dep '
-			dev-python/constantly[${PYTHON_USEDEP}]
-			dev-python/incremental[${PYTHON_USEDEP}]
-			dev-python/matplotlib[${PYTHON_USEDEP}]
-			dev-python/numpy[${PYTHON_USEDEP}]
-			dev-python/pygments[${PYTHON_USEDEP}]
-			dev-python/sip[${PYTHON_USEDEP}]
-			dev-python/six[${PYTHON_USEDEP}]
-			dev-python/twisted[${PYTHON_USEDEP}]
-			dev-python/zope-interface[${PYTHON_USEDEP}]
-			mpi? ( dev-python/mpi4py )
-			qt5? ( dev-python/PyQt5[opengl,${PYTHON_USEDEP}] )
-		')
-	)
-	qt5? (
-		dev-qt/designer:5
-		dev-qt/qtgui:5[-gles2-only]
-		dev-qt/qthelp:5
-		dev-qt/qtopengl:5[-gles2-only]
-		dev-qt/qtsql:5
-		dev-qt/qtsvg:5
-		dev-qt/qttest:5
-		dev-qt/qtx11extras:5
-		dev-qt/qtxmlpatterns:5
-	)
-	sqlite? ( dev-db/sqlite:3 )
-	tk? ( dev-lang/tk:0= )
-	webengine? ( dev-qt/qtwebengine:5[widgets] )"
-DEPEND="${RDEPEND}
-	${PYTHON_DEPS}
-	boost? (
-		$(python_gen_cond_dep '
-			dev-libs/boost[mpi?,${PYTHON_USEDEP}]
-		')
-	)
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
-	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
-	"${FILESDIR}"/${PN}-5.9.0-gcc11-include.patch
-)
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-	use python && python-single-r1_pkg_setup
-	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-src_prepare() {
-	# Bug #661812
-	mkdir -p Plugins/StreamLinesRepresentation/doc || die
-
-	cmake_src_prepare
-
-	# lib64 fixes
-	sed -i \
-		-e "s:/lib/python:/$(get_libdir)/python:g" \
-		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
-	sed -i \
-		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
-		Remoting/Application/vtkInitializationHelper.cxx || die
-}
-
-src_configure() {
-	local mycmakeargs=(
-		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
-		-UBUILD_SHARED_LIBS
-		-DPARAVIEW_BUILD_SHARED_LIBS=ON
-		-DCMAKE_VERBOSE_MAKEFILE=ON
-
-		# boost
-		-DVTK_MODULE_ENABLE_VTK_IOInfovis="$(usex boost YES NO)"
-
-		# doc
-		-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION="$(usex doc)"
-
-		# examples
-		-DBUILD_EXAMPLES="$(usex examples)"
-
-		# ffmpeg
-		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
-		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
-
-		# mpi
-		-DPARAVIEW_USE_MPI="$(usex mpi)"
-		-DXDMF_BUILD_MPI="$(usex mpi)"
-		-DVTK_GROUP_ENABLE_MPI="$(usex mpi YES NO)"
-
-		# mysql
-		-DVTK_MODULE_ENABLE_VTK_IOMySQL="$(usex mysql YES NO)"
-
-		# offscreen
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-		-DVTK_OPENGL_HAS_OSMESA="$(usex offscreen)"
-
-		# plugins
-		-DPARAVIEW_PLUGINS_DEFAULT="$(usex plugins)"
-
-		# python
-		-DModule_pqPython="$(usex python)"
-		-DPARAVIEW_USE_PYTHON="$(usex python)"
-
-		# qt5
-		-DPARAVIEW_USE_QT="$(usex qt5)"
-		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
-		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
-		-DVTK_GROUP_ENABLE_Qt="$(usex qt5 YES NO)"
-
-		# sqlite
-		-DVTK_MODULE_ENABLE_VTK_sqlite="$(usex sqlite YES NO)"
-
-		# test
-		-DBUILD_TESTING="$(usex test)"
-
-		# tk
-		-DVTK_USE_TK="$(usex tk)"
-		-DVTK_GROUP_ENABLE_Tk="$(usex tk YES NO)"
-
-		# webengine
-		-DPARAVIEW_USE_QTWEBENGINE="$(usex webengine)"
-		-DVTK_GROUP_ENABLE_Web="$(usex webengine YES NO)"
-	)
-
-	if use openmp; then
-		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
-	fi
-
-	if use qt5; then
-		mycmakeargs+=(
-			-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
-			-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
-			-DQT_MOC_EXECUTABLE="$(qt5_get_bindir)/moc"
-			-Dqt_xmlpatterns_executable="$(qt5_get_bindir)/xmlpatterns"
-		)
-	fi
-
-	cmake_src_configure
-}
-
-src_install() {
-	cmake_src_install
-
-	# remove wrapper binaries and put the actual executable in place
-	for i in {paraview-config,pvserver,pvdataserver,pvrenderserver,pvbatch,pvpython,paraview}; do
-		if [ -f "${ED}"/usr/lib/"$i" ]; then
-			mv "${ED}"/usr/lib/"$i" "${ED}"/usr/bin/"$i" || die
-		fi
-	done
-
-	# set up the environment
-	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
-	doenvd "${T}"/40${PN}
-
-	newicon "${S}"/Clients/ParaView/pvIcon-96x96.png paraview.png
-	make_desktop_entry paraview "Paraview" paraview
-
-	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
-}
-
-pkg_postinst() {
-	xdg_icon_cache_update
-}
-
-pkg_postrm() {
-	xdg_icon_cache_update
-}


^ permalink raw reply related	[flat|nested] 15+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-visualization/paraview/files/, sci-visualization/paraview/
@ 2024-01-08 23:31 Matthias Maier
  0 siblings, 0 replies; 15+ messages in thread
From: Matthias Maier @ 2024-01-08 23:31 UTC (permalink / raw
  To: gentoo-commits

commit:     43ac4e061e2033642bd8c137e0a5753ea6070b53
Author:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Mon Jan  8 22:48:01 2024 +0000
Commit:     Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Mon Jan  8 23:31:50 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=43ac4e06

sci-visualization/paraview: fix compilation

Thanks to Attila Tóth for the patch

Closes: https://bugs.gentoo.org/910541
Signed-off-by: Matthias Maier <tamiko <AT> gentoo.org>

 .../paraview/files/paraview-5.11.1-missing-include.patch      | 11 +++++++++++
 sci-visualization/paraview/paraview-5.11.1.ebuild             |  3 ++-
 2 files changed, 13 insertions(+), 1 deletion(-)

diff --git a/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch b/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch
new file mode 100644
index 000000000000..d59d78412750
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.11.1-missing-include.patch
@@ -0,0 +1,11 @@
+diff -urNp ParaView-v5.11.1-orig/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp ParaView-v5.11.1-dwok/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp
+--- ParaView-v5.11.1-orig/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp	2023-03-30 16:08:08.000000000 +0200
++++ ParaView-v5.11.1-dwok/VTK/ThirdParty/libproj/vtklibproj/src/proj_json_streaming_writer.hpp	2023-08-26 14:53:20.211944383 +0200
+@@ -33,6 +33,7 @@
+ 
+ #include <vector>
+ #include <string>
++#include <cstdint>
+ 
+ #define CPL_DLL
+ 

diff --git a/sci-visualization/paraview/paraview-5.11.1.ebuild b/sci-visualization/paraview/paraview-5.11.1.ebuild
index 5816780dbe50..b1415ed7b27c 100644
--- a/sci-visualization/paraview/paraview-5.11.1.ebuild
+++ b/sci-visualization/paraview/paraview-5.11.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
@@ -104,6 +104,7 @@ BDEPEND="
 
 PATCHES=(
 	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+	"${FILESDIR}"/${P}-missing-include.patch
 )
 
 pkg_pretend() {


^ permalink raw reply related	[flat|nested] 15+ messages in thread

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