[gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/

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* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2013-11-11 21:48 Nicolas Bock
  0 siblings, 0 replies; 31+ messages in thread
From: Nicolas Bock @ 2013-11-11 21:48 UTC (permalink / raw
  To: gentoo-commits

commit:     6d34e48349d67abccf3a90600cbf58aec0d1504e
Author:     Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Sun Nov 10 22:22:57 2013 +0000
Commit:     Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Sun Nov 10 22:22:57 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=6d34e483

ENH: nibabel stable ebuild

---
 sci-libs/nibabel/{nibabel-9999.ebuild => nibabel-1.3.0.ebuild} | 4 ++--
 sci-libs/nibabel/nibabel-9999.ebuild                           | 2 ++
 2 files changed, 4 insertions(+), 2 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
similarity index 90%
copy from sci-libs/nibabel/nibabel-9999.ebuild
copy to sci-libs/nibabel/nibabel-1.3.0.ebuild
index 0070d0b..39bcc91 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-1.3.0.ebuild
@@ -6,11 +6,11 @@ EAPI="5"
 
 PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
 
-inherit distutils-r1 git-2
+inherit distutils-r1
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
-EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.zip"
 
 LICENSE="MIT"
 SLOT="0"

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 0070d0b..a2c3555 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -12,6 +12,8 @@ DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
 EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 
+KEYWORDS="~amd64 ~x86"
+
 LICENSE="MIT"
 SLOT="0"
 IUSE="dicom doc test"


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2013-11-11 21:48 Nicolas Bock
  0 siblings, 0 replies; 31+ messages in thread
From: Nicolas Bock @ 2013-11-11 21:48 UTC (permalink / raw
  To: gentoo-commits

commit:     6593454ea25f652fec5ecc5363d084c7c7f3f2f8
Author:     Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Sun Nov 10 23:29:54 2013 +0000
Commit:     Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Sun Nov 10 23:29:54 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=6593454e

fix keywords messup

---
 sci-libs/nibabel/nibabel-1.3.0.ebuild | 2 ++
 sci-libs/nibabel/nibabel-9999.ebuild  | 2 --
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-1.3.0.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
index 39bcc91..51eec2f 100644
--- a/sci-libs/nibabel/nibabel-1.3.0.ebuild
+++ b/sci-libs/nibabel/nibabel-1.3.0.ebuild
@@ -12,6 +12,8 @@ DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.zip"
 
+KEYWORDS="~amd64 ~x86"
+
 LICENSE="MIT"
 SLOT="0"
 IUSE="dicom doc test"

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index a2c3555..0070d0b 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -12,8 +12,6 @@ DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
 EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 
-KEYWORDS="~amd64 ~x86"
-
 LICENSE="MIT"
 SLOT="0"
 IUSE="dicom doc test"


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2014-01-06 18:33 Justin Lecher
  0 siblings, 0 replies; 31+ messages in thread
From: Justin Lecher @ 2014-01-06 18:33 UTC (permalink / raw
  To: gentoo-commits

commit:     3f7323688e8ba8919cef97a1643ec49e56d359a5
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Jan  6 18:26:35 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Jan  6 18:26:35 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3f732368

sci-libs/nibabel: Switch from git-2 to git-r3

Package-Manager: portage-2.2.8

---
 sci-libs/nibabel/ChangeLog            |  8 ++++++++
 sci-libs/nibabel/metadata.xml         | 18 +++++++++---------
 sci-libs/nibabel/nibabel-1.3.0.ebuild |  4 ++--
 sci-libs/nibabel/nibabel-9999.ebuild  |  8 +++++---
 4 files changed, 24 insertions(+), 14 deletions(-)

diff --git a/sci-libs/nibabel/ChangeLog b/sci-libs/nibabel/ChangeLog
new file mode 100644
index 0000000..c31cec7
--- /dev/null
+++ b/sci-libs/nibabel/ChangeLog
@@ -0,0 +1,8 @@
+# ChangeLog for sci-libs/nibabel
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+  06 Jan 2014; Justin Lecher <jlec@gentoo.org> nibabel-1.3.0.ebuild,
+  nibabel-9999.ebuild, metadata.xml:
+  Switch from git-2 to git-r3
+

diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml
index 7ffd788..bb00d12 100644
--- a/sci-libs/nibabel/metadata.xml
+++ b/sci-libs/nibabel/metadata.xml
@@ -1,19 +1,19 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-<herd>sci</herd>
-<maintainer>
-	<email>h.chr@mail.ru</email>
-	<name>Horea Christian</name>
-</maintainer>
-<longdescription lang="en">
+  <herd>sci</herd>
+  <maintainer>
+    <email>h.chr@mail.ru</email>
+    <name>Horea Christian</name>
+  </maintainer>
+  <longdescription lang="en">
 	The package provides read and write access to some common medical and
 	neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,
 	NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer
 	geometry, and read Freesurfer morphometry and annotation files. There is some
 	very limited support for DICOM. NiBabel is the successor of PyNIfTI.
 </longdescription>
-<use>
-	<flag name="dicom">Adds limited read support for the DICOM imaging format.</flag>
-</use>
+  <use>
+    <flag name="dicom">Adds limited read support for the DICOM imaging format.</flag>
+  </use>
 </pkgmetadata>

diff --git a/sci-libs/nibabel/nibabel-1.3.0.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
index 51eec2f..c3d5d27 100644
--- a/sci-libs/nibabel/nibabel-1.3.0.ebuild
+++ b/sci-libs/nibabel/nibabel-1.3.0.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
 EAPI="5"
 
-PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
+PYTHON_COMPAT=( python2_7 )
 
 inherit distutils-r1
 

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 0070d0b..81915fa 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -1,20 +1,22 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
 EAPI="5"
 
-PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
+PYTHON_COMPAT=( python2_7 )
 
-inherit distutils-r1 git-2
+inherit distutils-r1 git-r3
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI=""
 EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 
 LICENSE="MIT"
 SLOT="0"
 IUSE="dicom doc test"
+KEYWORDS=""
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]


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* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2015-06-15  7:24 Justin Lecher
  0 siblings, 0 replies; 31+ messages in thread
From: Justin Lecher @ 2015-06-15  7:24 UTC (permalink / raw
  To: gentoo-commits

commit:     7ff729074e0b2e9a0d9abbd8bd046137347c9525
Author:     Horea Christian <h.chr <AT> mail <DOT> ru>
AuthorDate: Thu Jun 11 22:25:22 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jun 11 22:25:22 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7ff72907

downloading tarball instead of zip

Package-Manager: portage-2.2.20

 sci-libs/nibabel/ChangeLog            | 6 ++++--
 sci-libs/nibabel/nibabel-1.3.0.ebuild | 4 ++--
 2 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/sci-libs/nibabel/ChangeLog b/sci-libs/nibabel/ChangeLog
index c31cec7..237f97e 100644
--- a/sci-libs/nibabel/ChangeLog
+++ b/sci-libs/nibabel/ChangeLog
@@ -1,8 +1,10 @@
 # ChangeLog for sci-libs/nibabel
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  11 Jun 2015; Chymera <chymera@gentoo.org> nibabel-1.3.0.ebuild:
+  now downloading as tarball
+
   06 Jan 2014; Justin Lecher <jlec@gentoo.org> nibabel-1.3.0.ebuild,
   nibabel-9999.ebuild, metadata.xml:
   Switch from git-2 to git-r3
-

diff --git a/sci-libs/nibabel/nibabel-1.3.0.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
index c3d5d27..886434f 100644
--- a/sci-libs/nibabel/nibabel-1.3.0.ebuild
+++ b/sci-libs/nibabel/nibabel-1.3.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -10,7 +10,7 @@ inherit distutils-r1
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.zip"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
 KEYWORDS="~amd64 ~x86"
 


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* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2015-09-01 11:47 Justin Lecher
  0 siblings, 0 replies; 31+ messages in thread
From: Justin Lecher @ 2015-09-01 11:47 UTC (permalink / raw
  To: gentoo-commits

commit:     8b3816cb8ff03dc927608cc5575e4c079eaa3728
Author:     Robbert Harms <robbert <AT> xkls <DOT> nl>
AuthorDate: Sun Aug 30 07:31:32 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Aug 30 07:31:32 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8b3816cb

Version bump, adds nibabel-2.0.1. Also, version-2.0.1 now has python3_4 as python version dependency.

 sci-libs/nibabel/nibabel-2.0.1.ebuild | 42 +++++++++++++++++++++++++++++++++++
 1 file changed, 42 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-2.0.1.ebuild b/sci-libs/nibabel/nibabel-2.0.1.ebuild
new file mode 100644
index 0000000..6d2f25d
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-2.0.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI="5"
+
+PYTHON_COMPAT=( python2_7 python3_4 )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/nose[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom[${PYTHON_USEDEP}]
+		virtual/python-imaging[${PYTHON_USEDEP}]
+		)
+	"
+
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? ( ${RDEPEND} )
+	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+	"
+
+python_test() {
+	distutils-r1_install_for_testing
+	cd "${BUILD_DIR}" || die
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests || die
+}


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* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2016-10-12  6:30 Marius Brehler
  0 siblings, 0 replies; 31+ messages in thread
From: Marius Brehler @ 2016-10-12  6:30 UTC (permalink / raw
  To: gentoo-commits

commit:     d1dff69b7ea31fe9ac6e2e457533b25d4f8e0224
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Wed Sep 28 18:41:27 2016 +0000
Commit:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Wed Sep 28 18:41:27 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=d1dff69b

sci-libs/nibabel: updted test depenencies, python compatibility, EAPI (#687)

Package-Manager: portage-2.3.1

 sci-libs/nibabel/nibabel-1.3.0.ebuild | 11 +++++++----
 sci-libs/nibabel/nibabel-2.0.1.ebuild |  9 ++++++---
 sci-libs/nibabel/nibabel-2.1.0.ebuild |  9 ++++++---
 sci-libs/nibabel/nibabel-9999.ebuild  |  9 ++++++---
 4 files changed, 25 insertions(+), 13 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-1.3.0.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
index 151cca9..a78e458 100644
--- a/sci-libs/nibabel/nibabel-1.3.0.ebuild
+++ b/sci-libs/nibabel/nibabel-1.3.0.ebuild
@@ -2,9 +2,9 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI="6"
+EAPI=6
 
-PYTHON_COMPAT=( python2_7 )
+PYTHON_COMPAT=( python{2_7,3_4} )
 
 inherit distutils-r1
 
@@ -21,7 +21,7 @@ IUSE="dicom doc test"
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
 	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/nose[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
 		sci-libs/pydicom[${PYTHON_USEDEP}]
 		dev-python/pillow[${PYTHON_USEDEP}]
@@ -30,7 +30,10 @@ RDEPEND="
 
 DEPEND="
 	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( ${RDEPEND} )
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
 	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
 	"
 

diff --git a/sci-libs/nibabel/nibabel-2.0.1.ebuild b/sci-libs/nibabel/nibabel-2.0.1.ebuild
index 84e8c98..29d75a7 100644
--- a/sci-libs/nibabel/nibabel-2.0.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.0.1.ebuild
@@ -2,7 +2,7 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI="6"
+EAPI=6
 
 PYTHON_COMPAT=( python{2_7,3_4,3_5} )
 
@@ -21,7 +21,7 @@ IUSE="dicom doc test"
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
 	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/nose[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
 		sci-libs/pydicom[${PYTHON_USEDEP}]
 		dev-python/pillow[${PYTHON_USEDEP}]
@@ -30,7 +30,10 @@ RDEPEND="
 
 DEPEND="
 	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( ${RDEPEND} )
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
 	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
 	"
 

diff --git a/sci-libs/nibabel/nibabel-2.1.0.ebuild b/sci-libs/nibabel/nibabel-2.1.0.ebuild
index 84e8c98..29d75a7 100644
--- a/sci-libs/nibabel/nibabel-2.1.0.ebuild
+++ b/sci-libs/nibabel/nibabel-2.1.0.ebuild
@@ -2,7 +2,7 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI="6"
+EAPI=6
 
 PYTHON_COMPAT=( python{2_7,3_4,3_5} )
 
@@ -21,7 +21,7 @@ IUSE="dicom doc test"
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
 	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/nose[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
 		sci-libs/pydicom[${PYTHON_USEDEP}]
 		dev-python/pillow[${PYTHON_USEDEP}]
@@ -30,7 +30,10 @@ RDEPEND="
 
 DEPEND="
 	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( ${RDEPEND} )
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
 	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
 	"
 

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 7fd8f68..2004479 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -2,7 +2,7 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI="6"
+EAPI=6
 
 PYTHON_COMPAT=( python{2_7,3_4,3_5} )
 
@@ -21,7 +21,7 @@ KEYWORDS=""
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
 	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/nose[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
 		sci-libs/pydicom[${PYTHON_USEDEP}]
 		dev-python/pillow[${PYTHON_USEDEP}]
@@ -30,7 +30,10 @@ RDEPEND="
 
 DEPEND="
 	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( ${RDEPEND} )
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
 	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
 	"
 


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* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2017-08-25  4:04 Benda XU
  0 siblings, 0 replies; 31+ messages in thread
From: Benda XU @ 2017-08-25  4:04 UTC (permalink / raw
  To: gentoo-commits

commit:     bc5aa0fa1a45eae0e39c4f1a5d419d4f931dae64
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Mon Aug 21 16:09:01 2017 +0000
Commit:     Benda XU <heroxbd <AT> gentoo <DOT> org>
CommitDate: Fri Aug 25 04:02:51 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=bc5aa0fa

sci-libs/nibabel: fixed indentation

Package-Manager: Portage-2.3.8, Repoman-2.3.3

 sci-libs/nibabel/metadata.xml | 32 ++++++++++++++++----------------
 1 file changed, 16 insertions(+), 16 deletions(-)

diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml
index be9e6a4cc..f2e7dfe11 100644
--- a/sci-libs/nibabel/metadata.xml
+++ b/sci-libs/nibabel/metadata.xml
@@ -1,25 +1,25 @@
 <?xml version='1.0' encoding='UTF-8'?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-  <maintainer type="person">
-    <email>horea.christ@gmail.com</email>
-    <name>Horea Christian</name>
-  </maintainer>
-  <maintainer type="project">
-    <email>sci@gentoo.org</email>
-    <name>Gentoo Science Project</name>
-  </maintainer>
-  <longdescription lang="en">
+	<maintainer type="person">
+		<email>horea.christ@gmail.com</email>
+		<name>Horea Christian</name>
+	</maintainer>
+	<maintainer type="project">
+		<email>sci@gentoo.org</email>
+		<name>Gentoo Science Project</name>
+	</maintainer>
+	<longdescription lang="en">
 	The package provides read and write access to some common medical and
 	neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,
 	NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer
 	geometry, and read Freesurfer morphometry and annotation files. There is some
 	very limited support for DICOM. NiBabel is the successor of PyNIfTI.
-  </longdescription>
-  <use>
-    <flag name="dicom">Adds limited read support for the DICOM imaging format.</flag>
-  </use>
-  <upstream>
-    <remote-id type="github">nipy/nibabel</remote-id>
-  </upstream>
+	</longdescription>
+	<use>
+		<flag name="dicom">Adds limited read support for the DICOM imaging format.</flag>
+	</use>
+	<upstream>
+		<remote-id type="github">nipy/nibabel</remote-id>
+	</upstream>
 </pkgmetadata>


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2018-07-27 15:42 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2018-07-27 15:42 UTC (permalink / raw
  To: gentoo-commits

commit:     ffcf3f19e5ef9de19fe41eb1ee1e759091c4f8da
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Fri Jul 27 15:42:11 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jul 27 15:42:11 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ffcf3f19

sci-libs/nibabel: EAPI and PYTHON_COMPAT bump

Package-Manager: Portage-2.3.43, Repoman-2.3.10

 sci-libs/nibabel/nibabel-2.1.0.ebuild | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.1.0.ebuild b/sci-libs/nibabel/nibabel-2.1.0.ebuild
index 71dc0fff3..d25151e1a 100644
--- a/sci-libs/nibabel/nibabel-2.1.0.ebuild
+++ b/sci-libs/nibabel/nibabel-2.1.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_4,3_5} )
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
 
 inherit distutils-r1
 


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2018-07-31 14:14 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2018-07-31 14:14 UTC (permalink / raw
  To: gentoo-commits

commit:     3fd203a789a08050fc4801d4c2c4ca9d3f40de24
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Tue Jul 31 14:14:03 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Tue Jul 31 14:14:03 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=3fd203a7

sci-libs/nibabel: version bump

Package-Manager: Portage-2.3.44, Repoman-2.3.10

 sci-libs/nibabel/nibabel-2.3.0.ebuild | 44 +++++++++++++++++++++++++++++++++++
 1 file changed, 44 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-2.3.0.ebuild b/sci-libs/nibabel/nibabel-2.3.0.ebuild
new file mode 100644
index 000000000..d25151e1a
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-2.3.0.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom[${PYTHON_USEDEP}]
+		dev-python/pillow[${PYTHON_USEDEP}]
+		)
+	"
+
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
+	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+	"
+
+python_test() {
+	distutils-r1_install_for_testing
+	cd "${BUILD_DIR}" || die
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests || die
+}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2018-12-31  3:51 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2018-12-31  3:51 UTC (permalink / raw
  To: gentoo-commits

commit:     ff908446fc453f2bf2746ec68fea85f4d4ba69c9
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Mon Dec 31 03:51:35 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Dec 31 03:51:35 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ff908446

sci-libs/nibabel: removed deprecated version

Signed-off-by: Horea Christian <horea.christ <AT> yandex.com>
Package-Manager: Portage-2.3.52, Repoman-2.3.12

 sci-libs/nibabel/nibabel-1.3.0.ebuild | 44 -----------------------------------
 1 file changed, 44 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-1.3.0.ebuild b/sci-libs/nibabel/nibabel-1.3.0.ebuild
deleted file mode 100644
index 836f2e65a..000000000
--- a/sci-libs/nibabel/nibabel-1.3.0.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-KEYWORDS="~amd64 ~x86"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE="dicom doc test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-	"
-
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
-
-python_test() {
-	distutils-r1_install_for_testing
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2018-12-31  5:43 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2018-12-31  5:43 UTC (permalink / raw
  To: gentoo-commits

commit:     6ae04d24faeac75edfa0a900fe193269c32890ff
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Mon Dec 31 05:40:17 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Dec 31 05:40:17 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6ae04d24

sci-libs/nibabel: version bump

Signed-off-by: Horea Christian <horea.christ <AT> yandex.com>
Package-Manager: Portage-2.3.52, Repoman-2.3.12

 sci-libs/nibabel/nibabel-2.3.1.ebuild | 43 +++++++++++++++++++++++++++++++++++
 1 file changed, 43 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-2.3.1.ebuild b/sci-libs/nibabel/nibabel-2.3.1.ebuild
new file mode 100644
index 000000000..4018c7f41
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-2.3.1.ebuild
@@ -0,0 +1,43 @@
+# Copyright 1999-2018 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom[${PYTHON_USEDEP}]
+		dev-python/pillow[${PYTHON_USEDEP}]
+		)
+	"
+
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
+	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+	"
+
+python_test() {
+	cd "${BUILD_DIR}" || die
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests || die
+}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2018-12-31  8:06 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2018-12-31  8:06 UTC (permalink / raw
  To: gentoo-commits

commit:     4d0643b56a624b1cbd9c8bebdca0132798ad839f
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Mon Dec 31 08:05:31 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Dec 31 08:05:31 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4d0643b5

sci-libs/nibabel: PYTHON_COMPAT and EAPI bump

Package-Manager: Portage-2.3.52, Repoman-2.3.12
Signed-off-by: Horea Christian <horea.christ <AT> yandex.com>

 sci-libs/nibabel/nibabel-9999.ebuild | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 1fe4bf5a5..ab88031a7 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_4,3_5} )
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
 
 inherit distutils-r1 git-r3
 


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2019-11-10 12:20 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2019-11-10 12:20 UTC (permalink / raw
  To: gentoo-commits

commit:     9fb36b6a13413ad351f954bc1733351af4d64b79
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Nov 10 12:20:25 2019 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Nov 10 12:20:25 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=9fb36b6a

sci-libs/nibabel: version bump 2.5.1

with added test suite support

Package-Manager: Portage-2.3.78, Repoman-2.3.17
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/metadata.xml         | 12 +++++-----
 sci-libs/nibabel/nibabel-2.5.1.ebuild | 42 +++++++++++++++++++++++++++++++++++
 2 files changed, 48 insertions(+), 6 deletions(-)

diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml
index 59e566e2d..66f8b64ec 100644
--- a/sci-libs/nibabel/metadata.xml
+++ b/sci-libs/nibabel/metadata.xml
@@ -10,12 +10,12 @@
 		<name>Gentoo Science Project</name>
 	</maintainer>
 	<longdescription lang="en">
-The package provides read and write access to some common medical and
-neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,
-NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer
-geometry, and read Freesurfer morphometry and annotation files. There is some
-very limited support for DICOM. NiBabel is the successor of PyNIfTI.
-</longdescription>
+		The package provides read and write access to some common medical and
+		neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,
+		NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer
+		geometry, and read Freesurfer morphometry and annotation files. There is some
+		very limited support for DICOM. NiBabel is the successor of PyNIfTI.
+	</longdescription>
 	<use>
 		<flag name="dicom">Adds limited read support for the DICOM imaging format.</flag>
 	</use>

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
new file mode 100644
index 000000000..a76565117
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom[${PYTHON_USEDEP}]
+		dev-python/pillow[${PYTHON_USEDEP}]
+		)
+"
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
+	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+"
+
+python_test() {
+	cd "${BUILD_DIR}" || die
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests || die
+}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2020-01-08 21:49 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2020-01-08 21:49 UTC (permalink / raw
  To: gentoo-commits

commit:     168117d6f6d36f74ef5a9311cb7f7af58ef60ea1
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Wed Jan  8 21:48:05 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Wed Jan  8 21:48:05 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=168117d6

sci-libs/nibabel: deprecated versions and PYTHON_COMPAT

Package-Manager: Portage-2.3.84, Repoman-2.3.20
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.0.1.ebuild | 44 -----------------------------------
 sci-libs/nibabel/nibabel-2.1.0.ebuild | 44 -----------------------------------
 sci-libs/nibabel/nibabel-2.5.1.ebuild |  4 ++--
 3 files changed, 2 insertions(+), 90 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.0.1.ebuild b/sci-libs/nibabel/nibabel-2.0.1.ebuild
deleted file mode 100644
index 71dc0fff3..000000000
--- a/sci-libs/nibabel/nibabel-2.0.1.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4,3_5} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-KEYWORDS="~amd64 ~x86"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE="dicom doc test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-	"
-
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
-
-python_test() {
-	distutils-r1_install_for_testing
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}

diff --git a/sci-libs/nibabel/nibabel-2.1.0.ebuild b/sci-libs/nibabel/nibabel-2.1.0.ebuild
deleted file mode 100644
index d25151e1a..000000000
--- a/sci-libs/nibabel/nibabel-2.1.0.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-KEYWORDS="~amd64 ~x86"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE="dicom doc test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	sci-libs/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-	"
-
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
-
-python_test() {
-	distutils-r1_install_for_testing
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index a76565117..1b8aa9084 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+PYTHON_COMPAT=( python3_6 )
 
 inherit distutils-r1
 


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2020-03-13 17:50 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2020-03-13 17:50 UTC (permalink / raw
  To: gentoo-commits

commit:     5199050855472db48e12b9669c4075560bf0f63a
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Mar 13 17:50:00 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Mar 13 17:50:00 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=51990508

sci-libs/nibabel: version bump 3.0.2

Package-Manager: Portage-2.3.92, Repoman-2.3.20
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-3.0.2.ebuild | 42 +++++++++++++++++++++++++++++++++++
 1 file changed, 42 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
new file mode 100644
index 000000000..e64e4e48b
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_6 python3_7 )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom[${PYTHON_USEDEP}]
+		dev-python/pillow[${PYTHON_USEDEP}]
+		)
+"
+DEPEND="
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
+	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+"
+
+python_test() {
+	cd "${BUILD_DIR}" || die
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests || die
+}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2020-09-25  9:17 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2020-09-25  9:17 UTC (permalink / raw
  To: gentoo-commits

commit:     88d61613b6f11b6a0b4faa5de1554b4743e7dade
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Sep 25 09:17:13 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Sep 25 09:17:13 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=88d61613

sci-libs/nibabel: removed old version, PYTHON_COMPAT update

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.3.0.ebuild | 44 -----------------------------------
 sci-libs/nibabel/nibabel-2.3.1.ebuild |  6 ++---
 sci-libs/nibabel/nibabel-2.5.1.ebuild |  4 ++--
 sci-libs/nibabel/nibabel-3.0.2.ebuild |  4 ++--
 sci-libs/nibabel/nibabel-9999.ebuild  |  6 ++---
 5 files changed, 10 insertions(+), 54 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.3.0.ebuild b/sci-libs/nibabel/nibabel-2.3.0.ebuild
deleted file mode 100644
index acd9fed6c..000000000
--- a/sci-libs/nibabel/nibabel-2.3.0.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-KEYWORDS="~amd64 ~x86"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE="dicom doc test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-	"
-
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
-
-python_test() {
-	distutils-r1_install_for_testing
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}

diff --git a/sci-libs/nibabel/nibabel-2.3.1.ebuild b/sci-libs/nibabel/nibabel-2.3.1.ebuild
index 4503f2519..1b571d4b0 100644
--- a/sci-libs/nibabel/nibabel-2.3.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.3.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Authors
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+PYTHON_COMPAT=( python3_{6,7,8} )
 
 inherit distutils-r1
 
@@ -22,7 +22,7 @@ RDEPEND="
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
+		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
 	"

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index 63935404a..e377513f2 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_6 )
+PYTHON_COMPAT=( python3_{6,7,8} )
 
 inherit distutils-r1
 
@@ -22,7 +22,7 @@ RDEPEND="
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
+		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
 "

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
index a49cca239..e377513f2 100644
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_6 python3_7 )
+PYTHON_COMPAT=( python3_{6,7,8} )
 
 inherit distutils-r1
 
@@ -22,7 +22,7 @@ RDEPEND="
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
+		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
 "

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 68f9e1a3f..8c4e25842 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Authors
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+PYTHON_COMPAT=( python3_{6,7,8} )
 
 inherit distutils-r1 git-r3
 
@@ -22,7 +22,7 @@ RDEPEND="
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
-		sci-libs/pydicom[${PYTHON_USEDEP}]
+		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
 	"


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2020-09-27  3:26 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2020-09-27  3:26 UTC (permalink / raw
  To: gentoo-commits

commit:     4efd7d1c7665e0e3370005e1016311952a5d4460
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 27 03:26:29 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 27 03:26:29 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4efd7d1c

sci-libs/nibabel: removed old version, PYTHON_COMPAT update

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.3.1.ebuild | 43 -----------------------------------
 sci-libs/nibabel/nibabel-2.5.1.ebuild |  5 ++--
 sci-libs/nibabel/nibabel-3.0.2.ebuild |  5 ++--
 sci-libs/nibabel/nibabel-9999.ebuild  | 10 ++++----
 4 files changed, 8 insertions(+), 55 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.3.1.ebuild b/sci-libs/nibabel/nibabel-2.3.1.ebuild
deleted file mode 100644
index 1b571d4b0..000000000
--- a/sci-libs/nibabel/nibabel-2.3.1.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{6,7,8} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-KEYWORDS="~amd64 ~x86"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE="dicom doc test"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-	"
-
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
-
-python_test() {
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index e377513f2..c3143ae9c 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{6,7,8} )
+PYTHON_COMPAT=( python3_{6..9} )
 
 inherit distutils-r1
 
@@ -11,10 +11,9 @@ DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
-KEYWORDS="~amd64 ~x86"
-
 LICENSE="MIT"
 SLOT="0"
+KEYWORDS="~amd64 ~x86"
 IUSE="dicom doc test"
 
 RDEPEND="

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
index e377513f2..c3143ae9c 100644
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{6,7,8} )
+PYTHON_COMPAT=( python3_{6..9} )
 
 inherit distutils-r1
 
@@ -11,10 +11,9 @@ DESCRIPTION="Access a cacophony of neuro-imaging file formats"
 HOMEPAGE="http://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
-KEYWORDS="~amd64 ~x86"
-
 LICENSE="MIT"
 SLOT="0"
+KEYWORDS="~amd64 ~x86"
 IUSE="dicom doc test"
 
 RDEPEND="

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 8c4e25842..cd12b33de 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{6,7,8} )
+PYTHON_COMPAT=( python3_{6..9} )
 
 inherit distutils-r1 git-r3
 
@@ -14,8 +14,8 @@ EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 
 LICENSE="MIT"
 SLOT="0"
-IUSE="dicom doc test"
 KEYWORDS=""
+IUSE="dicom doc test"
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
@@ -25,8 +25,7 @@ RDEPEND="
 		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
-	"
-
+"
 DEPEND="
 	dev-python/setuptools[${PYTHON_USEDEP}]
 	test? (
@@ -34,10 +33,9 @@ DEPEND="
 		dev-python/nose[${PYTHON_USEDEP}]
 		)
 	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-	"
+"
 
 python_test() {
-	distutils-r1_install_for_testing
 	cd "${BUILD_DIR}" || die
 	echo "backend: Agg" > matplotlibrc
 	MPLCONFIGDIR=. nosetests || die


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2020-12-24 11:06 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2020-12-24 11:06 UTC (permalink / raw
  To: gentoo-commits

commit:     cf4e0a8c9a6498ae197c210128849b506b846be8
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Thu Dec 24 11:05:04 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Thu Dec 24 11:05:04 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=cf4e0a8c

sci-libs/nibabel: conditional test restriction

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.5.1.ebuild | 1 +
 sci-libs/nibabel/nibabel-3.0.2.ebuild | 1 +
 sci-libs/nibabel/nibabel-9999.ebuild  | 1 +
 3 files changed, 3 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index c3143ae9c..a336af17b 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -15,6 +15,7 @@ LICENSE="MIT"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="dicom doc test"
+RESTRICT="!test? ( test )"
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
index c3143ae9c..a336af17b 100644
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -15,6 +15,7 @@ LICENSE="MIT"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="dicom doc test"
+RESTRICT="!test? ( test )"
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index cd12b33de..1fa595d11 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -16,6 +16,7 @@ LICENSE="MIT"
 SLOT="0"
 KEYWORDS=""
 IUSE="dicom doc test"
+RESTRICT="!test? ( test )"
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2021-01-06 10:38 Andrew Ammerlaan
  0 siblings, 0 replies; 31+ messages in thread
From: Andrew Ammerlaan @ 2021-01-06 10:38 UTC (permalink / raw
  To: gentoo-commits

commit:     ab5fb3e71f8ff3a9d9166077b42e509c7e4c8239
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Wed Jan  6 10:37:02 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Wed Jan  6 10:37:47 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ab5fb3e7

sci-libs/nibabel: version bump, fix doc building

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-libs/nibabel/nibabel-3.2.1.ebuild | 36 +++++++++++++++++++++++++++++++++++
 sci-libs/nibabel/nibabel-9999.ebuild  | 28 +++++++++++----------------
 2 files changed, 47 insertions(+), 17 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-3.2.1.ebuild b/sci-libs/nibabel/nibabel-3.2.1.ebuild
new file mode 100644
index 000000000..03a5f5b48
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-3.2.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7..9} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="dicom"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
+	dev-python/scipy[${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dicom? (
+		sci-libs/pydicom
+		dev-python/pillow[${PYTHON_USEDEP}]
+		)
+"
+
+BDEPEND="test? (
+	dev-python/pytest-doctestplus[${PYTHON_USEDEP}]
+)"
+
+distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
+distutils_enable_tests pytest

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 1fa595d11..611202ad7 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -1,9 +1,10 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{6..9} )
+PYTHON_COMPAT=( python3_{7..9} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
 
 inherit distutils-r1 git-r3
 
@@ -15,11 +16,11 @@ EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 LICENSE="MIT"
 SLOT="0"
 KEYWORDS=""
-IUSE="dicom doc test"
-RESTRICT="!test? ( test )"
+IUSE="dicom"
 
 RDEPEND="
 	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
@@ -27,17 +28,10 @@ RDEPEND="
 		dev-python/pillow[${PYTHON_USEDEP}]
 		)
 "
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-"
 
-python_test() {
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}
+BDEPEND="test? (
+	dev-python/pytest-doctestplus[${PYTHON_USEDEP}]
+)"
+
+distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
+distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2021-01-13 21:06 Andrew Ammerlaan
  0 siblings, 0 replies; 31+ messages in thread
From: Andrew Ammerlaan @ 2021-01-13 21:06 UTC (permalink / raw
  To: gentoo-commits

commit:     0e52f965c2be19ae962f7c7e3f979d3eb0447472
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Wed Jan 13 21:02:30 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Wed Jan 13 21:02:30 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=0e52f965

sci-libs/nibabel: use https for homepage

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-libs/nibabel/nibabel-2.5.1.ebuild | 4 ++--
 sci-libs/nibabel/nibabel-3.0.2.ebuild | 4 ++--
 sci-libs/nibabel/nibabel-3.2.1.ebuild | 2 +-
 sci-libs/nibabel/nibabel-9999.ebuild  | 2 +-
 4 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index a336af17b..ebec34f95 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python3_{6..9} )
 inherit distutils-r1
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
+HOMEPAGE="https://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
 LICENSE="MIT"

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
index a336af17b..ebec34f95 100644
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python3_{6..9} )
 inherit distutils-r1
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
+HOMEPAGE="https://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
 LICENSE="MIT"

diff --git a/sci-libs/nibabel/nibabel-3.2.1.ebuild b/sci-libs/nibabel/nibabel-3.2.1.ebuild
index 03a5f5b48..d469867f9 100644
--- a/sci-libs/nibabel/nibabel-3.2.1.ebuild
+++ b/sci-libs/nibabel/nibabel-3.2.1.ebuild
@@ -9,7 +9,7 @@ DISTUTILS_USE_SETUPTOOLS=rdepend
 inherit distutils-r1
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
+HOMEPAGE="https://nipy.org/nibabel/"
 SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
 
 LICENSE="MIT"

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
index 611202ad7..283ad8804 100644
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ b/sci-libs/nibabel/nibabel-9999.ebuild
@@ -9,7 +9,7 @@ DISTUTILS_USE_SETUPTOOLS=rdepend
 inherit distutils-r1 git-r3
 
 DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="http://nipy.org/nibabel/"
+HOMEPAGE="https://nipy.org/nibabel/"
 SRC_URI=""
 EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
 


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2022-07-07  4:54 Sam James
  0 siblings, 0 replies; 31+ messages in thread
From: Sam James @ 2022-07-07  4:54 UTC (permalink / raw
  To: gentoo-commits

commit:     e3383c8190097c6975adf18209345121ffbaa8e1
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  7 04:03:37 2022 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Thu Jul  7 04:54:09 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=e3383c81

sci-libs/nibabel: enable py3.10 and disable py3.7

See https://projects.gentoo.org/python/guide/distutils.html#running-tests-with-virtualx re virtx.

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-libs/nibabel/nibabel-3.2.1.ebuild | 11 ++++++++---
 1 file changed, 8 insertions(+), 3 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-3.2.1.ebuild b/sci-libs/nibabel/nibabel-3.2.1.ebuild
index d469867f9..43720d35f 100644
--- a/sci-libs/nibabel/nibabel-3.2.1.ebuild
+++ b/sci-libs/nibabel/nibabel-3.2.1.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{8..10} )
 DISTUTILS_USE_SETUPTOOLS=rdepend
 
 inherit distutils-r1
@@ -23,14 +23,19 @@ RDEPEND="
 	dev-python/scipy[${PYTHON_USEDEP}]
 	dev-python/mock[${PYTHON_USEDEP}]
 	dicom? (
-		sci-libs/pydicom
 		dev-python/pillow[${PYTHON_USEDEP}]
-		)
+		sci-libs/pydicom
+	)
 "
 
 BDEPEND="test? (
 	dev-python/pytest-doctestplus[${PYTHON_USEDEP}]
 )"
 
+EPYTEST_DESELECT=(
+	# Re-evaluate after 3.2.1
+	nibabel/gifti/tests/test_parse_gifti_fast.py::test_parse_dataarrays
+)
+
 distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
 distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2022-07-11 12:24 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2022-07-11 12:24 UTC (permalink / raw
  To: gentoo-commits

commit:     1f98a37e19cfca2905852b935e0512f36f2bd6e1
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jul 11 12:24:43 2022 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jul 11 12:24:43 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1f98a37e

sci-libs/nibabel: dropped version with missing sources

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.5.1.ebuild | 42 -----------------------------------
 1 file changed, 42 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
deleted file mode 100644
index f0759b51a..000000000
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{8..10} )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="https://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="dicom doc test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-"
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-"
-
-python_test() {
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2022-07-11 12:24 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2022-07-11 12:24 UTC (permalink / raw
  To: gentoo-commits

commit:     aac4cf4653bafefa5dad18421fbdb2867d3fb6de
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jul 11 12:24:04 2022 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jul 11 12:24:04 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=aac4cf46

sci-libs/nibabel: EAPI and PYTHON_COMPAT bump

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-2.5.1.ebuild | 6 +++---
 sci-libs/nibabel/nibabel-3.0.2.ebuild | 6 +++---
 sci-libs/nibabel/nibabel-3.2.1.ebuild | 4 ++--
 3 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild b/sci-libs/nibabel/nibabel-2.5.1.ebuild
index 3316b84d5..f0759b51a 100644
--- a/sci-libs/nibabel/nibabel-2.5.1.ebuild
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{8..10} )
 
 inherit distutils-r1
 

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
index 3316b84d5..f0759b51a 100644
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ b/sci-libs/nibabel/nibabel-3.0.2.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{8..10} )
 
 inherit distutils-r1
 

diff --git a/sci-libs/nibabel/nibabel-3.2.1.ebuild b/sci-libs/nibabel/nibabel-3.2.1.ebuild
index 43720d35f..c3b45a93b 100644
--- a/sci-libs/nibabel/nibabel-3.2.1.ebuild
+++ b/sci-libs/nibabel/nibabel-3.2.1.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
 PYTHON_COMPAT=( python3_{8..10} )
 DISTUTILS_USE_SETUPTOOLS=rdepend


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2022-07-11 13:40 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2022-07-11 13:40 UTC (permalink / raw
  To: gentoo-commits

commit:     2fce576bdc2488b408510f1dc2fcb13303ea7f4b
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jul 11 13:40:20 2022 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jul 11 13:40:20 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=2fce576b

sci-libs/nibabel: dropped deprecated live ebuild

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-9999.ebuild | 37 ------------------------------------
 1 file changed, 37 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-9999.ebuild b/sci-libs/nibabel/nibabel-9999.ebuild
deleted file mode 100644
index 283ad8804..000000000
--- a/sci-libs/nibabel/nibabel-9999.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7..9} )
-DISTUTILS_USE_SETUPTOOLS=rdepend
-
-inherit distutils-r1 git-r3
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="https://nipy.org/nibabel/"
-SRC_URI=""
-EGIT_REPO_URI="https://github.com/nipy/nibabel.git"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS=""
-IUSE="dicom"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/packaging[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-"
-
-BDEPEND="test? (
-	dev-python/pytest-doctestplus[${PYTHON_USEDEP}]
-)"
-
-distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
-distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-01-12 12:18 Andrew Ammerlaan
  0 siblings, 0 replies; 31+ messages in thread
From: Andrew Ammerlaan @ 2023-01-12 12:18 UTC (permalink / raw
  To: gentoo-commits

commit:     fe7a9e59b0096a5b06040a82bd97c63969b94cb7
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 12 12:11:54 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Thu Jan 12 12:11:54 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=fe7a9e59

sci-libs/nibabel: drop 3.0.2

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-libs/nibabel/nibabel-3.0.2.ebuild | 42 -----------------------------------
 1 file changed, 42 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-3.0.2.ebuild b/sci-libs/nibabel/nibabel-3.0.2.ebuild
deleted file mode 100644
index 6c2cff127..000000000
--- a/sci-libs/nibabel/nibabel-3.0.2.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_10 )
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="https://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="dicom doc test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		sci-libs/pydicom
-		dev-python/pillow[${PYTHON_USEDEP}]
-		)
-"
-DEPEND="
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? (
-		${RDEPEND}
-		dev-python/nose[${PYTHON_USEDEP}]
-		)
-	doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
-"
-
-python_test() {
-	cd "${BUILD_DIR}" || die
-	echo "backend: Agg" > matplotlibrc
-	MPLCONFIGDIR=. nosetests || die
-}


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-01-30 10:26 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-01-30 10:26 UTC (permalink / raw
  To: gentoo-commits

commit:     933f19809917bf0e4b66f7f703c1ee8e546a7b11
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jan 30 10:14:31 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jan 30 10:14:31 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=933f1980

sci-libs/nibabel: version bump 4.0.0

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-4.0.0.ebuild | 37 +++++++++++++++++++++++++++++++++++
 1 file changed, 37 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-4.0.0.ebuild b/sci-libs/nibabel/nibabel-4.0.0.ebuild
new file mode 100644
index 000000000..2de1e6dc9
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-4.0.0.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_10 )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="https://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="dicom"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
+	dev-python/scipy[${PYTHON_USEDEP}]
+	dicom? (
+		dev-python/pillow[${PYTHON_USEDEP}]
+		sci-libs/pydicom
+	)
+"
+
+EPYTEST_DESELECT=(
+	# Rported upstream:
+	# https://github.com/nipy/nibabel/issues/1191
+	nibabel/tests/test_volumeutils.py::test_a2f_nan2zero_range
+)
+
+distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
+distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-01-30 10:27 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-01-30 10:27 UTC (permalink / raw
  To: gentoo-commits

commit:     72bd1a64770f38360ebfb9a96e0f47cfe857778c
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jan 30 10:27:03 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jan 30 10:27:03 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=72bd1a64

sci-libs/nibabel: version bump 5.0.0

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-5.0.0.ebuild | 35 +++++++++++++++++++++++++++++++++++
 1 file changed, 35 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-5.0.0.ebuild b/sci-libs/nibabel/nibabel-5.0.0.ebuild
new file mode 100644
index 000000000..07c2b35fc
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-5.0.0.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_10 )
+DISTUTILS_USE_PEP517=hatchling
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="https://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="dicom"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
+	dev-python/scipy[${PYTHON_USEDEP}]
+	dicom? (
+		dev-python/pillow[${PYTHON_USEDEP}]
+		sci-libs/pydicom
+	)
+"
+
+BDEPEND="test? (
+	dev-python/pytest-httpserver[${PYTHON_USEDEP}]
+)"
+
+distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
+distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-05-02 23:48 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-05-02 23:48 UTC (permalink / raw
  To: gentoo-commits

commit:     b35196f8ab2d440e2fe298e7ba947eabe9904de9
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Tue May  2 23:47:52 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Tue May  2 23:47:52 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=b35196f8

sci-libs/nibabel: drop 3.2.1

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-3.2.1.ebuild | 41 -----------------------------------
 1 file changed, 41 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-3.2.1.ebuild b/sci-libs/nibabel/nibabel-3.2.1.ebuild
deleted file mode 100644
index 97adfa2da..000000000
--- a/sci-libs/nibabel/nibabel-3.2.1.ebuild
+++ /dev/null
@@ -1,41 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_10 )
-DISTUTILS_USE_SETUPTOOLS=rdepend
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="https://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="dicom"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/packaging[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dicom? (
-		dev-python/pillow[${PYTHON_USEDEP}]
-		sci-libs/pydicom
-	)
-"
-
-BDEPEND="test? (
-	dev-python/pytest-doctestplus[${PYTHON_USEDEP}]
-)"
-
-EPYTEST_DESELECT=(
-	# Re-evaluate after 3.2.1
-	nibabel/gifti/tests/test_parse_gifti_fast.py::test_parse_dataarrays
-)
-
-distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
-distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-05-02 23:48 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-05-02 23:48 UTC (permalink / raw
  To: gentoo-commits

commit:     c3df4ab6e2c4549a2d00a05a66d436225291d8b7
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Tue May  2 23:48:31 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Tue May  2 23:48:31 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c3df4ab6

sci-libs/nibabel: enable py3.11

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-4.0.0.ebuild | 4 ++--
 sci-libs/nibabel/nibabel-5.0.0.ebuild | 4 ++--
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-4.0.0.ebuild b/sci-libs/nibabel/nibabel-4.0.0.ebuild
index 2de1e6dc9..4a24fb940 100644
--- a/sci-libs/nibabel/nibabel-4.0.0.ebuild
+++ b/sci-libs/nibabel/nibabel-4.0.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_10 )
+PYTHON_COMPAT=( python3_{10..11} )
 DISTUTILS_USE_SETUPTOOLS=rdepend
 
 inherit distutils-r1

diff --git a/sci-libs/nibabel/nibabel-5.0.0.ebuild b/sci-libs/nibabel/nibabel-5.0.0.ebuild
index 07c2b35fc..0fec805b1 100644
--- a/sci-libs/nibabel/nibabel-5.0.0.ebuild
+++ b/sci-libs/nibabel/nibabel-5.0.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2022 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_10 )
+PYTHON_COMPAT=( python3_{10..11} )
 DISTUTILS_USE_PEP517=hatchling
 
 inherit distutils-r1


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-12-11 16:55 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-12-11 16:55 UTC (permalink / raw
  To: gentoo-commits

commit:     dd45595b671e57f5093b9cf2b6f76e1b5702a1fa
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Dec 11 16:54:46 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Dec 11 16:54:46 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=dd45595b

sci-libs/nibabel: add 5.1.0

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-5.1.0.ebuild | 35 +++++++++++++++++++++++++++++++++++
 1 file changed, 35 insertions(+)

diff --git a/sci-libs/nibabel/nibabel-5.1.0.ebuild b/sci-libs/nibabel/nibabel-5.1.0.ebuild
new file mode 100644
index 000000000..0fec805b1
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-5.1.0.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{10..11} )
+DISTUTILS_USE_PEP517=hatchling
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="https://nipy.org/nibabel/"
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="dicom"
+
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
+	dev-python/scipy[${PYTHON_USEDEP}]
+	dicom? (
+		dev-python/pillow[${PYTHON_USEDEP}]
+		sci-libs/pydicom
+	)
+"
+
+BDEPEND="test? (
+	dev-python/pytest-httpserver[${PYTHON_USEDEP}]
+)"
+
+distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
+distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-libs/nibabel/
@ 2023-12-11 16:55 Horea Christian
  0 siblings, 0 replies; 31+ messages in thread
From: Horea Christian @ 2023-12-11 16:55 UTC (permalink / raw
  To: gentoo-commits

commit:     499bf5837c56f927845cf6686e1f0db64a00e314
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Dec 11 16:55:10 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Dec 11 16:55:10 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=499bf583

sci-libs/nibabel: drop 4.0.0

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/nibabel/nibabel-4.0.0.ebuild | 37 -----------------------------------
 1 file changed, 37 deletions(-)

diff --git a/sci-libs/nibabel/nibabel-4.0.0.ebuild b/sci-libs/nibabel/nibabel-4.0.0.ebuild
deleted file mode 100644
index 4a24fb940..000000000
--- a/sci-libs/nibabel/nibabel-4.0.0.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..11} )
-DISTUTILS_USE_SETUPTOOLS=rdepend
-
-inherit distutils-r1
-
-DESCRIPTION="Access a cacophony of neuro-imaging file formats"
-HOMEPAGE="https://nipy.org/nibabel/"
-SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="dicom"
-
-RDEPEND="
-	dev-python/numpy[${PYTHON_USEDEP}]
-	dev-python/packaging[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dicom? (
-		dev-python/pillow[${PYTHON_USEDEP}]
-		sci-libs/pydicom
-	)
-"
-
-EPYTEST_DESELECT=(
-	# Rported upstream:
-	# https://github.com/nipy/nibabel/issues/1191
-	nibabel/tests/test_volumeutils.py::test_a2f_nan2zero_range
-)
-
-distutils_enable_sphinx doc/source dev-python/texext dev-python/numpydoc dev-python/matplotlib
-distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 31+ messages in thread

end of thread, other threads:[~2023-12-11 16:55 UTC | newest]

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2017-08-25  4:04 Benda XU
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