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From: "Michał Górny" <mgorny@gentoo.org>
To: gentoo-commits@lists.gentoo.org
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Message-ID: <1699691736.e60b23c47007a2bf3669f03caec0e3d95b8ecc4b.mgorny@gentoo>
Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/pandas/
X-VCS-Repository: repo/gentoo
X-VCS-Files: dev-python/pandas/Manifest dev-python/pandas/pandas-2.1.3.ebuild
X-VCS-Directories: dev-python/pandas/
X-VCS-Committer: mgorny
X-VCS-Committer-Name: Michał Górny
X-VCS-Revision: e60b23c47007a2bf3669f03caec0e3d95b8ecc4b
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Date: Sat, 11 Nov 2023 08:35:44 +0000 (UTC)
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commit: e60b23c47007a2bf3669f03caec0e3d95b8ecc4b
Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Sat Nov 11 06:23:04 2023 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sat Nov 11 08:35:36 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e60b23c4
dev-python/pandas: Bump to 2.1.3
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
dev-python/pandas/Manifest | 1 +
dev-python/pandas/pandas-2.1.3.ebuild | 216 ++++++++++++++++++++++++++++++++++
2 files changed, 217 insertions(+)
diff --git a/dev-python/pandas/Manifest b/dev-python/pandas/Manifest
index b7c0dda3d740..408349fbf7e5 100644
--- a/dev-python/pandas/Manifest
+++ b/dev-python/pandas/Manifest
@@ -1,3 +1,4 @@
DIST pandas-1.5.3.tar.gz 5203060 BLAKE2B 846a6caa8ead6a2556303494f92e2091582d8fcde2aee424fa172c4e29c189a7305261f6a931a20249e969668646ff4a3d605ee1b57785fa3677dfbd137b3602 SHA512 3c725c33dcaf78b952d2eb966ced73ff0073162a01d3cbcb722d58d8f12a82163e6e684c27284c735bdfb32dea263b960f70f6a80ff93e6b316316d40835ae35
DIST pandas-2.1.1.tar.gz 4266250 BLAKE2B 9d8256300db65b606e34b16d7f3884b602794fe3c14d66115056db4a4658603fbe7a7a3082dfc781760517d643d6e21a6d4d43441131ec6aed5965b6fa8a0e9c SHA512 346e13e06805948c569712028c9b8d756c67ca2fab040999a51a4e759206d50d8ee25be38ac3c7cb3d2e692a02d85c1ec198841311fe43cb04b64f2741627a4e
DIST pandas-2.1.2.tar.gz 4271419 BLAKE2B 2f22035c9b7d6a0403b28ebe506550328e096f0ed87984dba28d2f49950393ed8a5a3c0c71c5391385d9f5361319431d5de3736f7381eb7670045415b05137a7 SHA512 dad04f1fcc5a59485c34ebfed0698fd47ad9eeffafaddf91642c084f4ffde8a55ce543f9dadb6e7a5066b1809489961d34fe3fe8860f64f9bd2d90b445d92063
+DIST pandas-2.1.3.tar.gz 4272855 BLAKE2B 73717926bb0af44acb9a2d12964df7bf70affd61ca19468b3af4376f9c8084d3612895a9ac5117be97658fd5b7ff0275cd7b2c6f1b9b0e00afb951fd50a1f103 SHA512 71012b47b76444e19507e444c8ef88497e3b286856690216886cbb67ad70786c2f5014a7cf6c89f8378769560109fb5593a8c82c21a034a1059769e15c843b92
diff --git a/dev-python/pandas/pandas-2.1.3.ebuild b/dev-python/pandas/pandas-2.1.3.ebuild
new file mode 100644
index 000000000000..ce640ccbe7b3
--- /dev/null
+++ b/dev-python/pandas/pandas-2.1.3.ebuild
@@ -0,0 +1,216 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_EXT=1
+DISTUTILS_USE_PEP517=meson-python
+PYTHON_COMPAT=( python3_{10..12} )
+PYTHON_REQ_USE="threads(+)"
+
+VIRTUALX_REQUIRED="manual"
+
+inherit distutils-r1 multiprocessing optfeature pypi virtualx
+
+DESCRIPTION="Powerful data structures for data analysis and statistics"
+HOMEPAGE="
+ https://pandas.pydata.org/
+ https://github.com/pandas-dev/pandas/
+ https://pypi.org/project/pandas/
+"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~arm ~arm64 ~hppa ~riscv ~sparc ~x86"
+IUSE="full-support minimal test X"
+RESTRICT="!test? ( test )"
+
+RECOMMENDED_DEPEND="
+ >=dev-python/bottleneck-1.3.4[${PYTHON_USEDEP}]
+ >=dev-python/numexpr-2.8.0[${PYTHON_USEDEP}]
+"
+
+# TODO: add pandas-gbq to the tree
+# TODO: Re-add dev-python/statsmodel[python3_11] dep once it supports python3_11
+# https://github.com/statsmodels/statsmodels/issues/8287
+OPTIONAL_DEPEND="
+ >=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
+ dev-python/blosc[${PYTHON_USEDEP}]
+ >=dev-python/html5lib-1.1[${PYTHON_USEDEP}]
+ >=dev-python/jinja-3.1.2[${PYTHON_USEDEP}]
+ >=dev-python/lxml-4.8.0[${PYTHON_USEDEP}]
+ >=dev-python/matplotlib-3.6.1[${PYTHON_USEDEP}]
+ >=dev-python/openpyxl-3.0.7[${PYTHON_USEDEP}]
+ >=dev-python/sqlalchemy-1.4.36[${PYTHON_USEDEP}]
+ >=dev-python/tables-3.7.0[${PYTHON_USEDEP}]
+ >=dev-python/tabulate-0.8.10[${PYTHON_USEDEP}]
+ >=dev-python/xarray-2022.3.0[${PYTHON_USEDEP}]
+ >=dev-python/xlrd-2.0.1[${PYTHON_USEDEP}]
+ >=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
+ >=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}]
+ !hppa? (
+ $(python_gen_cond_dep '
+ dev-python/statsmodels[${PYTHON_USEDEP}]
+ ' python3_{8..10} )
+ >=dev-python/scipy-1.8.1[${PYTHON_USEDEP}]
+ )
+ X? (
+ || (
+ >=dev-python/PyQt5-5.15.6[${PYTHON_USEDEP}]
+ >=dev-python/QtPy-2.2.0[${PYTHON_USEDEP}]
+ x11-misc/xclip
+ x11-misc/xsel
+ )
+ )
+"
+DEPEND="
+ >=dev-python/numpy-1.23.2[${PYTHON_USEDEP}]
+"
+COMMON_DEPEND="
+ ${DEPEND}
+ >=dev-python/python-dateutil-2.8.2[${PYTHON_USEDEP}]
+ >=dev-python/pytz-2020.1[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ ${COMMON_DEPEND}
+ >=dev-util/meson-1.2.1
+ >=dev-python/cython-0.29.33[${PYTHON_USEDEP}]
+ >=dev-python/versioneer-0.28[${PYTHON_USEDEP}]
+ test? (
+ ${VIRTUALX_DEPEND}
+ ${RECOMMENDED_DEPEND}
+ ${OPTIONAL_DEPEND}
+ >=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
+ >=dev-python/hypothesis-6.46.1[${PYTHON_USEDEP}]
+ >=dev-python/openpyxl-3.0.10[${PYTHON_USEDEP}]
+ >=dev-python/pymysql-1.0.2[${PYTHON_USEDEP}]
+ >=dev-python/pytest-7.3.2[${PYTHON_USEDEP}]
+ >=dev-python/pytest-xdist-2.2.0[${PYTHON_USEDEP}]
+ >=dev-python/psycopg-2.9.3:2[${PYTHON_USEDEP}]
+ >=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
+ x11-misc/xclip
+ x11-misc/xsel
+ )
+"
+RDEPEND="
+ ${COMMON_DEPEND}
+ dev-python/tzdata[${PYTHON_USEDEP}]
+ !minimal? ( ${RECOMMENDED_DEPEND} )
+ full-support? ( ${OPTIONAL_DEPEND} )
+"
+
+PATCHES=(
+ # a quick hack, it's already fixed in main
+ "${FILESDIR}/pandas-2.1.1-which.patch"
+)
+
+src_test() {
+ virtx distutils-r1_src_test
+}
+
+python_test() {
+ local EPYTEST_DESELECT=(
+ # test for rounding errors, fails if we have better precision
+ # e.g. on amd64 with FMA or on arm64
+ # https://github.com/pandas-dev/pandas/issues/38921
+ tests/window/test_rolling.py::test_rolling_var_numerical_issues
+
+ # TODO; unhappy about DISPLAY?
+ tests/test_downstream.py::test_seaborn
+
+ # OOMs
+ tests/io/parser/test_c_parser_only.py::test_bytes_exceed_2gb
+
+ # TODO: numexpr says "forbidden control characters"
+ tests/computation/test_eval.py::TestOperations::test_multi_line_expression_local_variable
+ 'tests/computation/test_eval.py::test_query_token[numexpr-Temp(\xb0C)]'
+ tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_lots_of_operators_string
+ tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_multiple_spaces
+ tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_parenthesis
+ tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_start_with_spaces
+ tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_syntax
+ tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_variable_with_in
+ tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_nested_scope
+ tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_query_scope
+
+ # TODO: missing data not covered by --no-strict-data-files?
+ tests/io/xml/test_xml.py::test_empty_stylesheet
+ tests/io/xml/test_xml.py::test_wrong_file_path
+
+ # TODO
+ tests/frame/test_arithmetic.py::TestFrameFlexArithmetic::test_floordiv_axis0_numexpr_path
+
+ # deprecation warning
+ tests/io/pytables/test_retain_attributes.py::test_retain_index_attributes2
+
+ # Needs 64-bit time_t (TODO: split into 32-bit arch only section)
+ tests/tseries/offsets/test_year.py::test_add_out_of_pydatetime_range
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessDay]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessHour]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthBegin]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterBegin]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessDay]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessHour]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthBegin]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthBegin]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthBegin]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-QuarterEnd]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-LastWeekOfMonth]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-WeekOfMonth]'
+ 'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-Week]'
+
+ # hdf / pytables have alignment problems: bug #911660
+ # https://github.com/pandas-dev/pandas/issues/54396
+ tests/io/pytables/test_append.py::test_append_frame_column_oriented
+ tests/io/pytables/test_store.py::test_select_filter_corner
+
+ # blosc2 version
+ tests/io/pytables/test_file_handling.py::test_complibs\[blosc2-{1..9}\]
+ )
+
+ case ${EPYTHON} in
+ python3.12)
+ EPYTEST_DESELECT+=(
+ tests/io/pytables/test_select.py::test_select_dtypes
+ tests/io/pytables/test_select.py::test_frame_select
+ # deprecation warnings
+ tests/io/excel/test_writers.py::TestRoundTrip::test_read_excel_parse_dates
+ )
+ ;;
+ esac
+
+ local -x LC_ALL=C.UTF-8
+ cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
+ "${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
+ # --no-strict-data-files is necessary since upstream prevents data
+ # files from even being included in GitHub archives, sigh
+ # https://github.com/pandas-dev/pandas/issues/54907
+ epytest pandas/tests \
+ --no-strict-data-files \
+ --maxfail=32 \
+ -m "not single and not slow and not network" \
+ -n "$(makeopts_jobs)" --dist=worksteal ||
+ die "Tests failed with ${EPYTHON}"
+ rm test-data.xml || die
+}
+
+pkg_postinst() {
+ optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
+ optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1"
+ optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup4 dev-python/html5lib dev-python/lxml
+ optfeature "for msgpack compression using blosc" dev-python/blosc
+ optfeature "Template engine for conditional HTML formatting" dev-python/jinja
+ optfeature "Plotting support" dev-python/matplotlib
+ optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.10" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
+ optfeature "necessary for HDF5-based storage" ">=dev-python/tables-3.7.0"
+ optfeature "R I/O support" dev-python/rpy
+ optfeature "Needed for parts of pandas.stats" dev-python/statsmodels
+ optfeature "SQL database support" ">=dev-python/sqlalchemy-1.4.36"
+ optfeature "miscellaneous statistical functions" dev-python/scipy
+ optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/QtPy dev-python/pygtk x11-misc/xclip x11-misc/xsel
+}